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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:644039..650431+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037210 ID=XLOC_037210|Name=XLOC_037210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6393bp|location=Sequence derived from alignment at sc0000084_pilon:644039..650431+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTGTGAGGTGTATCCTGACCAAACACAACAACAAAAGATCCAAAG
CCTTCAACATTCCATTGCATTCTTACAATCACAACACGCAACAACTTTGA
GCTCCTTGCATCAAGAGATCGAAAGGCTACAGAAGAAATGCAAAGGTACa
tccttttttaaaaaaagcaaaatattttgtgtTTCTATGATAATATTGTT
ATAGTTAACTTACTAACTACCACAATTCGGACATCCCCCTTCTTaagctt
gaaaattttcctCATAAGCAGGGAATTGTGATTGTTTACCTTTTAAATCC
GAGTGACTTTGTGCGACTAGCAATAACTCATTTAAAgcaatttgaaaaac
aattaaAGTCTAATATGTGAGTAGATAAGATCAATTAAAACTGAGTGGAG
AGTatttttcaaactgaaaatataCGAAAACTGTAATGTCTTAATGTTTC
ATTTAATTTCTGAATTTTGTGGCTCCAATTGGCTTGATTTGCTCTTCTGT
AAATGTGTGTTTACATTAGGACTAAAACTGTAGGACttacaaactttttc
aaatttatctgaACATATTGTATTCCCAGGTGCCTAGTAAGGCCTATCCc
cccacttgttaatttttcaattttttccaaccccttGACCTTATTATAGG
ACACCCCCCTCccgttttttaattttgagacCAATTTCAGTTGTCAAAGT
CTCTTATTTATCTCTAAATAGGCAGGTTTTGGTCTATAATTATGTCTCCT
TCTTGGGTATTTAGAGGTATGATTTCCAACCACCCCTCCCTCACTTATTG
AAATTTGCAAATTTTCCCAACCCCCGTTTATTCTGAcccccccctccccc
ATTTATTTGGCACCTGAGAGTATGTTCCTTTTGACAGCTaatttgttgtg
ttttttttttcaagtcaaaattttcttgttgaTCTTCAATGTCTTCAAAC
CTATTTACAGTATAAAAGTTTGTGTTCTTCTAAGCCAACAAGGTTGTTGT
ATTGCATAACCTTAatccttttaaattttcactGATTTATTTTTAGATCT
AACAAATCAAGTAACACTATCAGTACCCTCGTCTGAAGTTGTACCTTGTT
CAGGTTTGTTCATTTTTGTTAGATTCTATTTAAAAGCCTCTCTTAGTAGA
GAGCAAACCCTGATGATCCTTAGCATCTTTGTTGGACGCAACTGCATGTG
ATTGGGTCAATAAAgatatgatttttaaatttcaattaagTTTTTGAGGG
GGCCTGCGAATTAGGcctggcaaaattttttatagCCaaaaaaactgacg
ctgtaggcaaaactcctaaacccataaaaaagggaaaaaattgacgattt
ttcaaagttgaattaaacgaaaatgattaaTACCATcggatagagcatga
aattttgagcaaaaaattgtaCTACAACAAGTCTAAAACGTAACAGATCT
GTTTTCCATCAAAAGATGTTATGGTTCATAAACGTTGGCCCTCTACTACC
TTACCTTTTTATCAGACTTttatcgtcaacatgaaaatatgagcaatcta
attggcttaaaaaacgcgttcataaatgctgtatttcatattttaccgta
caaatacaagactgCGTTCAAAAtaggggtctggtaagcgagagatcaAT
TTTGTACACTATCctcaaatgttttcttttcattcataATAGAATAATAC
ACAACATGTTTCAAAAGAGTTATGAAAAGAatgttttcatctttttttat
gACCGTTCAATATTGTACTCTGTACTGTGTGATAACTATATAACTATTAC
TTATCGTCCCAATTGAACAATTGCGCCTTTACaattacagtatgtggccc
ccaaaacgtctatGCAAATTGAAATCTTTCTAGTGAATTCAGAAAATATC
CCTATGTTAAAAATCATTCTTGTGAATTAAGCTTCAACATGTCTAGTTTC
TTTCCccaattgttggtttgccgtcacccgaccgaccctacctcgaaacc
tgccgacccaaaaaattttattgccattttaaagaagatttttccttcaa
aaacttcaaacaataaaaaatcaaaactcgtatcttgtttgtctcaagtg
GAAGAATcataaattccctgctagcacttctgttttttattcaaaattac
ctaaatgtaaacaaactgttaaccgtcgccaaaataaaaaaaattccgac
cgatcgacccacctccaaaactTAGGGTCGGGTGaaggcaaaccaacaat
tttttaagcccagcccGACATCAAATCATAGCACCGACATCAAATTACTA
TCAATTGGTATGAAGGCAATGCTTTACgacttaaaaaagtcaaaatttac
ttttctgTTTATCTTCATTACAAATGGTTGTTAAAAACGGAGGTTAGTGG
CCTCCAAAACGtcgattcaattaaattgaaatagaccttatcggattttt
ttatattaaaaaaaaacgatgcattgtgggattgtttcgagtgtattaca
atagaaatcacTTAGGAATTCCtggagggaattctattgtaatacactcg
aaacaatcccacgatgcatcgcttttttagaaaaatcaaaaactctgata
aggtctattgttAGAAATCCATCACTTAAACATGTCTCGAATTAATGACA
Cgataaaataattacaaaaaaaataattagttttttatcattttgaaaaa
aaatcataccaaAACAATAAGTTTTTCAGGCTTGACTGAGTGTAAAATCC
CGCGCAAAATATAATCGtgaaatatttcgaattttctgaaaaactttgaa
ttacTGAGTTGGTATGTCGGTATATGTTTATACTTTCCAGAGTTTTTCAG
GGGTTAATTTTCAATCTTGTTTGACTTTTGACGGTTTGGTCCaaaaaagg
gattttcgaaaataatttttgaaaaaaaagaagaaaaaaattagccatgt
taaaaatgacatttttgtattttatttttttttcggactTAAGAGAAATG
TGTTAGGATCAAATCTGAAGCCAAGTTTAAAGTACAAACATGGCTTATTA
AGgcaaaacctccgttttgggggttGTCTCCGTTTTGgtggccatatact
gtataacATTTCTTCAATTGGGAACGCTCAACCGTTATTGAAAAATAGTT
AATTTAAAGCTTCAAAGGATCATCTTTGCCAAATTTCTTGATGTTACCAC
gatcttatgtttttatatgatAAAAGACCTCACTAAATGTGCTCTTATCT
AgcttaatttttttgtgcatcatttgaatttaaaatcagCCGAGTTGAGT
ACAGTTCAAATTCAAgataatacatgttttttttttataagcataacgtt
caTAAGCATACCAATAcctgaatttgtctaaaaaataagcatattacaag
caTATTACTGAGCTTGCTTTTGAGGTGTGTAAGTGAAAATGTTTAATACA
GTACACAGCCTGGCattaaattaacaaaaagtttcttcaaacggcatttt
aattttaaaaaattacaagcGTAAACGCGGCAATCGCTCACAACTTTCCT
GAAAAATCTTATAAATATCCTCATGTATAGCAAcgacagattttgaaaaa
attggagaATCGAATTTTCGGTaaaataagcatatgataaACATACTTCG
AGCCTGAGCCTAAAATATCTGTAAGCATAACTAAGCTTGTTTCCCaaaaa
acatatgcttataaaaaaaaacatgtagacctTCTATGGacctttaattt
tttaaacaacaACTCGAAATTTTGTCACCTGGCTTTGTcacatgacgtca
tcaggtggctgagTAAAAATTATAAATGGTTCGAAAGTATTCAAAACACA
ATAGCCCAAGCGGAGAGATCATGAtctgatgaaaattgaggtataaaacg
tATGATAAGAAATTTGTAGTACTAGGCGAAAccaaattaatttattgttc
tacgacacccccttctcacagacccactggaaatattggccaaaatatcg
tccccagtggaaagataccctcaaatttttgtccccgctggaaatgatca
gataagcaaatctgcactgcaaaatattgtgctattttcccatccccact
gaattttctggctagaaaacaatgaaattaaaatcCCCGGCCATAAAAAA
CATAGGAATATAAATCACcttcgagttttggtccgttatttttaataCCC
CCGCTGGCTGAtgaaatcccaccgggtctgtgagaagggggtgttctaCA
GGACCGATCTATCCAGACCTACCctgttttttccaaaattcgaaaaataa
taatattgaattagCAAAGCTGGAGGATgaactttataatttttttgtgg
atctttttaattgaacaagttgaaaaagtgTAAATTGATCCCAGAACTTA
GATGAATTTAAATGATCACAATGGAAATGGCACAAAAGTCGCTCATCGAT
AAATAGGAAAAAATCTACTGCTTCAAAACCTAACAAATTTCACAGATCTT
GACCTtccgaccctagattttaagaaaacacTTTAAAGAAATCACTTTTA
GGATCAATTTATTTTTACTGctgggtgcaccaaaaaaaagtatacaactt
tgtcgagatgtTGTGAGATTCAGaattcGtatatttttttttttcattct
ttttttatggcatagaggatgctctaacttgaattttgagctatcataca
tacAGGttcgaaaaagtaaaaaaactgacttttttttactgtcgaaattt
caaaaaatcattaaaaacagcgagcaaacttttctatTGACACTTACGTT
cgttacacataaaaataccaaaaaaacacaactgtgttcatcaaaactcg
ttacggaatttaagaatatggtaaaacaagcccCATGTGGAATaatactt
tttgaaaagctgaaaaaatttttttgcaaatctccaagagaggttttgat
gttatgtgtgtgctatgtgagaaaatttttgaaaaaatagatcaccgTTC
CTCGACTAGTTACTCAAaaaacttgggtctgcattgagtttgctggtgtg
ggaaatgttcatgacgtgcaaataagatggacaaactgttggcaaaatat
aagataagagaaaaaagaatttaaaaaaaaatgaaattgtgtttttgtca
ttttgtcttatttatagcatCATAGCttttttttGATGCACCCGGTATac
caactgaccgaccaaccgaccgaccaaccaaccgaccaacttatattttt
ttttatcattgctGATCGATAAATTTCCTATaagcagattcatgtaaaaa
agttacaaaaaggGTCGAGAAAAGCTCTGATCGAAGGAAAGTGGAGATTA
CCTCATGCGCACAAATAGGAAAAACATGTTTAGGTGTGaaattttcagcc
aatcagagctttactcgacgtttgttcgtgacttttttacatgaatctgc
taataggaaattcgTGTATTCTCGGTAACATATACTTTTCCTTTTCACAG
GTCCACAAATCAGAAGGGACTTGGAGGATGAGATCAAAACAACCAAAAGA
CAAAACAGAGATTTGTTGCAACAATCACAAAACAAAGATAAACGTATCCA
GTTATTAGAGGGTCAACTTCGAAGTAAAGAACAAAAATATCATGCAGATT
TAAAGAATATTCAAAGGCGTATCGCGGAGCTTGAACATGAGCTCGAAAAT
AAAGCGAACACGATTGTATATTTGACTTCTACTATACAACAAAAGAAATC
GAAGAAAGCTACATTCGAGGGTCATGTGTCAAACCACGTGCTTGatgaac
aacaacaacaacaactactaTCGAATGTTTCTTCAAATGCCGCCAAATCA
CGATTCAGCCCCACTCCCCCACCACCCATAGTGATGGGCCAAACAAAACG
ACGTGATTATAACCTACGACGGAGTGGTGTCTCTCCTTCACCAAGCCGTG
CAGGAATAATTCAAGATGGTAGCTCACATCCAATGTTAGGTTCAGATTAT
GTTTTACAGAATACGTTACCCAAAACGAATTCTACGCGTATTTCACAACG
TTATAGTAAACAATCGAATTTAGAACATTCAAAATCTAACACTAAAAGAG
ATAAAGAATTTAAATTGGCAAATCATACGAGACCCAAACCTCCGGATTAT
GaagatttcatcaaaatgagtCAACCGGAAGTTATACGTAAATCATCTGC
GGAGCCTTTACCTCCAATTACCACTCGAAGTGGTCGTCAATTGCGTGAAC
CAGTTCAAACGCGTAGCCGCGTGCATCGCCACGTGCGCCCAACTGCGAGC
GCTTTGGGAGAGGTAGAGACTGTCATAATGGATTCTAGTCTATCTTCACC
GGAACGAACAATAAGAACATCCTtacaaaattcaacaaagtaa Coding sequence (CDS) from alignment at sc0000084_pilon:644039..650431+ >XLOC_037210 ID=XLOC_037210|Name=XLOC_037210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2190bp|location=Sequence derived from alignment at sc0000084_pilon:644039..650431+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTGTGAGGTGTATCCTGACCAAACACAACAACAAAAGATCCAAAG
CCTTCAACATTCCATTGCATTCTTACAATCACAACACGCAACAACTTTGA
GCTCCTTGCATCAAGAGATCGAAAGGCTACAGAAGAAATGCAAAGATGGC
TTGTGAGGTGTATCCTGACCAAACACAACAACAAAAGATCCAAAGCCTTC
AACATTCCATTGCATTCTTACAATCACAACACGCAACAACTTTGAGCTCC
TTGCATCAAGAGATCGAAAGGCTACAGAAGAAATGCAAAGATCTAACAAA
TCAAGTAACACTATCAGTACCCTCGTCTGAAGTTGTACCTTGTTCAGATC
TAACAAATCAAGTAACACTATCAGTACCCTCGTCTGAAGTTGTACCTTGT
TCAGGTCCACAAATCAGAAGGGACTTGGAGGATGAGATCAAAACAACCAA
AAGACAAAACAGAGATTTGTTGCAACAATCACAAAACAAAGATAAACGTA
TCCAGTTATTAGAGGGTCAACTTCGAAGTAAAGAACAAAAATATCATGCA
GATTTAAAGAATATTCAAAGGCGTATCGCGGAGCTTGAACATGAGCTCGA
AAATAAAGCGAACACGATTGTATATTTGACTTCTACTATACAACAAAAGA
AATCGAAGAAAGCTACATTCGAGGGTCATGTGTCAAACCACGTGCTTGat
gaacaacaacaacaacaactactaTCGAATGTTTCTTCAAATGCCGCCAA
ATCACGATTCAGCCCCACTCCCCCACCACCCATAGTGATGGGCCAAACAA
AACGACGTGATTATAACCTACGACGGAGTGGTGTCTCTCCTTCACCAAGC
CGTGCAGGAATAATTCAAGATGGTAGCTCACATCCAATGTTAGGTTCAGA
TTATGTTTTACAGAATACGTTACCCAAAACGAATTCTACGCGTATTTCAC
AACGTTATAGTAAACAATCGAATTTAGAACATTCAAAATCTAACACTAAA
AGAGATAAAGAATTTAAATTGGCAAATCATACGAGACCCAAACCTCCGGA
TTATGaagatttcatcaaaatgagtCAACCGGAAGTTATACGTAAATCAT
CTGCGGAGCCTTTACCTCCAATTACCACTCGAAGTGGTCGTCAATTGCGT
GAACCAGTTCAAACGCGTAGCCGCGTGCATCGCCACGTGCGCCCAACTGC
GAGCGCTTTGGGAGAGGTAGAGACTGTCATAATGGATTCTAGTCTATCTT
CACCGGAACGAACAATAAGAACATCCTtacaaaattcaacaaagtaaGTC
CACAAATCAGAAGGGACTTGGAGGATGAGATCAAAACAACCAAAAGACAA
AACAGAGATTTGTTGCAACAATCACAAAACAAAGATAAACGTATCCAGTT
ATTAGAGGGTCAACTTCGAAGTAAAGAACAAAAATATCATGCAGATTTAA
AGAATATTCAAAGGCGTATCGCGGAGCTTGAACATGAGCTCGAAAATAAA
GCGAACACGATTGTATATTTGACTTCTACTATACAACAAAAGAAATCGAA
GAAAGCTACATTCGAGGGTCATGTGTCAAACCACGTGCTTGatgaacaac
aacaacaacaactactaTCGAATGTTTCTTCAAATGCCGCCAAATCACGA
TTCAGCCCCACTCCCCCACCACCCATAGTGATGGGCCAAACAAAACGACG
TGATTATAACCTACGACGGAGTGGTGTCTCTCCTTCACCAAGCCGTGCAG
GAATAATTCAAGATGGTAGCTCACATCCAATGTTAGGTTCAGATTATGTT
TTACAGAATACGTTACCCAAAACGAATTCTACGCGTATTTCACAACGTTA
TAGTAAACAATCGAATTTAGAACATTCAAAATCTAACACTAAAAGAGATA
AAGAATTTAAATTGGCAAATCATACGAGACCCAAACCTCCGGATTATGaa
gatttcatcaaaatgagtCAACCGGAAGTTATACGTAAATCATCTGCGGA
GCCTTTACCTCCAATTACCACTCGAAGTGGTCGTCAATTGCGTGAACCAG
TTCAAACGCGTAGCCGCGTGCATCGCCACGTGCGCCCAACTGCGAGCGCT
TTGGGAGAGGTAGAGACTGTCATAATGGATTCTAGTCTATCTTCACCGGA
ACGAACAATAAGAACATCCTtacaaaattcaacaaagtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:644039..650431 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 205-1095:5503 |
| Aaloc | 148-201:1049 |
| Aaloc | 1-144:1 |
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