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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:679650..682620+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037263 ID=XLOC_037263|Name=XLOC_037263|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2971bp|location=Sequence derived from alignment at sc0000120_pilon:679650..682620+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCTAAAAGAGCTAATGCAACTGCTTCTACAAGGCTAAGGCAGGA
TTATATGCGCATTAAGAAAGATCCTGTTCCATACATAATTGGAGCAGAAC
CTTTGCCTTCAAATATCCTGGAATGgtaagttgtattttttatttatttt
tttggctgttttACAGTTGTCTTCagaattgaaagccaaaatgtAATGTT
TTAAGTTGCTTTTAATAGTTCTTCTTTGTACATTGTACATGTCATATGAT
ATTTATTGTGCTGGAAAGCTGGAATGGCTGCAatgtttcattttgaatat
attcAAGTTATTTTTCTGTCCAATCCAATGGCATAAAGTGgactttgaaa
tgaaaataagttaaccatttttttttaattgaatatttttacaGGATAGA
GCAGACAGTTACAAATAACTGATATTACTATATTGGTCCTGACTTAAAAT
AAACTAATAAATTTATGATGATAAATGACTCTTTACCCCAGGCTATAAAT
AATGCCAAAACACACACAAATTGCCAAATTAACTTGAAATCATTCATGAA
AAGCTGAATTTAGACTGGTAAAAAATTGTTGACAATTTCATTGAAgactg
tttttttaatgaagttTTGGACGTGAAGcaaaaatatagtttttttcATA
TTCTAATCGTATGTTAAATAAAGTAGAGTAAAAATGGTGCTTTTAGGTTG
TGAatgcaaaattatcaaaatggaCTTTATTATACTAGTCCTTTTAAAAC
GGTATTTATTTCTGAAAAAGGCATAAAAATCGGGGCCAATAAGGGCTGGT
GCGCACTGATTAGTTATATgacaaaacttttattataaTTCTACATCTAG
GCATTATGTAATCAAAGGTCCAGAGAATTCGCTCTATGAAGGTGGGTATT
ACCATGGCAAATTAGtttttccaaaagattttcCTTTCAAACCTCCAAAG
ATTATGATGATGACACCAAATGGAAGATTCAAAACACACACACGGTGAGA
CACGCTTTAATATTATGCAGCTAATTCTTGGTAAAATCAGTGAGCATTCT
TCTGTTACCATTTTTCAGAATACTGAAAAACTCTTCTCTCAAGTTGTTGG
TATGGATATTTAtatccaaaaattttcattactgGAAGTAACTCtttttt
ttATCAGGTTATGTTTATCAATAAGTGACTTTCACCCAGACACTTGGAAT
CCTGCTTGGTCTGTTTCAACGATACTTACAGGACTACTGAGTTTTATGGT
ATCATATTATCcgtatttaaaaattttgagattaacTCTgttgtgttaat
ttttttcaagaatgcaaaaaaatgtatttatttAAACAATGTTGCTTTAC
TCTTAAAGGAGAGATGTTctaagattttgtttttttaagaaaatatgcAA
TGTTTATTATTCTTTTGTACACttattttagctcgagaaagcCCCCACAC
TAGGGAGTATAGAAACAACCGACTATCAGGTAAAACTTTAGCTTCATTTA
TATTGCACTCCCTTTCATCTCAATGTAAATACCTCATTTTCTTCTCTTCA
AAACAGGCTGtagtaaatattttgatgatttttatattttagaaaaaaca
atttgCATTGAACAGTTTGGAATACAATTTGAAAGATAAAACATTCACTG
AACTTTTTCCTGATATATGCAAAGTAAGCACGTTTCGTTTCATTATATTA
CTCTGTTCCTGTCTCCTCTAGGTtatgtcatatcttccttcgtttcgagc
ttaaaactcctactcttcgagtgagacctaaaagcctggagctgtataTT
ATGTAGACTAGTCTCCTctaattgtttgaaaaatattcattttgttCACA
CTGGTAcaggggggtcagtgtaccagagcagaaggtggcatgtatcctgg
ggtgggtgggtgtttgagaaaaaatttgtcatgtactacctgtgtactat
aattggggtgttgggtccaaaatcgatgttaACAGTATGGAAACAAAAGG
TTCAGAAATaattatctgctaaaatagaaatgtaaagttgttctaattat
aaattgatcaagccaagtttgtccaagatcattcttccagacttcttgga
atgaattgaaatcctaccagATTCCATTAAATGAAGGCTTATGTAAAcat
gtaaacattcgaacatttgaattcaaaGATTCGAACATtcgaggtgccaa
ctctcacgcattgggtgtgagactcacacatttccacatggtctcacgca
atttttgaaaagtttgatttctcacgcattttggatttttgagaaaaatg
ttcctgtttttccgatttttggaaaaaagttttcccgatttcccgatttt
tgtaaaaatgtttactcgattttctaattttttccagGTAGTACCCGGTA
GTAAATGGGGGAGTATAATGAggtggttttggtttttttccaggtactac
ccggtagtaaataaggggtatggggtggttttgggatttttccattggtg
tacttcaggggtgggtgggtttcaagttttgaaaaataccttatagtaca
catacatgccgccttctagtacactgaccccccctgactgGTATTTTATT
ATAACAGAATACTAATTAGAAATATGCcttaaaaaaatttgggttattat
tatattaattttcactgaaattttaaggttttttctttAAGTGTGTATAC
CTTGCtttttttACTGTTTGTTAACTTTATTCTTTGGTGACAAAAATAGG
AAATCAAAGAGCTGCTGGATAATCAGAGAGATCAAAATGATCCCAACGAA
GGGACTGCAAATAATGGGGAATTTTTATTACCAAAcgatttaaattctga
aaatgataattttgtaaATGGAAGTACTTTTGCAAACATATGTGTTTTTG
TTGGCTTTGCTGTGTTTGCGCTGGTCGTCAATTACGTCATCAAAGCTGTT
ACTTCTGAAGATGAATTATGA Coding sequence (CDS) from alignment at sc0000120_pilon:679650..682620+ >XLOC_037263 ID=XLOC_037263|Name=XLOC_037263|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1422bp|location=Sequence derived from alignment at sc0000120_pilon:679650..682620+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCTAAAAGAGCTAATGCAACTGCTTCTACAAGGCTAAGGCAGGA
TTATATGCGCATTAAGAAAGATCCTGTTCCATACATAATTGGAGCAGAAC
CTTTGCCTTCAAATATCCTGGAATGATGGCTTCTAAAAGAGCTAATGCAA
CTGCTTCTACAAGGCTAAGGCAGGATTATATGCGCATTAAGAAAGATCCT
GTTCCATACATAATTGGAGCAGAACCTTTGCCTTCAAATATCCTGGAATG
GCATTATGTAATCAAAGGTCCAGAGAATTCGCTCTATGAAGGTGGGTATT
ACCATGGCAAATTAGtttttccaaaagattttcCTTTCAAACCTCCAAAG
ATTATGATGATGACACCAAATGGAAGATTCAAAACACACACACGGCATTA
TGTAATCAAAGGTCCAGAGAATTCGCTCTATGAAGGTGGGTATTACCATG
GCAAATTAGtttttccaaaagattttcCTTTCAAACCTCCAAAGATTATG
ATGATGACACCAAATGGAAGATTCAAAACACACACACGGTTATGTTTATC
AATAAGTGACTTTCACCCAGACACTTGGAATCCTGCTTGGTCTGTTTCAA
CGATACTTACAGGACTACTGAGTTTTATGGTTATGTTTATCAATAAGTGA
CTTTCACCCAGACACTTGGAATCCTGCTTGGTCTGTTTCAACGATACTTA
CAGGACTACTGAGTTTTATGctcgagaaagcCCCCACACTAGGGAGTATA
GAAACAACCGACTATCAGctcgagaaagcCCCCACACTAGGGAGTATAGA
AACAACCGACTATCAGaaaaaacaatttgCATTGAACAGTTTGGAATACA
ATTTGAAAGATAAAACATTCACTGAACTTTTTCCTGATATATGCAAAaaa
aaacaatttgCATTGAACAGTTTGGAATACAATTTGAAAGATAAAACATT
CACTGAACTTTTTCCTGATATATGCAAAGAAATCAAAGAGCTGCTGGATA
ATCAGAGAGATCAAAATGATCCCAACGAAGGGACTGCAAATAATGGGGAA
TTTTTATTACCAAAcgatttaaattctgaaaatgataattttgtaaATGG
AAGTACTTTTGCAAACATATGTGTTTTTGTTGGCTTTGCTGTGTTTGCGC
TGGTCGTCAATTACGTCATCAAAGCTGTTACTTCTGAAGATGAATTATGA
GAAATCAAAGAGCTGCTGGATAATCAGAGAGATCAAAATGATCCCAACGA
AGGGACTGCAAATAATGGGGAATTTTTATTACCAAAcgatttaaattctg
aaaatgataattttgtaaATGGAAGTACTTTTGCAAACATATGTGTTTTT
GTTGGCTTTGCTGTGTTTGCGCTGGTCGTCAATTACGTCATCAAAGCTGT
TACTTCTGAAGATGAATTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:679650..682620 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 490-711:2750 |
| Aaloc | 409-489:1593 |
| Aaloc | 361-408:1432 |
| Aaloc | 271-360:1159 |
| Aaloc | 127-267:852 |
| Aaloc | 1-123:1 |
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