|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:560687..563869+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037256 ID=XLOC_037256|Name=XLOC_037256|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3183bp|location=Sequence derived from alignment at sc0000120_pilon:560687..563869+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACATGGACAAGATATACCATTAAACATCAATGGAGCCATTGGTGA
TATCAATTCCTCAAAATTATTGAATGGAAGCTACTCCCCTGAAGAACCTG
CCCTTACCAACGGTGACTCTCATGCTACAACGACTACAAGTGAAGATGCT
ACCCCAACCTATGCTGATGCCTTCCCTCCACTCTCTTCATCCTCAGCTGG
CCCTTCAGCCTCTAAACAATCTGTCTGGGCTACAGGTGGTACTGGTGCTG
CAGTCTCCAAAGTTAAACAaccacaaaaacaacaaaagtttatgtCATCT
GACTCAtctcaagttttcaaaatccCTTTTGAAGAAAGACGATTCAAGAA
TTTGACCCCTTTTGTTGGAGATGTTGACAAGCAGAATCAAATAATTTTGG
ATGTGATGCAGAAAACTGGTGCTACTATTGAAGTCAGTGTTACTAAAGAT
CAATGCCTTACAATCATGGTCTCTGGTAAACGAGAAGCTGCCCGTGATGC
TAGAGCACGTATTACAGCTGGTCTGCAAACTCAAGCTAGTATTGAAATGG
TCACCCCAAAGGAACATCACAAATTCATCCTTGGAAAAGGTGGAAAGAGA
CTTCAAGAGTTGGAACTTCTCACCCAAACCAAAATCACCATACCAAAAGA
ATCGGATATAATTCGCATTGTTGGAACAAAAGAAGGCATTGATAGAGCAA
AACATGAAATTCAATTAATTTCTGATGAACaggtaattttgattttctta
ttcATTAATTATGAAAAGAGAATCACTTTAAAAAAGACTAGCTTCTTTGA
TTGAAATCATtgaatttgaaatatcttttctCTCCCTTTTTAGTGTTAAA
tagttcttcttttttcaattatAGGCAAAATTGGCATTTGAGCGCTTGAA
CATTCCCAAGATCTACCACCCATTCATCTGTGGCCCTGATAATGAAAAAG
CAAAGGAAATTGCAAATGCTACAGGTGCTCGAATCAACATCCCTCCTGCT
TCTGTTGAGAAAGATGAAATGACTGTTGCTGGTGAAAAAGATGCTGTACA
AAAAGCCGTTCAAATCATTATGGATATTTACAAAGATAAGGAAAAGAGAA
CAAAGACAGTTTCTGTTGAGGTGAGTTTTAAATGCTCTTTTTGCTTATCT
TGATTACTTTATTTTGGGCCCTTTCAGCTCTGTTTGCTAGGGGTCCAGCT
GATTTGATGGTACACAACAGGCAAGGCTCTTGTAATGTTCCATTTTTGTA
ATTGCCAAAATCCCagtttgatttgattgaaataaTTCATCTTTTAAAAC
ATCTTTTAATGAATTAAGTTGGCTATGAAGGAAGTACTCTTCCCAAATCT
TTAGGTCAAGAAAACCCAACACAAGTATGTTAATGGACCCAGAGGTGCTG
GTATTCAAGACATTTTGCGTACAACTGGTGTTTCAATTGAAATGCCACCT
GCAGGTAGTGACAATGTAACCATCACTCTTCGTGGAGACCCAGACAAACT
TGGAAATGCTTTAACCCTTCTTTATGAAAAGGTGAGTCTCCTACCTTATA
TATCTTTATCAATTCAAAATCTAATTTGTTTAACAAATATTGCGAGcact
tttttcgattttcaaatgCCTTTCAACAATTTGGCCCCAGGATATTCTGT
TGAAGaattatgattttattttcaaataaccATTAAAAAATGACTTTGCT
TCATGCCAAAAGCTCTTTACTCTTAAAAATGATAGGCAAACAGTGTGATC
AGTACTGAGATCAATGCACCAACATGGCTTCATAGATTTATTATTGGTAG
ACAAGGAGCAAACATCAAGAAGATCATTAAGGATTTGGACAACAAGGTTA
GTTACATACATTTTAAATGTATTATTATGGAGCTgtgaaatctaaaaaat
ttcaaCCGTCTAGGCTATACCTTTGAGTGAATCATTATGTTATACACTCT
ACGATACTTGAATCCTGATTTATTACAGCCAAATCTCTCCATGAAACTGA
TATTTTGCCTTTAATGTCCTGTGGCCCCTTTCagctaaaggaagaaattt
attAATATGAGTTACTTTAAAGACATTCGccttttttaaatacttttagG
TACAtgttgaatttgttgaaaacaAGATCATGATTTCTGGACCCCCTACT
GAAGTACAAGCCGCTGAAAACCTTTTGGAATCCTCCCTCAAAGAGCTGGT
AAGTACAATGTCCTTTGTTTATATTTCAACTCGATGTAGCGTTACAAAGA
TAAAGAATATGAAAGGACTCTGAAACGATTCAGAACcctcattttgaaat
aatttttcatcttttttagaaaaacaccATGTCTTACGAAGACATCAAAG
TTGATCAAAAATGGCACAGGCATATCATTGGTAAAGCTGGATCAAACATT
GGTAGAATCAAGAATGAAACCGGTACCTCTATCAATATCCCTTCTgatga
agaaaaatcaaatgtgATTCGTATTGAAGGAAGCCCTGATGGAGTTGCTG
CAGCAAAGAAGGCTATTTTGGATATGGCTAGCAAAATGGTAAGATTTTAT
GAACAGTAAATCCTATTAATAGTAACAAATGTTTGaacaattttgataat
tttaaaccatatttaaagtaatttctttagcaaaacttggaaaaacattt
ttctgcaTTTATAGGACAACGAAAAATCAAGAGACATCATCATTGAAAAC
AAACTCCACAAGAACATTATCGGTCAAAAAGGAGATAAGGTTCGGGAGAT
TCGTGAAAAGTTTCCTGATGTGCAAATCTCTTTTCCTGATGCTGACAAGA
AATCTGATGTTGTTACTTTACGTGGGCCCAAGGAAGATGTTGACAAATGC
TTTAACCACATGAAAAAGTTGGTCACTGAACTTGTTGCTTCAAGCTACAA
ATGTGAAGTGCCCATTATGAAACGTTTCCATGGAAATGTCATTGGACGTG
CTGGTGCCAACATCAAGAAAATCAAGGAAGAAACTGGAACCCAAATCGAT
ATCCCTGCTGAAAATAGTACTAGTGACGTCATCATTGTGACAGGACACAA
AGCTCAAGCTGAAAAAGCAAGAGACATGATTCTGAAGATCCAAAACGAAT
TggtaattttcctttttttctttacctGTGCCTATGGTTCTGGCAATTCG
AAGAAGAATTATTGTGGAGTCCACACTACATAA Coding sequence (CDS) from alignment at sc0000120_pilon:560687..563869+ >XLOC_037256 ID=XLOC_037256|Name=XLOC_037256|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4206bp|location=Sequence derived from alignment at sc0000120_pilon:560687..563869+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACATGGACAAGATATACCATTAAACATCAATGGAGCCATTGGTGA
TATCAATTCCTCAAAATTATTGAATGGAAGCTACTCCCCTGAAGAACCTG
CCCTTACCAACGGTGACTCTCATGCTACAACGACTACAAGTGAAGATGCT
ACCCCAACCTATGCTGATGCCTTCCCTCCACTCTCTTCATCCTCAGCTGG
CCCTTCAGCCTCTAAACAATCTGTCTGGGCTACAGGTGGTACTGGTGCTG
CAGTCTCCAAAGTTAAACAaccacaaaaacaacaaaagtttatgtCATCT
GACTCAtctcaagttttcaaaatccCTTTTGAAGAAAGACGATTCAAGAA
TTTGACCCCTTTTGTTGGAGATGTTGACAAGCAGAATCAAATAATTTTGG
ATGTGATGCAGAAAACTGGTGCTACTATTGAAGTCAGTGTTACTAAAGAT
CAATGCCTTACAATCATGGTCTCTGGTAAACGAGAAGCTGCCCGTGATGC
TAGAGCACGTATTACAGCTGGTCTGCAAACTCAAGCTAGTATTGAAATGG
TCACCCCAAAGGAACATCACAAATTCATCCTTGGAAAAGGTGGAAAGAGA
CTTCAAGAGTTGGAACTTCTCACCCAAACCAAAATCACCATACCAAAAGA
ATCGGATATAATTCGCATTGTTGGAACAAAAGAAGGCATTGATAGAGCAA
AACATGAAATTCAATTAATTTCTGATGAACagATGGAACATGGACAAGAT
ATACCATTAAACATCAATGGAGCCATTGGTGATATCAATTCCTCAAAATT
ATTGAATGGAAGCTACTCCCCTGAAGAACCTGCCCTTACCAACGGTGACT
CTCATGCTACAACGACTACAAGTGAAGATGCTACCCCAACCTATGCTGAT
GCCTTCCCTCCACTCTCTTCATCCTCAGCTGGCCCTTCAGCCTCTAAACA
ATCTGTCTGGGCTACAGGTGGTACTGGTGCTGCAGTCTCCAAAGTTAAAC
AaccacaaaaacaacaaaagtttatgtCATCTGACTCAtctcaagttttc
aaaatccCTTTTGAAGAAAGACGATTCAAGAATTTGACCCCTTTTGTTGG
AGATGTTGACAAGCAGAATCAAATAATTTTGGATGTGATGCAGAAAACTG
GTGCTACTATTGAAGTCAGTGTTACTAAAGATCAATGCCTTACAATCATG
GTCTCTGGTAAACGAGAAGCTGCCCGTGATGCTAGAGCACGTATTACAGC
TGGTCTGCAAACTCAAGCTAGTATTGAAATGGTCACCCCAAAGGAACATC
ACAAATTCATCCTTGGAAAAGGTGGAAAGAGACTTCAAGAGTTGGAACTT
CTCACCCAAACCAAAATCACCATACCAAAAGAATCGGATATAATTCGCAT
TGTTGGAACAAAAGAAGGCATTGATAGAGCAAAACATGAAATTCAATTAA
TTTCTGATGAACagGCAAAATTGGCATTTGAGCGCTTGAACATTCCCAAG
ATCTACCACCCATTCATCTGTGGCCCTGATAATGAAAAAGCAAAGGAAAT
TGCAAATGCTACAGGTGCTCGAATCAACATCCCTCCTGCTTCTGTTGAGA
AAGATGAAATGACTGTTGCTGGTGAAAAAGATGCTGTACAAAAAGCCGTT
CAAATCATTATGGATATTTACAAAGATAAGGAAAAGAGAACAAAGACAGT
TTCTGTTGAGGCAAAATTGGCATTTGAGCGCTTGAACATTCCCAAGATCT
ACCACCCATTCATCTGTGGCCCTGATAATGAAAAAGCAAAGGAAATTGCA
AATGCTACAGGTGCTCGAATCAACATCCCTCCTGCTTCTGTTGAGAAAGA
TGAAATGACTGTTGCTGGTGAAAAAGATGCTGTACAAAAAGCCGTTCAAA
TCATTATGGATATTTACAAAGATAAGGAAAAGAGAACAAAGACAGTTTCT
GTTGAGGTCAAGAAAACCCAACACAAGTATGTTAATGGACCCAGAGGTGC
TGGTATTCAAGACATTTTGCGTACAACTGGTGTTTCAATTGAAATGCCAC
CTGCAGGTAGTGACAATGTAACCATCACTCTTCGTGGAGACCCAGACAAA
CTTGGAAATGCTTTAACCCTTCTTTATGAAAAGGTCAAGAAAACCCAACA
CAAGTATGTTAATGGACCCAGAGGTGCTGGTATTCAAGACATTTTGCGTA
CAACTGGTGTTTCAATTGAAATGCCACCTGCAGGTAGTGACAATGTAACC
ATCACTCTTCGTGGAGACCCAGACAAACTTGGAAATGCTTTAACCCTTCT
TTATGAAAAGGCAAACAGTGTGATCAGTACTGAGATCAATGCACCAACAT
GGCTTCATAGATTTATTATTGGTAGACAAGGAGCAAACATCAAGAAGATC
ATTAAGGATTTGGACAACAAGGCAAACAGTGTGATCAGTACTGAGATCAA
TGCACCAACATGGCTTCATAGATTTATTATTGGTAGACAAGGAGCAAACA
TCAAGAAGATCATTAAGGATTTGGACAACAAGGTACAtgttgaatttgtt
gaaaacaAGATCATGATTTCTGGACCCCCTACTGAAGTACAAGCCGCTGA
AAACCTTTTGGAATCCTCCCTCAAAGAGCTGGTACAtgttgaatttgttg
aaaacaAGATCATGATTTCTGGACCCCCTACTGAAGTACAAGCCGCTGAA
AACCTTTTGGAATCCTCCCTCAAAGAGCTGaaaaacaccATGTCTTACGA
AGACATCAAAGTTGATCAAAAATGGCACAGGCATATCATTGGTAAAGCTG
GATCAAACATTGGTAGAATCAAGAATGAAACCGGTACCTCTATCAATATC
CCTTCTgatgaagaaaaatcaaatgtgATTCGTATTGAAGGAAGCCCTGA
TGGAGTTGCTGCAGCAAAGAAGGCTATTTTGGATATGGCTAGCAAAATGa
aaaacaccATGTCTTACGAAGACATCAAAGTTGATCAAAAATGGCACAGG
CATATCATTGGTAAAGCTGGATCAAACATTGGTAGAATCAAGAATGAAAC
CGGTACCTCTATCAATATCCCTTCTgatgaagaaaaatcaaatgtgATTC
GTATTGAAGGAAGCCCTGATGGAGTTGCTGCAGCAAAGAAGGCTATTTTG
GATATGGCTAGCAAAATGGACAACGAAAAATCAAGAGACATCATCATTGA
AAACAAACTCCACAAGAACATTATCGGTCAAAAAGGAGATAAGGTTCGGG
AGATTCGTGAAAAGTTTCCTGATGTGCAAATCTCTTTTCCTGATGCTGAC
AAGAAATCTGATGTTGTTACTTTACGTGGGCCCAAGGAAGATGTTGACAA
ATGCTTTAACCACATGAAAAAGTTGGTCACTGAACTTGTTGCTTCAAGCT
ACAAATGTGAAGTGCCCATTATGAAACGTTTCCATGGAAATGTCATTGGA
CGTGCTGGTGCCAACATCAAGAAAATCAAGGAAGAAACTGGAACCCAAAT
CGATATCCCTGCTGAAAATAGTACTAGTGACGTCATCATTGTGACAGGAC
ACAAAGCTCAAGCTGAAAAAGCAAGAGACATGATTCTGAAGATCCAAAAC
GAATTggtaattttcctttttttctttacctGTGCCTATGGTTCTGGCAA
TTCGAAGAAGAATTATTGTGGAGTCCACACTACATAAGACAACGAAAAAT
CAAGAGACATCATCATTGAAAACAAACTCCACAAGAACATTATCGGTCAA
AAAGGAGATAAGGTTCGGGAGATTCGTGAAAAGTTTCCTGATGTGCAAAT
CTCTTTTCCTGATGCTGACAAGAAATCTGATGTTGTTACTTTACGTGGGC
CCAAGGAAGATGTTGACAAATGCTTTAACCACATGAAAAAGTTGGTCACT
GAACTTGTTGCTTCAAGCTACAAATGTGAAGTGCCCATTATGAAACGTTT
CCATGGAAATGTCATTGGACGTGCTGGTGCCAACATCAAGAAAATCAAGG
AAGAAACTGGAACCCAAATCGATATCCCTGCTGAAAATAGTACTAGTGAC
GTCATCATTGTGACAGGACACAAAGCTCAAGCTGAAAAAGCAAGAGACAT
GATTCTGAAGATCCAAAACGAATTggtaattttcctttttttctttacct
GTGCCTATGGTTCTGGCAATTCGAAGAAGAATTATTGTGGAGTCCACACT
ACATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:560687..563869 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1585-2103:2665 |
| Aaloc | 1366-1584:2320 |
| Aaloc | 1267-1365:2100 |
| Aaloc | 1156-1266:1736 |
| Aaloc | 979-1155:1355 |
| Aaloc | 733-978:875 |
| Aaloc | 1-732:1 |
|
