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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:988056..992467+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037205 ID=XLOC_037205|Name=XLOC_037205|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4412bp|location=Sequence derived from alignment at sc0000084_pilon:988056..992467+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGATATATACTTGGGTAAGTTGTTTAAGTGTTCTTTGCTAGTTTTGC
TTTAGGGTAGAAAATCGAGTTTAATTACTATTCGGCTTtgcactgggcga
aataataagagatttccaatcctggaagtttaggaaatatcatatttcat
aatatttccaaatctgaaattcattgaaatatcatgaaatatgatatttc
ctaaACAGTTTTTAAGGGAAAGCCTTTGAAGGGTTATAACACTTATAGGA
CTATGTATATATTTCCCAGTTTGAACTACAAGTGATTTTGGTTGTTCAGA
AATGCTGACTCGGTCGGTCTGGCCATACCCATGGTGTAGTGCTGATGAGT
CCCAATAAGGATGAAATTTATTCGCCTGCTCTGCCACTCAATCTtctgag
tgaatataattggcTTCAGCCTCCCCGCTTTTTTGCTAAATAGACTTTTG
TTCTCCGAAGCCTGGCGAATTCTATCTCACTTTTAGCCTTTAGCCTTTAG
CCCCTCCACTTTtgcggttgttccgccgggcttGTGGACAGAAaatctta
tttcttcacatctATTTTCTTAACAATAGAAAAACCACTATAATCTCTAA
ATCCAATTTTCCActtttagtttgtttttgacGATAATGGTCATTAACAA
TGTTGACAGTCAAGAATTAAAACTGCGGAAACCTTATTCCCAAAAGAATT
GTCCTGCAACAATGACAAACCAAATGAAAGCTGCAAACATACTAATCGCA
CGTAAAATCATCAGAAAACTCGAAAATATTACCTCTGTCTTAGACTGCTC
ACAGCCGTGTGCGTCAGATAGTCTGTGTGCGTACTTTTCCTACCATTCAG
TGAACCGTCGTTGTCTACATTTTAAGGGTCTGTTGGCAGAACATACTATA
GCTCAATTAATGTCAGACGGTTGGAGATATGGACGTAGTGTCAATGGAaa
ggtattttctgataaatttcGTCTCAAAATTCTACACTCTCCTTAGAACA
AGTgcattttttctttccaaattccaAGAAAAACTTTTACCTTAAAGTGG
AAGCTTAGTAGGGTGAAATTTAAGTTTGGGAAAACTTTGTCACTTTTGCC
taaaaattttgccattttttcctGACTAAATTTCCCCCTTTAATAAGGTA
AAATTACTTGATTTTCCTcgtgattttcttcttttggaAATAAATTGTGA
ATCAATGTTGGTATTTCTACTGTTTTTCTCATtaaacccccttctcacag
acccactgggaccccttccctctcgaaaaattagccaaaatatcgtcccg
gtggaaaattatccttcaatttttgtccccactgaaaataatcaaataaa
cctaTCCTCACTGCAAACTATTtattattttcacattttcactGACTTGA
AAGCAAAAGAATTGAAgttcccagccataaaaaatatgggactACCAgtc
tccatcgagtttcagtccgttatttttatccccactggctgataaaaccA
CACTGGGTCTATgagaatttcgtgatttttgaaCCCTTATACAGAgactt
aattttctttttaatggtttttgcacccctttgagagactttcgagggtg
tgaaaaaggcacctttatggctcgcacatacctgacACCCATTTTGTCGA
AGTACCCACCTCCCCCGGGTTGAATGTACATGATTAATCTTAGACAGGTT
AAGCCACTGTGCTCTGTTTTCACCTAGTTCGTCATGGTGTGGCGAAAAAT
CGAttgtgtttttctttatttagattgtGTTTTACACAAAACTGAGCACA
TGTGATACAGAATACTGTCAAAAATCATGTTTGTTTGATATCAAGGAATT
TGTTGATGGTAAGCTTGTATCTACTACTATTTTCTTTTGTCCTCTGTAAT
GTAAGACGAgcttcatctaagaggaacaaacgtgaagacgggaatttttt
acggGGGTGGCTGTTgtcacagactctatccgccgcgaaacatattacgt
tttatatatacaaactatgttatatcataataatatattatacggacgat
agcatcgtctaactCTAAACGAGAGTCAAAATTCCGAAATTACGACCTAA
GTGTTGCTGAAGTGCGTACTATAcccgttttttataaaaatgaagttttc
attTCACCATAAATATTCTtagattttatgaaaaattccatGATAACGAT
ATTTttagcatgttcttaattttttagccaatttcATCGGATATTTTTAT
ATAGTATATTCTGTGTTTAAATTAAGTCAATAAGTGAATAAAATCAGTAA
AATTAAAAGGTTaaagcttgttcttataaaaactacGTGTATTGAACAAA
GGattgaaacaaaaataccattagatgtcAGAATGAATAAAACCTTGCAC
ATGTTAAACATCAAACTTTGTGATAACAGTTATCTATCACCAAGAAGATG
CAGAAACATTTATctgacacgctaaagctctgaaggacgGGAAGGTTTAG
GTTATAAGCTCTTCAATGTTGAAATACTTGTCCTcgcaaatgtcttcatt
ttctttttcatcaatttttttcaatgcagttttggaattttcagattcag
gaatagtctgtctaacagaaaatgtataacatgtcgtagttttgttggtt
acatcagtcagaaaacacattttaaacacggcatttatgaaaaattcact
atggtccttatagaatttcaaaatgacCGCGTCTAAAATTTTTGCGGTGG
ATTCAACATTTCTGCTTTACgcgcaagggtagttgaacccgactggggaa
gcgacacatcaaaggccgactattctaatcctctccgatgggaagtTGGC
CTGCTCTTTTAAAGCTTTAGcatgggcggccgccaatccgccatcgaaTA
TATACCAGATAATtataacttcttttttttttcgtctcaGGTTTTATTCC
GTATGGAGCGGGAAATGGTGACCAATTTGTTCGAGAAGGAGATGACGTCA
CCGATTGTACTCCAGTTTCAGGGGATTTCCCCTTATTCACTACGAAAGGA
CATTATAGATTATGCGTGAGTCAATTtctacaatttatagatctaataca
gtgtgtcccgaaaaaaggaTAAAGAATTTacaacaataaataaaaatcca
tggataagatatattttttttggttttcccCTTGTTCACTACGAAAGGAC
ATTATAGATTATGTGTGAGCCATTTgctacaatttatagatctaatacag
tgtgtcccgaaaAAGGGTAAGGAATTTACATCAATAAAAATCCATGAAta
agatatatttttttggttttaccCTTGTTCACTACGAAAGGGCATTATAG
ATTATGTGTGAGCCATTTGCTACAATTTATAAGTCTACAGTGTGCGCCGA
GAAAAGAGTAaggaattttcaacaaaaaaaatccaTGGATAAGATATATG
ATAAGATACATTAGAATTTTACTATCAAACTTGCAATTCAGTAGTCACCA
AACATACCCTTACAatgtatccagctaaaagaatacccttgtagtgcact
ccATCAAAAGTAcaaccttacagtgcatttcgagggtctcgaaaaaccta
ccatTAAGGGCGGTAAATGCCGTaagtcggaccatatgagtgcacCCCCA
CTCGGATTTtaccaagtttatgtatttgcacttttcaggacggtagagtg
actgaagcgattttgaAAAACCcacaattccgccccgcaaaatcgaggac
cgtaaaagtgctaatttaccgtcgtcctcagctggttaggatctactcaa
attagaaccttaccatctccgtcgctgaaaaacacacatacataaacttg
cttttATCTTAATAGATTCAACTGTATTTTAagatcgtttttttttaatt
tttcttaccAGATTTCTTCAAACGGATATTTCACGGTAGATACTCAAAGT
TTTTCTTATACGCCATCATTAGAAAACAATGCACATATAATGATGATTCC
GTTCAACGCAGATACAAGAAGTAATGGCTCCGACATATCCTTCAGGATGA
CTTCAGATCCAAACGATATGATACTCATTGATGAAGCGATAATGTTGTCT
CTTAATCGACCAGGTTATCCAGCAGACTATAAAACCAAACAAGCTTTATT
GGTCACAAATAATAATATCCCTCATTATAAATATAGTCGATCTAATGAGA
GATACCATTTTCAGACTGTGTTAGCGACTGATTTTACGCACACTTTTATA
TACATGAGTTTCGATCGTGTTGATGTTGGCGGACCGGATAATATCGGATT
TAATCAACCAGGAATATGTACACGAAAGTTTGGATTGAAATCTGATGGGT
CGTTGGTTACGAACAGTAATATTGGGATTCCTGggaaatatgttttcttg
GCGGTATGTTAA Coding sequence (CDS) from alignment at sc0000084_pilon:988056..992467+ >XLOC_037205 ID=XLOC_037205|Name=XLOC_037205|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2118bp|location=Sequence derived from alignment at sc0000084_pilon:988056..992467+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGATATATACTTGGATGGGATATATACTTGGtttgtttttgacGATA
ATGGTCATTAACAATGTTGACAGTCAAGAATTAAAACTGCGGAAACCTTA
TTCCCAAAAGAATTGTCCTGCAACAATGACAAACCAAATGAAAGCTGCAA
ACATACTAATCGCACGTAAAATCATCAGAAAACTCGAAAATATTACCTCT
GTCTTAGACTGCTCACAGCCGTGTGCGTCAGATAGTCTGTGTGCGTACTT
TTCCTACCATTCAGTGAACCGTCGTTGTCTACATTTTAAGGGTCTGTTGG
CAGAACATACTATAGCTCAATTAATGTCAGACGGTTGGAGATATGGACGT
AGTGTCAATGGAaagtttgtttttgacGATAATGGTCATTAACAATGTTG
ACAGTCAAGAATTAAAACTGCGGAAACCTTATTCCCAAAAGAATTGTCCT
GCAACAATGACAAACCAAATGAAAGCTGCAAACATACTAATCGCACGTAA
AATCATCAGAAAACTCGAAAATATTACCTCTGTCTTAGACTGCTCACAGC
CGTGTGCGTCAGATAGTCTGTGTGCGTACTTTTCCTACCATTCAGTGAAC
CGTCGTTGTCTACATTTTAAGGGTCTGTTGGCAGAACATACTATAGCTCA
ATTAATGTCAGACGGTTGGAGATATGGACGTAGTGTCAATGGAaagattg
tGTTTTACACAAAACTGAGCACATGTGATACAGAATACTGTCAAAAATCA
TGTTTGTTTGATATCAAGGAATTTGTTGATGattgtGTTTTACACAAAAC
TGAGCACATGTGATACAGAATACTGTCAAAAATCATGTTTGTTTGATATC
AAGGAATTTGTTGATGGTTTTATTCCGTATGGAGCGGGAAATGGTGACCA
ATTTGTTCGAGAAGGAGATGACGTCACCGATTGTACTCCAGTTTCAGGGG
ATTTCCCCTTATTCACTACGAAAGGACATTATAGATTATGCGTTTTATTC
CGTATGGAGCGGGAAATGGTGACCAATTTGTTCGAGAAGGAGATGACGTC
ACCGATTGTACTCCAGTTTCAGGGGATTTCCCCTTATTCACTACGAAAGG
ACATTATAGATTATGCATTTCTTCAAACGGATATTTCACGGTAGATACTC
AAAGTTTTTCTTATACGCCATCATTAGAAAACAATGCACATATAATGATG
ATTCCGTTCAACGCAGATACAAGAAGTAATGGCTCCGACATATCCTTCAG
GATGACTTCAGATCCAAACGATATGATACTCATTGATGAAGCGATAATGT
TGTCTCTTAATCGACCAGGTTATCCAGCAGACTATAAAACCAAACAAGCT
TTATTGGTCACAAATAATAATATCCCTCATTATAAATATAGTCGATCTAA
TGAGAGATACCATTTTCAGACTGTGTTAGCGACTGATTTTACGCACACTT
TTATATACATGAGTTTCGATCGTGTTGATGTTGGCGGACCGGATAATATC
GGATTTAATCAACCAGGAATATGTACACGAAAGTTTGGATTGAAATCTGA
TGGGTCGTTGGTTACGAACAGTAATATTGGGATTCCTGggaaatatgttt
tcttgGCGGTATGTTAAATTTCTTCAAACGGATATTTCACGGTAGATACT
CAAAGTTTTTCTTATACGCCATCATTAGAAAACAATGCACATATAATGAT
GATTCCGTTCAACGCAGATACAAGAAGTAATGGCTCCGACATATCCTTCA
GGATGACTTCAGATCCAAACGATATGATACTCATTGATGAAGCGATAATG
TTGTCTCTTAATCGACCAGGTTATCCAGCAGACTATAAAACCAAACAAGC
TTTATTGGTCACAAATAATAATATCCCTCATTATAAATATAGTCGATCTA
ATGAGAGATACCATTTTCAGACTGTGTTAGCGACTGATTTTACGCACACT
TTTATATACATGAGTTTCGATCGTGTTGATGTTGGCGGACCGGATAATAT
CGGATTTAATCAACCAGGAATATGTACACGAAAGTTTGGATTGAAATCTG
ATGGGTCGTTGGTTACGAACAGTAATATTGGGATTCCTGggaaatatgtt
ttcttgGCGGTATGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:988056..992467 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 559-1059:3912 |
| Aaloc | 436-558:2943 |
| Aaloc | 349-432:1774 |
| Aaloc | 19-348:622 |
| Aaloc | 1-15:1 |
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