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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:596997..606735+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037261 ID=XLOC_037261|Name=XLOC_037261|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9739bp|location=Sequence derived from alignment at sc0000120_pilon:596997..606735+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGGATTACCACCAGGATGGATAGAAAAGACATCAAATTCAACAGG
AAAGAAATATTATTACAACACACAAACTCAACAGAGTCAATGGGAAAAAC
CAACTGATGATGATGTCAAATCTGTGAGAGCATCACATCTTCTTGTGAAA
CACAACGAATCAAGAAGACCAGCATCCTGGCGACAAGATAAAATCACCAG
GTCTAAAGATGAAGCTTATGAAATAATTGCAGGTAATCAACTGTTTTTGT
GTTACTTGCTCTAGTTTGAATATTCTCtcatagatttttttcagaagact
ctccaaACCTGGTGCTTGTGTTGTGACGACACAGCGGGACGTGCGTCACt
cttgattttgaaaagtgaaCCCTGtaagatatgaatgtttggtaaatttg
ggaccatTTCCCATTTTAAACcttgaaaagtggcaaaaatgacttaaagt
accgtaagttgattaagttgaagttggtttgatattctacgtttgacgtt
tgatattcgtttgatattctcaaatttgcgttttgaagtttttgtgacta
cttttggaactggaaactattggaagccaatagagtttattctcaagggt
gtgtgtgcaaaatttcagcgctctccgtcgcagcgtgctccctctaaaaa
ttggtaaccgtcaaacctcatttcggccgaaatgacaagttgggctcctg
tgggggagagcggttatctttggaactggaaactattggaagccaataga
gtttattctcaagggtgtgtgtgcaaaatttcagcgctctccgtcgcagc
gtgctccctctaaaaattggtaaccgttaaactgccgaaatgacaagttg
ggctcctgtgggggagagcggttatctttggaactggaaactattggaag
ccaatagagcttattctcaagggtgtgtgtgcaaaatttcagcgctctcc
gtcgcagcgtgctccctctaaaaattggtaaccgtcaaacctcatttcgg
ccgaaatgacaagttgggctcctgtgggggagagcggttatctttggaac
tggaaactattagaagccaatagagcttattctcaagggtgtgtgtgcaa
aatttcagcgctctccgtcgcagcgtgctccctctaaaaattggtaaccg
tcaaacctcatttcggccgaaatgacaagttgggctcctgtgggggagag
cggttatctttggaactggaaactaattggaagccaatagagtttgtTGA
AACATCACTCTCCCAtcttcttgttgttgaaacaCCACTCTGTcctcttc
ttgttgttgaaacatcaTCCTGCCCTCCtcttgttgttgaaacatcactc
tcccatctttttgttgttgaaacatcacGGATTTAGGTCGGTGGTGATTG
AAAGTTTGGCTAGGTATCGATTGTACTGTAAGTTAGGTATCGGTTGTACG
TTTATTTATCGGAAATTAGGGTCGGTATCGATTGTAGGTTAGGGTTGGTA
TCGATTGGAAATAACGGATCATTAATCGATCATTTTCTTCGTGTTGAAAC
ATCAGTTGATCTTTCTCTTGTTGTTGAATCATCATTCAGTTTAAATCATG
GTCGGTATTGATAGGAAATTAAGATCGGTAACAATTGAAGAAATGGGTCA
GTTATCAAGTTTTAAAATTTGGACAGTTTGAATCAGGATCAATTGGATAT
AAAATTTAGTAAGTAGGAGCAGGTAACGATTTGAAGTTAAGGTTGGTAAT
AATCGGaaaaaaaGATCGGTAACGATTTGAAGAAGGGTCCGCTTCGATTG
GAAGGAGAAAAGAGTCGGTATCGATTGGAAAAAAGGATCACCAACGTATT
GAAAATTAGGGTCGCTAACGAATAGTGATTTTGAATCATTTATTTCacct
caaatttttgatttgtacAACCTCCACCAATCGAACTTTATTCAATAAGG
TTTAAACAATTATTTTTGACTAAATTTTTACGGCGAAATTTTCATTGTGA
ATACGTCAggcaaattcaaaaaattatgagttttttaaagttattgccga
cccaaaaaaatatcagcgttttgattggtcgagagcatcgagatatttgc
gatatttcatatttctttagtctggaaatatgaccgcgttgacttttggg
ggactgggtaagcggcgggagaaaaatcaaaacaaaacagccgaaaagaa
ctgactttcggagaaactggcttgggaatcaaagggaaaaacgcaacaaa
aatatgttcagattaacttgtactttggagttcttccataaaagacacta
aaatcaaatctgataaactaagaaattgtaaaactacttgacacgaccca
aatattttcagcttttggtataaaattcgtccgtatgtaaccaaacagtt
ttttatcaatgcatacaaaaaacttgagattcttgaatgtttgccagtaa
gatttctcataacatagcaagggaagtggtgatttttgaaaaagttgtct
CCTAATTCTCATTCTTGACGAGGTACGTCCTTGAATTgtaaactcaacaa
tcatttatacatcttccttctaaaattcgaaacaattAaagcttgacgat
aatcaagaaagtatccaaattgttttgctcttgaaaaaatgttgttcttt
aaccattattacaagcatacatttccatcatggaaatcctttcctctgct
attcttttccatgcatcgaaacaaaaacatagaaaaagactgaatgttat
caatctgattaatccaacgATGAAGGGTtccttctctatcgaaacaatac
tgtacaccatctgcattttgaattatcaatctagaaactttcaaatactc
tctgaaaaatctgcaactcttcaaaacaaaacttctcgATCGTTAAATGA
TCGAAAATGctcctctgttttgtttttatgtgAATATTGTCGGCGGGAAC
ATATCGAATGtttattgttcgaatctaacgttcgaattagattttcgaat
aaaaacattcgaaactacacagaagaaagaatcaaggcggaagtaagttt
taaaacaaaaacaaaaagaaatttatatcaggacaatttttttgagtcga
caataaattagttatcacatgacttctcgtgcaatactcgatattttact
cgttccgagattttaccgatatttttcctcgcctaaaggctcggaaaaat
attacggaaaaatctcggaactcgtaaaatatttctcgtattgcactcga
agtcatgcgataactagtacatattattattttgaaactaTAAATTATCG
ACCAAAGCATTTGACAATTCAATTCAAAGATATCACACTTTAAGGACTTT
TCCTAGCCATATTAAGAGAAgactttttttagaatttttgaaaaaaataa
atagatcAGTATTTTCCATACTGATATCCACACAAAATATGAAATACAAA
AAAGGGTTGTCTGGGAAAAAGTAGAGTatcatttttctgaaaaagtttCG
TCCAGGTTTAGTTAACGCCAAAAGTTTTCTTTCCCTCTCAAATGTTTCCA
CCgccagaaaattattttgcgtGTTTCTCCTCGTGTGGatgttgttttgt
gttttggtaATTGTTTGTTACTAAAATGTGATAATGGCATACACATGTTC
ATGTACGCACTTAAATAAACGACAATTTGATTGGAAACATTTGTCTTTTG
GAAATACCTTTTTGAAATAGAGTAGTCTTTGTGTTATCTTTATAAGGTAA
ATTTAATTAAATTGAAATCATCAAGCTTACTGCTTTATTCGCATTGTTGT
TgaaatttctggattttttcatttactcGATTCACGACCCCTTACATTTC
ATTATAAGGAAAATACTTCAAATCAGTTCAAATACGaaaaaaaGGATAAT
GTACTGAaacaacattaaaataaaaatggcgGAGGATTAATTGAAACTTG
ATgggggggATTGagattctcatttttttacaaatgggaatttcaattct
tttgttttcaagtcagataattcagtggggataagaaaaatagtaaatat
tttgcattgaggattgacttatttgattattttcagtggggacaaaattg
aagataaattttccacccaggacgaTAGTTTGGgcaatttttttcagtgg
aaaGGGTTCCCAGTTGGTCTGTGAGAATGGGTTGTTAAGAAGTTTGACTC
GATACTTTTTCCCAAAATCACCGgtgtaatttgaaaaatatatataaata
aaatacaaagaattaGGAATACCTGGAGTATTTTGGCACTTTccaattga
tttttcttttttcttaactttaccCATAACATTAATGATATGATGATTTT
CGTTTATTAATATTCTACATTTTATGCACTGAaataagaaatatgaaaaa
tatcttcAGTTTTTATTCTTAGGTTGTTATCTTTATTCTTAGGTCCACTG
TCAAAAATTACTGATCCCAACACAAAATaagcctaaaataaaaaaatatt
ttctaaaatataattccaaagagCAGAGTCGAACCTTTTCTAAGAagcaa
aatttaaacaaaaaatgacaTTTACACTCTTCAAAATATCCCCATGATAA
AAAGagaataaattaaaataagTTATCTTCAGGCCAGAGGAGTCAAATAT
TTCTTCAAACAAAATAATTAGCACagacccttgagaataaactctattgc
tctctcccacaggagcccaacttgtcatttcggccgtcTCGATTCACGAC
CCCTTACATTTCATTATAAGGAAAATCTTCAATCAGTTCAAATACGaaaa
aaaGGATAATGTACTGAaacaacattaaaataaaatggcGGAGATTAATT
GAAACTTGATgggggggATTGagattctcatttttttacaaatgggaatt
tcaattcttttgttttcaatcagataattcagtggggataagaaaatagt
aaatattttgcattgagattgacttatttgattattttcatggGGACAAA
ATTGAAGAtaaatttccacccaggacgATAGTTTGGGCAtttttttCAGT
GGAAAGGGTTCCCAGTTGGTCTGTGAAATGGGTTGTTAAGAAGTTTTGAC
TCGATACTTTTTCCCAAAATCACCGgtgtaatttgaaaaatataataaat
aaaatacaaagaataggAATACCGGGAGTATTTTGGCACTTTccaatgat
tttcttttttcttaactttaccCATAACATTAATGATATGATGATTTTCG
TTTATTAATATTCTACATTTTATGCACTGAaataagaaatatgaaaaata
tcttcAGTTTTTATTCTTAGGTTTGTTATCTTTATTCTTAGGTCCAACTG
TCAAAATTACTGATCCCAACACAAAATaagcctaaaataaaaaaatattt
tctaaaatataattccaaagagCAGAGTCGAACCTTTTCTAAGAagcaaa
atttaaacAaaaaatgacATTTACACTCTTCAAAATATCCCCATGATAAA
AAGagaataaattaaaataagTTATCTTCAGGCCAGGGAGTCAAATATTC
TTCAAACCACATAGCGCTctcccacaggagcccaacttgtcatttcggcc
cgaaatgaggtttgacggttaccaatttttagagggagcacgctgcgacg
gagagcgctgaattttgcacacacacacttgagaataaactctattggct
tccaatagtttccaattccaaagataaccgctctcccccacaggagccca
acttgtcatttcggccgaaatgaggtttgacggttaccaatttttagagg
gagcacgctgcgacggagagcgctgaaattttgcacacacacccttgaga
ataaactctattggcttccaatagtttccaattccaaagatgaccccTct
cccccacaggagcccaacttgtcatttcggccgaaatgaggtttgacggt
taccaatttttagagggagcacgctgcgacggagagcgctgaaattttgc
acacacacacccttgagaataaactctattggcttccaatagtttccaat
tccaaagataaccgctctcccccacaggagcccaacttgtcatttcggcc
gaaatgaggttttgacggtttaccaatttttagagggagcacgctgcgac
ggagagcgctgaaattttgcacacacacccttgagaataaactctattgg
cttccaatagtttccaattccaaagatgaacCGCTCtccccccacaggag
cccaacttgtcatttcggccgaaatgaggtttgacggttaccaattttta
gagggagcacgctgcgacggagagcgctgaaattttgcacacacaccctt
gagaataactctattggcttccaatagtttccaattccaaagataaccgc
tctccccacaggagcccaacttgtcatttcggccgaaatgaggtttgacg
gttaccaatttttagagggagcacgctgcgacggagagcgctgaaatttt
gcacacacacccttgagaataaactctattggcttccaatagtttccaat
tccaaagataaccgctctcccccacaggagcccaacttgtcatttcggcc
gaaatgaggtttgacggttaccaatttttagagggagcacgctgcgacgg
agagcgctgaaattttgcacacacacccttgagaataaactctattggct
tccaatagttttccaattccaaagataaccgctctcccccacaggagccc
aacttgtcatttcggccgaaatgaggtttgacggttaccaattttttaga
gggagcacgctgcgacggagagcgctgaaattttgcacacacacccttga
gaataaactctattggcttccaatagtttccaattccaaagataaccgct
ctcccccacaggagcccaacttgtcatttcggccgaaatgaggtttgacg
gttaccaatttttagagggagcacgctgcgacggagagcgctgaaatttg
cacacacacccttgagaataaactctattggcttccaatagtttccaatt
ccaaagataaccgctctcccccacaggagcccaacttgtcatttcggccg
aaatgaggtttgacggttaccaatttttagagggagcacgctgcgacgga
gagcgctgaaattttgcacacacacccttgagaataaactctattggctt
ccaatagtttccagttccaaaagtagtcacaaaaacttcaaaacgcaaat
ttgagaatatcaaacgaatatcaaacgaatatcaaacgtcaaacgtagaa
tatcaaaccaacttcAacTTAATCGTAAGTGGTCTAAGCACCATCGTAAA
atgttctgttcgcgtcgcacGGTGGGTTAAAATGCAGCGGGTGGACGGCG
GTCAGAATTCCCGGGTTTTTAAATCGCTTCTGTAAGTCGGGGCAGGTGGT
GAcacaaacaGaataatttttgaatGGCCGCCAGAGCGATCAAGAAAAAA
GCTATACGTCAAAAGAACAATTGCTTTTTCCGGATTTTTCCCCGCATCTC
CGCAacagaaaatcAGgggaaaatATGatGCGGGTgggtgacgcgaatag
aacaattttttgatggccGCCTAATatatatcgacatccctcttctaatt
tcgacaccctttttagagatatgaatagTAGGAAGGTCGGGATCACTGat
acatttacatacatttatttatttacattacatacatttatttatttata
ttagattttaaataaacaaacttttatacataactaacttaaattttaaT
CTATTTATTGCTGACAgcacatttaaaatttttttcatttttgtaatttt
tacgtAGAATTTGCGAGATTAGGCTTAATTGTCTTATGCAAATAcataac
tagaactagaactagaactagaactagatagacaaaagattttttcctcc
ctgatcgctaagcaaaaaagatagtttccatcagcgattccgaccttcat
attattcctatctctaaaaagaGATTTAcaggaaacacatatttggacta
TGTACCCAATGCTGCATGCAAGCAATTAAGCTTAAGTCCTGCTTAAAGGG
GGACAAAACTTACCATGTGGTCAAAGTCTGGTGTTGATAATGTTTAGGGC
TTTCTGGTGCTCATAAGTCACTGGCCATTATCATCAAGGGGGCAGACCTG
GGCAGACCTGTATCTAAGGACAGTTATtaacactaggaaatcaaggtttc
aaaataataacatcaGCCATCTACATAATGTATGTACAACAACAAGATGA
GAGCTCTGAATCAAGTTAGGTCAGTGTATGAGGTCTGCCAATTTTCTGGG
AAATAGCTTCTTtggtggtgcgcggatctaggtagTTGTCTTTTCCCcca
tctttttcttgggaagtttttcttcaaataagtttttgagGTTGGTCCGG
gtcaaatcttttttatctatggctcaaaatggggataatttttcaaagtt
tatttcaaatgttaatttcattaaaaagcaccagtttattttttcacaaa
aCCCTTCAGAAGTTTTGGGGCGCATTCTTTTGCTTGTGGGTCAAGTAAAT
GATAAAGCGCTTTCtgacaattttaaatttttgatatgcatttcGGTGAG
AGAATAGTGTGGCTAACTGAAGGACTATGCCAGTCCCTGTTGTTTCACTA
GAGAAACATATCAGCCCCCTAAAACGCAATTAAAACTGCTGACATTAGCa
aaaaaaGCTTACAATTAAAACTAGTGAAGAGGGACTTTCTGAAATGTTTT
TCCAGTGAGAGACTTGTACTTTTAGGTGTGTGAAAtctagaaagtttttt
ttataatatgaaATGAaccttttgacaaaattttctttaacaaaTTTCAG
GTTATCGAAAAAGAATTACGTCTGGAGagatttcacttgaagattTAGCC
CAAACAGAAAGTGATTGCAGTAGTGCTAAAAAAGGAGGGGATCTTGGATT
CTTTTACCCTGGTCAGATGCAAAGTAAGTTTATCATTCATGATTCAATGC
TGCAATGCTGTTGATACTTTTATAGTTGTTCCAGTGATCTTTTAGATAAC
TgacttttaaatgtttttttcaactaTTTGTGCAAAGAAtagagcaaaaa
aattacatttctggCTTTACaaactttctttataagatCAAGTAAATTTT
AACTGAGGCTCTGCTTTTCTGATTTTATCGCGATCTGAAGGCTTAGATGC
TCGTGGCTTAAAACTAAGATTTATAATAGTAGTTTCTGAAATCTGAAGCT
CTGGTTGTTCTtcatttgttcttaggtttgtGCCAATATTAAACCTCATA
AGCATGaattgttttcttataaaaaacgtacacTATACTAAGAAGGTTTT
CTGAGAAAGAACTTGTCCCATCTTGTCTTGTCCAACGAAACTCGTGGGCC
TGTTGTAAAAACATAAATTTCTAACATCATTTTTGTCATCTTTCTTAGAA
TTTTGACGTATTATTATTGGTGATGAAAGACATTTTTGCTaaacaatgat
aaaaatcaAGTTACAATTGACTTTCTCCATTCGAACGAAATGTATAAATA
CAGAACTAACAGAAGGActgattatttttttcatcttataGAACCATTTG
AAGATGCAACATTCGCTTTGGAGGTCGGAGAATTAAGTGAAGCCATCTCA
ACCGATTCTGGTATTCATCTTATACTACGTACAGGCTGA Coding sequence (CDS) from alignment at sc0000120_pilon:596997..606735+ >XLOC_037261 ID=XLOC_037261|Name=XLOC_037261|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=906bp|location=Sequence derived from alignment at sc0000120_pilon:596997..606735+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGGATTACCACCAGGATGGATAGAAAAGACATCAAATTCAACAGG
AAAGAAATATTATTACAACACACAAACTCAACAGAGTCAATGGGAAAAAC
CAACTGATGATGATGTCAAATCTGTGAGAGCATCACATCTTCTTGTGAAA
CACAACGAATCAAGAAGACCAGCATCCTGGCGACAAGATAAAATCACCAG
GTCTAAAGATGAAGCTTATGAAATAATTGCAGATGTCAGGATTACCACCA
GGATGGATAGAAAAGACATCAAATTCAACAGGAAAGAAATATTATTACAA
CACACAAACTCAACAGAGTCAATGGGAAAAACCAACTGATGATGATGTCA
AATCTGTGAGAGCATCACATCTTCTTGTGAAACACAACGAATCAAGAAGA
CCAGCATCCTGGCGACAAGATAAAATCACCAGGTCTAAAGATGAAGCTTA
TGAAATAATTGCAGGTTATCGAAAAAGAATTACGTCTGGAGagatttcac
ttgaagattTAGCCCAAACAGAAAGTGATTGCAGTAGTGCTAAAAAAGGA
GGGGATCTTGGATTCTTTTACCCTGGTCAGATGCAAAGTTATCGAAAAAG
AATTACGTCTGGAGagatttcacttgaagattTAGCCCAAACAGAAAGTG
ATTGCAGTAGTGCTAAAAAAGGAGGGGATCTTGGATTCTTTTACCCTGGT
CAGATGCAAAAACCATTTGAAGATGCAACATTCGCTTTGGAGGTCGGAGA
ATTAAGTGAAGCCATCTCAACCGATTCTGGTATTCATCTTATACTACGTA
CAGGCTGAAACCATTTGAAGATGCAACATTCGCTTTGGAGGTCGGAGAAT
TAAGTGAAGCCATCTCAACCGATTCTGGTATTCATCTTATACTACGTACA
GGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:596997..606735 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 358-453:9644 |
| Aaloc | 235-354:8903 |
| Aaloc | 1-231:1 |
|
