XLOC_037228 (mRNA) -

Overview
NameXLOC_037228
Unique NameXLOC_037228
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000145_pilon:216023..217049-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037228 ID=XLOC_037228|Name=XLOC_037228|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1027bp|location=Sequence derived from alignment at sc0000145_pilon:216023..217049- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAGCCAGCCAAGCAACTTGGATCAAAAAAGATAGCAAATTCCCT GAGACGAAATATATTACCATTGGTAAGTTTTAAACATTTTTTTCCAATAT TTGCACTGATTTTATTTATTTTCTTCCGTTTGATATTTGTTGAAAATTGT GAAAGAATTCGATTGAAAAGATCCAAAAGATCATTGAGATAATCAATTAA ATAATTTATTTTCAGATATCGGATCGAGACTCGTGCTTGTCGTGTCGAGC GTTTGTCTACGTTGAAGACAGGCAGGATGATAATGAAAACCTACCAGAAC AAAGGGTAAAACTCGACAAGAAATTGCAAACAAGCAGTGGTATAAAATTC TCTTTATCCTGTATAAGCGGTACCACGTCGAATGGACATGGCAGCGAAGT CATCAGACCGTGCATTTCTTATTTCATTTGTTTTGATAAGAACACTGACG AAGAAGCTGTTTTTTCGTTATTCCATGATAACGAAATGGATCCAACAGTA AAAAAGATCGGAAAAAGTGACAACAAAAAGAACAAGGATGATATTTTGAA AGAATTGGCAATCGTTTTAAAGGTAATTTTTTAATGGTTTTTAACGGCAA GTTTGATTGTTTCGTGTGGTTTCAGTATGGATCTTTAAATTTTGAAAAGC CTTGACTTGAATTGATTTTGCTTGTCAGTTTTAAGAGTTTATAACCAAAC TATAACCAAAATGTTGTGTAGAGGGACTTATATCAATTTTTTAAAGTTTA CAGATTCGCAACTGTTCGTTTTCAGGATCACAACAGCGCGTATGCCAGAA ACATAATGGAAAATCCGACAAACATCCAACAGAACAGCAAACAGCCAGCA AAAAACCCCGAAGAATTATATCCTTGTAGAATGTTTGCAAATCAGACACT TGGTGGAAATGTTACTAATGCCGTTACCAATCTCAAAATTCAAGGCTGCC TCAACGTAAAATTTGAAAATTCGTTTTCAGTGGTACCAGAAGTTACTCAA AATAATCAACAAAACGACTTGGAGCAT

Coding sequence (CDS) from alignment at sc0000145_pilon:216023..217049-

>XLOC_037228 ID=XLOC_037228|Name=XLOC_037228|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0000145_pilon:216023..217049- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAGCCAGCCAAGCAACTTGGATCAAAAAAGATAGCAAATTCCCT
GAGACGAAATATATTACCATTGATGGTCAAGCCAGCCAAGCAACTTGGAT
CAAAAAAGATAGCAAATTCCCTGAGACGAAATATATTACCATTGATATCG
GATCGAGACTCGTGCTTGTCGTGTCGAGCGTTTGTCTACGTTGAAGACAG
GCAGGATGATAATGAAAACCTACCAGAACAAAGGGTAAAACTCGACAAGA
AATTGCAAACAAGCAGTGGTATAAAATTCTCTTTATCCTGTATAAGCGGT
ACCACGTCGAATGGACATGGCAGCGAAGTCATCAGACCGTGCATTTCTTA
TTTCATTTGTTTTGATAAGAACACTGACGAAGAAGCTGTTTTTTCGTTAT
TCCATGATAACGAAATGGATCCAACAGTAAAAAAGATCGGAAAAAGTGAC
AACAAAAAGAACAAGGATGATATTTTGAAAGAATTGGCAATCGTTTTAAA
GATATCGGATCGAGACTCGTGCTTGTCGTGTCGAGCGTTTGTCTACGTTG
AAGACAGGCAGGATGATAATGAAAACCTACCAGAACAAAGGGTAAAACTC
GACAAGAAATTGCAAACAAGCAGTGGTATAAAATTCTCTTTATCCTGTAT
AAGCGGTACCACGTCGAATGGACATGGCAGCGAAGTCATCAGACCGTGCA
TTTCTTATTTCATTTGTTTTGATAAGAACACTGACGAAGAAGCTGTTTTT
TCGTTATTCCATGATAACGAAATGGATCCAACAGTAAAAAAGATCGGAAA
AAGTGACAACAAAAAGAACAAGGATGATATTTTGAAAGAATTGGCAATCG
TTTTAAAGGATCACAACAGCGCGTATGCCAGAAACATAATGGAAAATCCG
ACAAACATCCAACAGAACAGCAAACAGCCAGCAAAAAACCCCGAAGAATT
ATATCCTTGTAGAATGTTTGCAAATCAGACACTTGGTGGAAATGTTACTA
ATGCCGTTACCAATCTCAAAATTCAAGGCTGCCTCAACGTAAAATTTGAA
AATTCGTTTTCAGTGGTACCAGAAGTTACTCAAAATAATCAACAAAACGA
CTTGGAGCATGATCACAACAGCGCGTATGCCAGAAACATAATGGAAAATC
CGACAAACATCCAACAGAACAGCAAACAGCCAGCAAAAAACCCCGAAGAA
TTATATCCTTGTAGAATGTTTGCAAATCAGACACTTGGTGGAAATGTTAC
TAATGCCGTTACCAATCTCAAAATTCAAGGCTGCCTCAACGTAAAATTTG
AAAATTCGTTTTCAGTGGTACCAGAAGTTACTCAAAATAATCAACAAAAC
GACTTGGAGCAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037228XLOC_037228-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000145_pilongenomesc0000145_pilon:216023..217049 -
Properties
Property NameValue
Aaloc427-678:253
Aaloc133-426:750
Aaloc73-132:813
Aaloc1-72:1028