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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:1161472..1164595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037187 ID=XLOC_037187|Name=XLOC_037187|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3124bp|location=Sequence derived from alignment at sc0000084_pilon:1161472..1164595- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATGTTTACATGATAAAGTCAACATCGTTCCCGTCATTGCCAAAGC
TGATACATTAACCAAGAAAGAAGTCAAAGAACTTAAACAGAGGATTCTTA
GAGAAATTTATGAAAATCAAATTCAAATTTATCAATTCCCTGAGGCGGAT
GAAGAAGAAGATGATGAAGAATTTATAGCCGTTAATAAAGAATTAAAAGT
AAGCCATCTCTCTGATTGGTTGATATTTTGAATAACGCCTTTTGATTGGT
CTGAAATGACGACATAATTTATTTCTCAACTTTCCAAAATTATGATAAGT
TCGGGTGATTTTGGGAATAAAAGCTCCTTGTTTTCATTGAAAAAAAATTC
AAATAGCCCCCACTACATTCACGCTATTTTGAAATGTTTTCAATGAACCT
CGGGACTATTATTCCCAAATCACCCTCCAATCCATGTTATCTCTAGTGCT
TATAGCCCAGGGGCACTCGATTCTATCGATGACTTAACCTTTTTGTTAAC
GCTTTTTTCTTTTACAGAATAGCGTACCATTCGCTGTAGTTGGTAGCAAT
ACAGTTTACGAAGTGAATGGTAAAAAAGTCCGTGGAAGAATCTATCCATG
GGGCGTTGTTGATAGTAAGTCTTCTAGTTGTGTATCATCTTTTTTGATGA
GATTTAGCATGGAACATTAAGCCTTTGAATTCTTTTTTTCAAGCACGACT
CGATTTTTGAGCAAGATTTATACTGAATCTGACCATGTTTTTCAATTGTC
AAATCCCAAGAAATTTTGGTTTGACAATGAATGAATCCAGCTTGCACACA
ACATTGCTTACGCGCTCATCTACTATTATTATGTATGTTATGGACAATAG
ATAGACGTTGAAATGACACCAAAAGCGCAAAAGTCGCAAAGGTTCGGATA
GCGCTGCGGTACAACTACTTTTTAAAAAAAGACAAAACGAAACAGATACT
TTTTTCACGAAAGACTTCTCGCAGAGCCTCTTTTAGTCGTCCTGCTTGGC
TCGTCACTCGAGTTTTAGCGGAAATATTTTCGTTTGATTGTTAAGGGATC
TTTTGGATTGTTATAGGTAAGTGCAGTACTCCTTCTTAAAAGAAAAGGCA
CCGCTTGGATTAAAAGAACTTCTTTCTTCATTTTAGTCGAAAATCCAGCA
CATTGTGACTTCACCATGTTGAGGAATATGTTAATCAGGTAAATGAAGAA
CTTAATGAACAGACCTACCAATACGCTAAATAGCGCCAAAACGCTGGTGT
ATGTCCTATCGATTAGCAGGGACTAGTGCGAGCAAAATTTTTTTATACTG
AAAATCAAATTTTTCGCACTATTAAGTAGTGGAGTCTCCATAACTCGAAC
ACGCACGGAGAAAACAAATTTGTCCGATATAATGAAGTTTCGAATTATGG
AGATTGGTTTTTAAGGCATTGTTAACTGAAATGACCAGAAAACTTGTTCG
AGTTAAGGAGACATTCGGGTTATGGAGGTTCGAGTTGTAGAGACTCCACT
GTACTTTGTTCACGATATCCTCTAAATATCTAATATCTATCGGAAATATA
CGAACGAAATCTTACACCCTGATTGCTTCTAAAAATCGCAAAACTGGGGT
AAAACCTCCGATAAAGAACATCACGTAAGCTTATGCGTCAAGCCTACAAA
AATCAAAGAAGCTTTAACTCGAAATATTTATTAGATTTAAAATTTTGCTA
GGAAATCTTTGTCTCTCCCTCTGTCTGAAATTGTTTGTCCATTGCTTGTA
AAAGTAAAAGTGTTGTAGTTTTCACTTTCTAACTTTTGATCACCCTCATT
TTTTAGGACGCACATGCAAGATTTGAAAGACGTCACACAAGACACACATT
ACGAAAATTACAGAGCGAAGAAATTGGCTTCAGGAGAACCACTCGAAGTA
TCAGAAAAGTATGTCACCCTTATACACTCTTTTTATTTTATAAGAACGAT
TTTATAAGAACAATTAGGCTCAAAATTGCCAAAAAAATAAGAGCAATTTA
AGAACAATGCTGAGCCTGAAATAACTCCATTTGAAGCGATTGAGAGGTCA
AAGAAGTAAAAATTAGTCTAAAATACCTCAAGAACAATTTGAGGCTAAGA
ACAATTTGATGCTCAAAGTGCCGAAAAAATAAGAACTCGAGTCAGAAAAA
ACTGGTTCTTATAAAAAAAGGGTGTACATAACTATGGTTACTACTGTAAC
CACAAATTTGCTTCTTCTTTTTTTTCTTTTTCTTTTTTTTTTTTTTGAGG
GGGGGGGTGTTTTTAATGTATGAATCGGACTAGATTCGATTTATTTACCA
AGGAATCTTTTATTAATTTACTGGCTATCACTGTACTTTGGTAGTACCGT
ACATAAAAGATTAAACCATTATATATTTTTCTTTTTCTCAGTGGTGGTGG
TGGTCGCGCCAGTCAAGAACTCGACAGTCGAGATGCACTTCTCATGGAAA
AAGAGGCTGAAGTAAGTACCATTTTTAAAGCATTTCACACAAGTAAATGT
GATCCATGTAATTCCTATAGACACCCTCTTCTCACAGACCCACTGGGACC
CCTTCCCACAGGAAAAATTGGCCAAAATATCGTCCCCAGTGGAAAATTAT
ATTATAATCTTGTCCCCGCTGAAAATAATCATATAAGCAAATGCTCACTG
CAAAATATTGTGCTATTTCTTTCCATTCCCACTGAATTTTATAGCTCGAA
AACAATGAAGTTCTAATCCCCAGCCTTAAAAAATATGGGAATATCAATCC
CCGTTGCGTTTTGGTCCACTATTTTCAACCCCTCTGGCTAAAAAAATCCT
ATTGAGTCTGTGAGAAGGTGGTGTCTATAGGATAGGCCTCAGTTATATTT
ATTTCGACATACACGCTTTTTTATTTATAAGAACAGTTTTATAACTTGGT
TAGTTCTTATAAGAAACGTCAGTGTGCGTTGAAGTGTGTATTTTCTTGAT
CTTCGTTTTCTTCATTTTCTTCATTTCTTCATTGTTGTAATTTTTACTTT
GTTTTTGATAATGCATTATTTTTATTCAAAAAAAATTATTTTAATTTTTT
AGTTGAGACGTATGCAAGAAATGATCGCCAAAATGCAAGCTTCTATGCTA
CAACAGCAACAAAACGTTTCCTAG Coding sequence (CDS) from alignment at sc0000084_pilon:1161472..1164595- >XLOC_037187 ID=XLOC_037187|Name=XLOC_037187|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1182bp|location=Sequence derived from alignment at sc0000084_pilon:1161472..1164595- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATGTTTACATGATAAAGTCAACATCGTTCCCGTCATTGCCAAAGC
TGATACATTAACCAAGAAAGAAGTCAAAGAACTTAAACAGAGGATTCTTA
GAGAAATTTATGAAAATCAAATTCAAATTTATCAATTCCCTGAGGCGGAT
GAAGAAGAAGATGATGAAGAATTTATAGCCGTTAATAAAGAATTAAAAAT
GAAATGTTTACATGATAAAGTCAACATCGTTCCCGTCATTGCCAAAGCTG
ATACATTAACCAAGAAAGAAGTCAAAGAACTTAAACAGAGGATTCTTAGA
GAAATTTATGAAAATCAAATTCAAATTTATCAATTCCCTGAGGCGGATGA
AGAAGAAGATGATGAAGAATTTATAGCCGTTAATAAAGAATTAAAAAATA
GCGTACCATTCGCTGTAGTTGGTAGCAATACAGTTTACGAAGTGAATGGT
AAAAAAGTCCGTGGAAGAATCTATCCATGGGGCGTTGTTGATAAATAGCG
TACCATTCGCTGTAGTTGGTAGCAATACAGTTTACGAAGTGAATGGTAAA
AAAGTCCGTGGAAGAATCTATCCATGGGGCGTTGTTGATATCGAAAATCC
AGCACATTGTGACTTCACCATGTTGAGGAATATGTTAATCAGTCGAAAAT
CCAGCACATTGTGACTTCACCATGTTGAGGAATATGTTAATCAGGACGCA
CATGCAAGATTTGAAAGACGTCACACAAGACACACATTACGAAAATTACA
GAGCGAAGAAATTGGCTTCAGGAGAACCACTCGAAGTATCAGAAAAGACG
CACATGCAAGATTTGAAAGACGTCACACAAGACACACATTACGAAAATTA
CAGAGCGAAGAAATTGGCTTCAGGAGAACCACTCGAAGTATCAGAAAATG
GTGGTGGTGGTCGCGCCAGTCAAGAACTCGACAGTCGAGATGCACTTCTC
ATGGAAAAAGAGGCTGAATGGTGGTGGTGGTCGCGCCAGTCAAGAACTCG
ACAGTCGAGATGCACTTCTCATGGAAAAAGAGGCTGAATTGAGACGTATG
CAAGAAATGATCGCCAAAATGCAAGCTTCTATGCTACAACAGCAACAAAA
CGTTTCCTAGTTGAGACGTATGCAAGAAATGATCGCCAAAATGCAAGCTT
CTATGCTACAACAGCAACAAAACGTTTCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:1161472..1164595 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 520-591:73 |
| Aaloc | 451-519:733 |
| Aaloc | 349-447:1318 |
| Aaloc | 298-345:1987 |
| Aaloc | 199-294:2608 |
| Aaloc | 1-198:3125 |
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