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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:1037781..1040702+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037202 ID=XLOC_037202|Name=XLOC_037202|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2922bp|location=Sequence derived from alignment at sc0000084_pilon:1037781..1040702+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGTGCAAATTACTGAAGATCTGATACGAAAACGATCTGAGCATAACGG
TTGTGAAATCACAACACTGGAAGAAATTTCACTTCATCAATGTGACATTG
AGCGTTTAGAATACATTGGGAAGTGGTGCCGAGACTTGAAAATCTTATAC
CTACAATCTAACTTGATTCCCAAAATTGAGAACATTCACCAACTAAAGAA
ATTAGAGTATTTGAATTTGGCTTTGAATAATATCTTGGTTATTGAGAATC
TGGAAGGGTGTGAGTCGCTGAAAAAACTTGATCTAACTGTTAACTTCGTT
GGTAAAATCACCTCTATCGAGTCACTCAAAGGAAATGAATTTTTACGGGA
CATGTATTTAACGGGTAACCCTTGTACGGAATATGTGGGTTATCGAGACT
ATGTAATTGCGACATTGCCTCAGTTAACCAGTTTAGATGGTACACCGATA
TCCAAGTCTGAACGCATAAAGGCGAACCAGAAATTGACTGAACTGAGGTG
CGATATGTTGAGACAAGAAAAGATATATTTGGCTAAACAAGACAAAGAGC
AAGAAATTGAGGAAATCGAGACAAACGGCGTCAAAAAAGAGGTTTGTAGT
TTTACGGATAACAGTATACGCGCGTTCCGTGTAAAGATGTCATGGGAGAA
TTGAAGACAGTCATACGATGATCGAATCGTGAGGTGTGGAGGGAGGCCAT
TGTATTTTTCGATCTTGGTCGATCTTAGATTTTCTTGATGTCAGATATGG
GGGAGGCATTATATTTCTTAAGAGATATGAACTCTATTTGTTGGCTGATG
GTAGCGCTTTATCTCAGTCTGACCGGGAGGAGACCCCCCAGTAGTTTTCG
TGATGGCATGATTGGCGATTTTTCAAGTTCGTTATTTTGGGATTCAAGAT
TTTAAAGTGTGTGAATGCCTGATCGGAGGAACCAacgtgatcaacgtgat
cgtAATAGAAAGGAaattaataacaataataataataatggtatatttca
atctccaaaatttacatttggctcttcagctgaaaatattatataacaTA
TGTGTgcaaagtctagaaaaaaatatttatatttataaaattaatattta
taaaattaatatgtataCTAGTGAGATGCTCTGACCGGCTACGCTAGCAA
AGTAGAGTGTTAGTAATTGTAATTGTaaatttaactcgtgataatgtgat
ttggaaatttttttcttgatcgATCTTAGAAAATGACTGAAGAGGAATTC
TGGTCAAAACCTTCGAAATTTACTCCTCAAAGTCGCGTTGAAGCTCACCA
TTTCATGgaagaaaaacggaaagaaaaagaggaaactaagaaaaCCGATT
TTCCCGATTTAAGAAATTCGTTACAAAGAACAATCCGATTTTTCACTGAT
GATGGAAGACCGTTGAATATTAACCAggataaaatcgattttgaatttca
agagAATGATGACTTCACGGGCTACGTTTTGGATGTGGCGTGTTACAAAC
ATTTAGGTGAGAAAAACCATTTCTAACTTCTAACTGCtgactttaatcgg
attaattttcgcgaaatttaatcttgcGttttttttACGAATGCAtttca
ttttcgcgaaaataaactTTCGAAATCGATTGAGACTCGATGAATCGCGA
AATTAATAGcatgcaaaatttttgagatCAGATCTTCAGCGTAAGATAAA
CTGTAAATAAGCtattttttggtgtttaaaGGGCGGTCATTTTCAGCAAA
TTGTTGGCTGGTTTGCGaagtttaattaattttttttgaaattttgtggc
AGTGAATATACCTTCCCCAACTCATGTCATGCGAGGGGAATTGGATAGAC
AGAAAAAGTATGTGTGGAcgataagggtcggttttttcacctttcacttt
tccaaagtctctctaagggttacgaaaatcagaaaattaaaagttGCCCC
TGTAAGGGTCAAAAAAGTCTCGCaagctacaatcatggacaaagtATTTG
AAttaaaggggatttccctgcgaaatttttaacatcacaaatgattttta
agtgcgttaaagtacggttggaaagtagagttttaactctgagttttaac
atgagacttaagccTTAGGAcattaggatctcaggatttaaaagctcaaa
tttgctccaataaggcgtGGAGTATAGCCCAGAAGCCAACGAACCCCTCC
AAAAACGaattattcaatgaaagaaagtgaaagtgctaaaatagcaattc
tcgcccgaactttaaattctgaaaaacatgaaaatacactaaaaaaatct
caatatattttcatGATTGTAGTATGCAGTACAAATGATCGTttaggttt
gttatattttttatatctttgcAGATACCTCACTGATCGATGTTGATTTG
CAACCACACTACGTTTGTGTTACAATGAAAGGGAAAATACTTCAACTCTC
TCTCAACGAAGAAATCAGTCCAGATAAAAGTACAGCACAGCGATCGCAAA
CCAGTGGACACTTACTTATCAACATGCCTAAGCTAAAATATATACTTGAA
GGTCGTTGCTCTGGTTCTAGACGGCCGAAAACCGATTCTAAAGTCGCGAA
AATGGGCAGTAACGAGTTTCGGGATGCGACAACTAAAACTCGGGAGACGA
AAACTAACGGTTGTGACTCTGGTGAAACGAATACTGACGACTTGCAAAAG
TCGGTTGAACGACTTGAAGTGACAGAGAACGAGAATAAAATTGATTATAC
AAACATTGTAAAAGAGGAAAACGAAAAATCTAAAGATTTGAATTCGTTTA
TTTTCAATGGAAAGAAGAGGAAAGGGGGTTCATTAATGACcaataataat
gaaaatgtaATGAGCGAAGATCAGTATGTAGAAGATTTTGTTGATGATTT
AGATGTACCGCCTTTGGAGTGA Coding sequence (CDS) from alignment at sc0000084_pilon:1037781..1040702+ >XLOC_037202 ID=XLOC_037202|Name=XLOC_037202|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2832bp|location=Sequence derived from alignment at sc0000084_pilon:1037781..1040702+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGTGCAAATTACTGAAGATCTGATACGAAAACGATCTGAGCATAACGG
TTGTGAAATCACAACACTGGAAGAAATTTCACTTCATCAATGTGACATTG
AGCGTTTAGAATACATTGGGAAGTGGTGCCGAGACTTGAAAATCTTATAC
CTACAATCTAACTTGATTCCCAAAATTGAGAACATTCACCAACTAAAGAA
ATTAGAGTATTTGAATTTGGCTTTGAATAATATCTTGGTTATTGAGAATC
TGGAAGGGTGTGAGTCGCTGAAAAAACTTGATCTAACTGTTAACTTCGTT
GGTAAAATCACCTCTATCGAGTCACTCAAAGGAAATGAATTTTTACGGGA
CATGTATTTAACGGGTAACCCTTGTACGGAATATGTGGGTTATCGAGACT
ATGTAATTGCGACATTGCCTCAGTTAACCAGTTTAGATGGTACACCGATA
TCCAAGTCTGAACGCATAAAGGCGAACCAGAAATTGACTGAACTGAGGTG
CGATATGTTGAGACAAGAAAAGATATATTTGGCTAAACAAGACAAAGAGC
AAGAAATTGAGGAAATCGAGACAAACGGCGTCAAAAAAGAGatGGTGCAA
ATTACTGAAGATCTGATACGAAAACGATCTGAGCATAACGGTTGTGAAAT
CACAACACTGGAAGAAATTTCACTTCATCAATGTGACATTGAGCGTTTAG
AATACATTGGGAAGTGGTGCCGAGACTTGAAAATCTTATACCTACAATCT
AACTTGATTCCCAAAATTGAGAACATTCACCAACTAAAGAAATTAGAGTA
TTTGAATTTGGCTTTGAATAATATCTTGGTTATTGAGAATCTGGAAGGGT
GTGAGTCGCTGAAAAAACTTGATCTAACTGTTAACTTCGTTGGTAAAATC
ACCTCTATCGAGTCACTCAAAGGAAATGAATTTTTACGGGACATGTATTT
AACGGGTAACCCTTGTACGGAATATGTGGGTTATCGAGACTATGTAATTG
CGACATTGCCTCAGTTAACCAGTTTAGATGGTACACCGATATCCAAGTCT
GAACGCATAAAGGCGAACCAGAAATTGACTGAACTGAGGTGCGATATGTT
GAGACAAGAAAAGATATATTTGGCTAAACAAGACAAAGAGCAAGAAATTG
AGGAAATCGAGACAAACGGCGTCAAAAAAGAGAAAATGACTGAAGAGGAA
TTCTGGTCAAAACCTTCGAAATTTACTCCTCAAAGTCGCGTTGAAGCTCA
CCATTTCATGgaagaaaaacggaaagaaaaagaggaaactaagaaaaCCG
ATTTTCCCGATTTAAGAAATTCGTTACAAAGAACAATCCGATTTTTCACT
GATGATGGAAGACCGTTGAATATTAACCAggataaaatcgattttgaatt
tcaagagAATGATGACTTCACGGGCTACGTTTTGGATGTGGCGTGTTACA
AACATTTAGAAAATGACTGAAGAGGAATTCTGGTCAAAACCTTCGAAATT
TACTCCTCAAAGTCGCGTTGAAGCTCACCATTTCATGgaagaaaaacgga
aagaaaaagaggaaactaagaaaaCCGATTTTCCCGATTTAAGAAATTCG
TTACAAAGAACAATCCGATTTTTCACTGATGATGGAAGACCGTTGAATAT
TAACCAggataaaatcgattttgaatttcaagagAATGATGACTTCACGG
GCTACGTTTTGGATGTGGCGTGTTACAAACATTTAGATACCTCACTGATC
GATGTTGATTTGCAACCACACTACGTTTGTGTTACAATGAAAGGGAAAAT
ACTTCAACTCTCTCTCAACGAAGAAATCAGTCCAGATAAAAGTACAGCAC
AGCGATCGCAAACCAGTGGACACTTACTTATCAACATGCCTAAGCTAAAA
TATATACTTGAAGGTCGTTGCTCTGGTTCTAGACGGCCGAAAACCGATTC
TAAAGTCGCGAAAATGGGCAGTAACGAGTTTCGGGATGCGACAACTAAAA
CTCGGGAGACGAAAACTAACGGTTGTGACTCTGGTGAAACGAATACTGAC
GACTTGCAAAAGTCGGTTGAACGACTTGAAGTGACAGAGAACGAGAATAA
AATTGATTATACAAACATTGTAAAAGAGGAAAACGAAAAATCTAAAGATT
TGAATTCGTTTATTTTCAATGGAAAGAAGAGGAAAGGGGGTTCATTAATG
ACcaataataatgaaaatgtaATGAGCGAAGATCAGTATGTAGAAGATTT
TGTTGATGATTTAGATGTACCGCCTTTGGAGTGAATACCTCACTGATCGA
TGTTGATTTGCAACCACACTACGTTTGTGTTACAATGAAAGGGAAAATAC
TTCAACTCTCTCTCAACGAAGAAATCAGTCCAGATAAAAGTACAGCACAG
CGATCGCAAACCAGTGGACACTTACTTATCAACATGCCTAAGCTAAAATA
TATACTTGAAGGTCGTTGCTCTGGTTCTAGACGGCCGAAAACCGATTCTA
AAGTCGCGAAAATGGGCAGTAACGAGTTTCGGGATGCGACAACTAAAACT
CGGGAGACGAAAACTAACGGTTGTGACTCTGGTGAAACGAATACTGACGA
CTTGCAAAAGTCGGTTGAACGACTTGAAGTGACAGAGAACGAGAATAAAA
TTGATTATACAAACATTGTAAAAGAGGAAAACGAAAAATCTAAAGATTTG
AATTCGTTTATTTTCAATGGAAAGAAGAGGAAAGGGGGTTCATTAATGAC
caataataatgaaaatgtaATGAGCGAAGATCAGTATGTAGAAGATTTTG
TTGATGATTTAGATGTACCGCCTTTGGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:1037781..1040702 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1330-1410:2842 |
| Aaloc | 1123-1329:2632 |
| Aaloc | 871-1122:2377 |
| Aaloc | 592-867:1230 |
| Aaloc | 1-591:1 |
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