XLOC_037171 (mRNA) -

Overview
NameXLOC_037171
Unique NameXLOC_037171
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000021_pilon:1607063..1608406-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037171 ID=XLOC_037171|Name=XLOC_037171|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1344bp|location=Sequence derived from alignment at sc0000021_pilon:1607063..1608406- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTAAAAACAAAAGAAGAGCTTAAGAAATGGGAAGCATCGCGAAA GAGAACTTACATTCTATTCTGTTTCTTTCTTGGTTTGATCGGAACAGAAT ACTCAATCGTTGTTCCATCTTTGTTGACTTATTTACGTGACGTCATCAAG GTCGAGTATGAGAAGACATGGTTTGCTTTGATCACCGCTGCTTATTGGAT CTCATCCATGGTGAGCAATCTGACGATCACAAAATACGCGGATCGAACTC GCAACATAAGGAGGTGCTTCTACGTTGGTTTTTCCATCGTCTCACTTGGA AACTTCCTGTACACAATCCCTCACTCCGTTGTTTTTCCGTTCGTGGGGCG ATCTTTGCAAGGATTTGCCGATGGCATGCTTTCCGTAAGTTTTGGTGAAG TGTTGAGAGTTTATCCAGAGGATCAAGCAGTGGAGAAAATGTCATTCCTT GTATCCAGTTTTTACGCGACTTTCCTGATGGGACCAATGTTTAGTTTGGT TTTCAGCAATGTGGATATTCATGTCTTGGGCATCCATCTCACGGTCACAA ATCTACCGACATTGATCATTGGGTTTCTTTGGTGGATATGTATCTTCTTG AATTGGTTGTTCGTTAGAAATTTATCCAAAGAATATGACTTGAAAGCAGA AACTCGAAAATATGAAACCTCTACAGGTGAAAAGACTGTCTGCAGCAAAA TCTCTACAGACGAGGAACCTGGTGACAACAAAGATGATCAAATGACCATC AGACGATTGTTCTCATCCAAAGAGTTTCGGATCATTCTTTCAATCAACTT CCTCTGTGCGTACGCTGGTGTTGGATATTATGATGCTGCGTTACCATTCA TCTGCAAAAATTACTTCGAGATGAAAGTCCAAACAGTTACCATATTGTTT GGTGCAAATGGCGTCGTATTCGTATTGATGTTGGTTTTCATTTTGAGAAG GATCAGCTTACAAAACAATGAAATATATATTATCATAGTTGGATTGGCAA TTTTTATCATGGCAATACAATCAATGGCTCTTTCAGCTTTGATGAGTCAA GTTCGGAGCATCGGAATTTCTTTTCTTGTTCTCTACACAATAACTAACGG AATTAGCTGGTCGGTGGAGCAGGTTTTGCTTGGAGTGGTTGTCGCAAAAA TGATTCCCTCGAGACATCAAAGTTATACTGAAGGGATCAGGCGATCTCTT AGTTCATTGGCGTATATTATGGGTGGATTAGTAACGCCCTTATTAAACGA ATACTTGGTGGAACAATTGAACTTTTTCTCTGGCATTTTATTTCTGAACG TCCTTTATTTGTTTACAAGCGACCTCAAGTTTGAACCGCAATGG

Coding sequence (CDS) from alignment at sc0000021_pilon:1607063..1608406-

>XLOC_037171 ID=XLOC_037171|Name=XLOC_037171|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2688bp|location=Sequence derived from alignment at sc0000021_pilon:1607063..1608406- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTAAAAACAAAAGAAGAGCTTAAGAAATGGGAAGCATCGCGAAA
GAGAACTTACATTCTATTCTGTTTCTTTCTTGGTTTGATCGGAACAGAAT
ACTCAATCGTTGTTCCATCTTTGTTGACTTATTTACGTGACGTCATCAAG
GTCGAGTATGAGAAGACATGGTTTGCTTTGATCACCGCTGCTTATTGGAT
CTCATCCATGGTGAGCAATCTGACGATCACAAAATACGCGGATCGAACTC
GCAACATAAGGAGGTGCTTCTACGTTGGTTTTTCCATCGTCTCACTTGGA
AACTTCCTGTACACAATCCCTCACTCCGTTGTTTTTCCGTTCGTGGGGCG
ATCTTTGCAAGGATTTGCCGATGGCATGCTTTCCGTAAGTTTTGGTGAAG
TGTTGAGAGTTTATCCAGAGGATCAAGCAGTGGAGAAAATGTCATTCCTT
GTATCCAGTTTTTACGCGACTTTCCTGATGGGACCAATGTTTAGTTTGGT
TTTCAGCAATGTGGATATTCATGTCTTGGGCATCCATCTCACGGTCACAA
ATCTACCGACATTGATCATTGGGTTTCTTTGGTGGATATGTATCTTCTTG
AATTGGTTGTTCGTTAGAAATTTATCCAAAGAATATGACTTGAAAGCAGA
AACTCGAAAATATGAAACCTCTACAGGTGAAAAGACTGTCTGCAGCAAAA
TCTCTACAGACGAGGAACCTGGTGACAACAAAGATGATCAAATGACCATC
AGACGATTGTTCTCATCCAAAGAGTTTCGGATCATTCTTTCAATCAACTT
CCTCTGTGCGTACGCTGGTGTTGGATATTATGATGCTGCGTTACCATTCA
TCTGCAAAAATTACTTCGAGATGAAAGTCCAAACAGTTACCATATTGTTT
GGTGCAAATGGCGTCGTATTCGTATTGATGTTGGTTTTCATTTTGAGAAG
GATCAGCTTACAAAACAATGAAATATATATTATCATAGTTGGATTGGCAA
TTTTTATCATGGCAATACAATCAATGGCTCTTTCAGCTTTGATGAGTCAA
GTTCGGAGCATCGGAATTTCTTTTCTTGTTCTCTACACAATAACTAACGG
AATTAGCTGGTCGGTGGAGCAGGTTTTGCTTGGAGTGGTTGTCGCAAAAA
TGATTCCCTCGAGACATCAAAGTTATACTGAAGGGATCAGGCGATCTCTT
AGTTCATTGGCGTATATTATGGGTGGATTAGTAACGCCCTTATTAAACGA
ATACTTGGTGGAACAATTGAACTTTTTCTCTGGCATTTTATTTCTGAACG
TCCTTTATTTGTTTACAAGCGACCTCAAGTTTGAACCGCAATGGATGGCT
TTAAAAACAAAAGAAGAGCTTAAGAAATGGGAAGCATCGCGAAAGAGAAC
TTACATTCTATTCTGTTTCTTTCTTGGTTTGATCGGAACAGAATACTCAA
TCGTTGTTCCATCTTTGTTGACTTATTTACGTGACGTCATCAAGGTCGAG
TATGAGAAGACATGGTTTGCTTTGATCACCGCTGCTTATTGGATCTCATC
CATGGTGAGCAATCTGACGATCACAAAATACGCGGATCGAACTCGCAACA
TAAGGAGGTGCTTCTACGTTGGTTTTTCCATCGTCTCACTTGGAAACTTC
CTGTACACAATCCCTCACTCCGTTGTTTTTCCGTTCGTGGGGCGATCTTT
GCAAGGATTTGCCGATGGCATGCTTTCCGTAAGTTTTGGTGAAGTGTTGA
GAGTTTATCCAGAGGATCAAGCAGTGGAGAAAATGTCATTCCTTGTATCC
AGTTTTTACGCGACTTTCCTGATGGGACCAATGTTTAGTTTGGTTTTCAG
CAATGTGGATATTCATGTCTTGGGCATCCATCTCACGGTCACAAATCTAC
CGACATTGATCATTGGGTTTCTTTGGTGGATATGTATCTTCTTGAATTGG
TTGTTCGTTAGAAATTTATCCAAAGAATATGACTTGAAAGCAGAAACTCG
AAAATATGAAACCTCTACAGGTGAAAAGACTGTCTGCAGCAAAATCTCTA
CAGACGAGGAACCTGGTGACAACAAAGATGATCAAATGACCATCAGACGA
TTGTTCTCATCCAAAGAGTTTCGGATCATTCTTTCAATCAACTTCCTCTG
TGCGTACGCTGGTGTTGGATATTATGATGCTGCGTTACCATTCATCTGCA
AAAATTACTTCGAGATGAAAGTCCAAACAGTTACCATATTGTTTGGTGCA
AATGGCGTCGTATTCGTATTGATGTTGGTTTTCATTTTGAGAAGGATCAG
CTTACAAAACAATGAAATATATATTATCATAGTTGGATTGGCAATTTTTA
TCATGGCAATACAATCAATGGCTCTTTCAGCTTTGATGAGTCAAGTTCGG
AGCATCGGAATTTCTTTTCTTGTTCTCTACACAATAACTAACGGAATTAG
CTGGTCGGTGGAGCAGGTTTTGCTTGGAGTGGTTGTCGCAAAAATGATTC
CCTCGAGACATCAAAGTTATACTGAAGGGATCAGGCGATCTCTTAGTTCA
TTGGCGTATATTATGGGTGGATTAGTAACGCCCTTATTAAACGAATACTT
GGTGGAACAATTGAACTTTTTCTCTGGCATTTTATTTCTGAACGTCCTTT
ATTTGTTTACAAGCGACCTCAAGTTTGAACCGCAATGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037171XLOC_037171-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021_pilongenomesc0000021_pilon:1607063..1608406 -
Properties
Property NameValue
Aaloc1-1344:1345