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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000324_pilon:163919..169663- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037145 ID=XLOC_037145|Name=XLOC_037145|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5745bp|location=Sequence derived from alignment at sc0000324_pilon:163919..169663- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAGGGACAGTCTTTTAAAACGTAAAGAAAAGGAGTTATCCAACTG
TGCCGATTCCATGAAAACAGCCCTTCAGAATGAACTCAAAGAACAAGGAT
CCAGACTGGGAGAGGTATTTATAAAAACTTTCTTGTGCTCAATCTATTAG
AATGCGTACTAATCCGAGCTCGTTGATATTTTAAGTGAGTAAGTTTGCAA
CCGCAGTCGAGAGCGACCCGAAGGCTCCTTTTTCTCTAGCTGAAGGTAGG
GGGAGGGCGCCACTCCTTTCCCTGGATCTCTCCATTTGCCCTTGATCCAT
CTCTTTAATTGCTGAGCATCAAGCATAGAGGCATCAAGTATCATTTTGGA
AATCTTTGGTATGACCCGGCTGGGGATCGAACCCACAACCTTGCGCACCG
TAGCTGGATGCTCTACCTTCATGCTATTGATATTTTAACCAGACAGCCAG
TTCTAAATGTGATCCACTTGAGTAAGTGTAGATGTTTTTTCTCCCTTTAA
ATAAAGTTGATGTTTTTGCTCCTTTTAGGAATCGGATGAAAGACTGAAAG
AGTTGTCGAATGAGAATAAGAAAATTCGAAATACAATGAAAATTCTGACA
AAATCAAATGAAAATGTTAGAAAACGTGTAAGTTAGGATTGATTAGCCCT
TTTAGCGTTCTGGGGAGGGGGTCTAAACAAAAATGTTGAATAACTTAAAG
ATTTCAACCTAGCCAATAATTTACTGATGCCTTCATTGTCTTTGAGAATT
CCCGAAAAATAGGACCCTTTCATATTTATTTTGCATTCTTTTGTTTAAAC
CTTTTAATGCATTGCATCACCACAGGATAATTATTTTTGAGGCACGATGG
GCTAAGGGCTAGTATAGTCCACATAACTTCTCATCATTACTTTTGAATGA
ATGGTTTTTATGCATTTATATCTTAGGCTGAAGAAGGTGAATTAAAGATA
CAGAAGTACGAAGAAAAAACTCAGAATCTCCAAAACCGAATCTCAAATTT
GCAGGTACCCTAATCTGAATTGATCTGTATGACGTTTTTCTGTGTTTCTT
ATTTCGACTTCAGAGCCGTTTTGTTTGTTCCTTACGGGATTTATATTAAA
ACTTGTTCTCTTTCATTTATTCAGCGAAAGGTAGAAATCTTACAGGACCA
GAACAAGAAGCAGACATCACAAACAAAATATTCATCTAATAACAGCGGTA
ATTGTCTGGACCTTTGACCTGTTATAGACAGTTTTGTTTTTCTTTATAAT
TCTTTAAGTAGTGTTTTTGATAACTAAATTCGTTGGATTATTTATCTTTA
AATATCAAGCTACGAATGACACTGTAGACTCCCTGTGATTGAAGCTTATG
TTATTAATGGATGAATATTCTTCACCAGAATTCTGAACAAAAAATACTTG
TTTATTTTTGTAGATAGAAAGATTTCAATACCGTCTAAAGAAGAAACAAC
AGTACGTTCGCTTTGATTTTTTTTCTTGCGGCATTGCATGTGGTGTAGTG
ACGATACTCATAGGTTCATAGGTGTTTGAAGGTGCGAAGGTATCTATCCA
GGGATGATTCGGATGGTTCACTTTTTTTCTCTATCTATTCATATTTCAAC
TTCTATTTCAGCCTGTTTTCTACGAGGTTTTTGGTTCAACGTTGCAATGG
ATATCAGAAAAGTATCTCACTACGAACATAGTGAATTTAATCAAACATAA
ACCTCAAAGTGAACATGATCCCTCTGTAGAAGTGACCAATGAAAAATTTT
TGAAGGTGCGAAATTTTAAAATATTGTATGAAAGTAAAAACATTAATTTG
TTTCCAATTCTTATCAAGACATTTCATCGGTCATTCCAGTCACCAGTCTC
AGTTAAAACATTAGACCATTTCTATTAATATCCATACATCAAATTTTAAC
ATTTTCCAGCGGATATTCGATCAATTTCAAAGGTTTTGGCTTGAAAAGGT
TCATCCACCCCCTGTATCGACATCAAATTGAACAGCAAATTTCAGTAGCC
GAATCAAAGAATTTGCTGAGGTTTTATAAAGGGTTTTAATCTGAAGTTTT
ATGAAACTATACCTTACGCCAGGGCATACTCTGCTACATAATACATTGTC
GTCATTTTCTCTCAGGTTTTAGTCTTGCTGCCCCGTATTTTACCGCAAAT
TGGTCAACTGCAAACAGACGTACAGCTGGGATATCTTCAATTCATTTATT
GGTCTATTCTTCATGCTGGCCTTTCCCAATCTTCTCAGGTTAGTTGCCTT
GAAAGAACATTAGATACATAGTTCGACTTTTGGTTTTTGTTTTCTCCAAG
AAGGAAGAATTGTACAAATTGTACAAATCACAGCTAAGCACAAATTGTTA
TATGAGCCCCCGCCCCCAGCGGACCTTCAATTCACGCAATCACGCAATTT
TTTTTCAAAAATTCACGCATTCACGCAATGTTCTTTTGCAATTAACGCAA
TTTTTGTTCACGCAAAGTTTCCCAACTCACACATTCACGCAATTTTTTTT
TATTTTCACGTATACGCATTCACGCAAACTGCTGGGGCCCCTTATATTAT
GAGATTTGATTATATTTTCCCTCTCTCTTCCAGAAATATTGCCATTCTGC
TACTTATCGAAGAATTGGAGAAGAATTATACCAGCCCTCTTTGGTACGTT
TGCTTTTTTCTCAGTTTTGTCATCTTTAAAATAAAAAAACACTTTGAAGA
ACTTGTTGAACCTTTAAAGTACCAATGACGAGTATACTAGACATTGGCTA
TTTAGGAGGCTGTAATGCACAGTTTGAGTTAGAAATCGTCATTTTTGGTC
TAACTCGTAGGAATTGGATTGGGTTTCATGGTCAAGCAAAAAAAAAATCA
AAAGTGAGTCTTTCCAGCGAGATTTTAAGCCAAAAAGTCAAAAAAAATGC
AAAAATTTGACAAAAATCCACTTTTTTGAGATTTTGACCGTTTTTTGACT
ATTTTTGGTCAACGAATGATCCAAGAACCTCCAAATTTGGCTCTGCTTTA
CTTGATTCTGTCCTCCAGCGTATCAATTTGAAGTTTTACCATTGGGCATC
TTTCTATCATTCAGGCAGGTCCGCGCAACTTTAATTCCCTTTACCGCCGC
CCAACCCGTCCTTCCTAAATCGGGAGGCTCTAAGCTATCCAACGAACTAT
AAACGAGCTTCTAACTCTTTCTAGATCCCGGAGATAAGCCTTTATAAAGT
TTGAACTAGCGAATTTCTTTAAAAAACTTTGAAAAAAATGACCGTGGTAC
TTAAAGGGTTAAATGCTGTTTCTTGGTTATTTTTAACAAATTTCTTTTTC
GTCTCTTTTAGGCTCAGAAGGATAAAGAAACATCGCCTTCTTTTTACCGC
AATAAAAATGTCCACGTTAGATTGCTTTCAAAACTGATCTTGTTGTATAC
CATTACACAAGGTAGGTTTCGCTTTTTTAGTTGGTTGGAATGAAAAGATG
TGATTTATAAAATTTACAATGATTTACAGAAAGCATCTGGCGGTAAGATT
AAATTGGTTCTAACTTTCATATTTTAGCTGACGTTTTATCGCAAGTTTTT
CAAACGCTGAATCAAGACTTACGCTTGGAGAATGTAAGTTATTTTTATTT
AGCTCTACCGGCAATTTTTCGGCGTTATTATACACACTTATAACCATGTT
ATTCGCTTACCTCTCTGCTTTGTTGCTTTTTGCTAAACGAGTCCTTTGTA
CTGTTTTAAAAGTTTCTCCTCATATCTAAAAAGGACTTCAGGGATTTCAC
ATTATATTTCACGCAGTAATCAGTACCTTGAAAACTTGTTAATCATTTTT
ATTATTCAGGGGAAGGATTTCTTCATGAAGTACAAAGGAACGTTTGTGAT
TTTCCCTCTCTTCAAACTCACAAATAAGGTATATATTTCTCTTTTTGCTT
TTTCTTTAATTAAAAGTTTCTTGTAATTCCTCGTCTTTCATAGATGATGA
CAATGAACCTATATACTGTTGTCTTCTTTTTCTGGAGCTGGACTAGCAAG
TATTCTAACTAGGGTAGTTATATATTTCATTTTTTAGGTGAATTTGATGA
ATTCGTTGGATATTCTTATGATTTTATCAACAGACTCGCGTAAGCAATAA
CGTATATATTGTTAATTCTTGCCTTCCCGCATCGAATGCCTTTAAACATG
TCATTCTTTTTCCCAACGATTTCCCATCAACTCCTGCCAATCTTTTTTCA
AACGATTACATTTCAAATCACTTCCCTTAAAGTAAAGATTTACTTCTTCA
GCTAATTGATATTTAGACATCCTGTGTACTTCGTTATAAAATACTGCTCT
TTCCTTTTTTTGATTTCATACAACCAAAGCATGTTGTAGATTTATCTCCT
CAACGATGAATTAGAATGATTTTTTGTCGATGATTAAAAAGCTTCATATA
AACAATGATGACAATCACCATTCACACTTCTTTATTTTTCTACAGCCTAT
TTGCAACCGTTCTTGGAAAACCTTAGTACAATGGAATGGGTCCATTCTAT
ACTAACTATCATGAGAAGTAGTATGGGTGATGAAAATATGTTGGAAAAAT
TGAGTCTTCTTTTACAGAGGTTATCCAGAATAAGGTATGACGTAATATTT
ATAGTTTCAAATTGCTTAGTCTAGCAAGCTAGACGACTAATTCAGTCATA
GTAGAAATAAAGCAAAAAATAATGGAGGGAAAAAAATCTAGTCAATTTTA
GTTGACAAAATACAAATACAAACTAAATCCCGTAACAATAATCGTATTAT
CATATAACACCTATACTACTGTATTACACGCATTATAAACGACTCCAGTC
TACAAATTGCTAGGCTTTCTCTATTTTTTTCATTTTTGGTGGATTCTTTA
TTGTTTATGGTCTTAACTTTGTTTTCTTCTCTACCAAAATTACTTTAGGC
GTACAAACTTTCGCGAGCAGAAACTTTCGCGATTTCCGCGAATTCCGCGA
ATTTTGGCCTTTTTCGCGAAAGTAAATGTCTTTGAAAATTCTTAACAGGG
CAATTCGCGAAAGTTTATGCTCGCGAAAAATTCTCAAAAAAATTGGAAAT
CTATAAAACCACGAAATCGTAATAAATATCAAATTTGCGGCATATTATTA
TCTTTTAATGCCTTTTTAAAATCGAAGAGTCTTTGGTGGATTTAGGGAAT
GTTTTTCATTTTTAAGACAATTTTTATTCGAAAATTCTCATCTCTATCCA
ACAATTCGCGAAAGTTTATGCTCGTGAAAGTTTGTACGCCTAAAGTATAA
TAATGTATATAATACTAATAGAAAAAATGCAGCTCTTGTAATATGAACCG
GGCTTATCAACAAGTTGTGATGTTGATGACTCTTCAAAGATTTTTTTTGC
CCGTTCCTCCTCAGTTATCCTACGATACATGGCTTAAATTCTCCTACTTT
TTCAATAAAATCCAACAAAGCCGAGCGATTAACGCAGACACGATACATTA
TCTGGACTGTTTCTTTCTTATTCCTCTGACACTATAAATTTATAAACATT
TAAGAAATGGTGTTCTTGAAAGTCTCAATATCCTGAGGGGTTCCGAATCT
CTGTTTCTAAGGGAATATCGTTCAATTTTCTTGATTTCCCTTTCATTTAG
GAGCAATAAAAGTATATTTGAAGCACTTCAGATGAAGAATGCAATGAGTG
AAATAGCAAGGACAACCAACCCAACAAATGATTTTCTACAATTAAATTTA
CGCTCCATTCTGTTCAATCTTGACTCTATGAAAGTGGCTTACTAA Coding sequence (CDS) from alignment at sc0000324_pilon:163919..169663- >XLOC_037145 ID=XLOC_037145|Name=XLOC_037145|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2580bp|location=Sequence derived from alignment at sc0000324_pilon:163919..169663- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAGGGACAGTCTTTTAAAACGTAAAGAAAAGGAGTTATCCAACTG
TGCCGATTCCATGAAAACAGCCCTTCAGAATGAACTCAAAGAACAAGGAT
CCAGACTGGGAGAGATGAAAAGGGACAGTCTTTTAAAACGTAAAGAAAAG
GAGTTATCCAACTGTGCCGATTCCATGAAAACAGCCCTTCAGAATGAACT
CAAAGAACAAGGATCCAGACTGGGAGAGGAATCGGATGAAAGACTGAAAG
AGTTGTCGAATGAGAATAAGAAAATTCGAAATACAATGAAAATTCTGACA
AAATCAAATGAAAATGTTAGAAAACGTGAATCGGATGAAAGACTGAAAGA
GTTGTCGAATGAGAATAAGAAAATTCGAAATACAATGAAAATTCTGACAA
AATCAAATGAAAATGTTAGAAAACGTGCTGAAGAAGGTGAATTAAAGATA
CAGAAGTACGAAGAAAAAACTCAGAATCTCCAAAACCGAATCTCAAATTT
GCAGGCTGAAGAAGGTGAATTAAAGATACAGAAGTACGAAGAAAAAACTC
AGAATCTCCAAAACCGAATCTCAAATTTGCAGCGAAAGGTAGAAATCTTA
CAGGACCAGAACAAGAAGCAGACATCACAAACAAAATATTCATCTAATAA
CAGCGCGAAAGGTAGAAATCTTACAGGACCAGAACAAGAAGCAGACATCA
CAAACAAAATATTCATCTAATAACAGCGATAGAAAGATTTCAATACCGTC
TAAAGAAGAAACAACAATAGAAAGATTTCAATACCGTCTAAAGAAGAAAC
AACACCTGTTTTCTACGAGGTTTTTGGTTCAACGTTGCAATGGATATCAG
AAAAGTATCTCACTACGAACATAGTGAATTTAATCAAACATAAACCTCAA
AGTGAACATGATCCCTCTGTAGAAGTGACCAATGAAAAATTTTTGAAGCC
TGTTTTCTACGAGGTTTTTGGTTCAACGTTGCAATGGATATCAGAAAAGT
ATCTCACTACGAACATAGTGAATTTAATCAAACATAAACCTCAAAGTGAA
CATGATCCCTCTGTAGAAGTGACCAATGAAAAATTTTTGAAGGTTTTAGT
CTTGCTGCCCCGTATTTTACCGCAAATTGGTCAACTGCAAACAGACGTAC
AGCTGGGATATCTTCAATTCATTTATTGGTCTATTCTTCATGCTGGCCTT
TCCCAATCTTCTCAGGTTTTAGTCTTGCTGCCCCGTATTTTACCGCAAAT
TGGTCAACTGCAAACAGACGTACAGCTGGGATATCTTCAATTCATTTATT
GGTCTATTCTTCATGCTGGCCTTTCCCAATCTTCTCAGAAATATTGCCAT
TCTGCTACTTATCGAAGAATTGGAGAAGAATTATACCAGCCCTCTTTGAA
ATATTGCCATTCTGCTACTTATCGAAGAATTGGAGAAGAATTATACCAGC
CCTCTTTGGCTCAGAAGGATAAAGAAACATCGCCTTCTTTTTACCGCAAT
AAAAATGTCCACGTTAGATTGCTTTCAAAACTGATCTTGTTGTATACCAT
TACACAAGGCTCAGAAGGATAAAGAAACATCGCCTTCTTTTTACCGCAAT
AAAAATGTCCACGTTAGATTGCTTTCAAAACTGATCTTGTTGTATACCAT
TACACAAGCTGACGTTTTATCGCAAGTTTTTCAAACGCTGAATCAAGACT
TACGCTTGGAGAATCTGACGTTTTATCGCAAGTTTTTCAAACGCTGAATC
AAGACTTACGCTTGGAGAATGGGAAGGATTTCTTCATGAAGTACAAAGGA
ACGTTTGTGATTTTCCCTCTCTTCAAACTCACAAATAAGGGGAAGGATTT
CTTCATGAAGTACAAAGGAACGTTTGTGATTTTCCCTCTCTTCAAACTCA
CAAATAAGGTGAATTTGATGAATTCGTTGGATATTCTTATGATTTTATCA
ACAGACTCGCGTGAATTTGATGAATTCGTTGGATATTCTTATGATTTTAT
CAACAGACTCGCCCTATTTGCAACCGTTCTTGGAAAACCTTAGTACAATG
GAATGGGTCCATTCTATACTAACTATCATGAGAAGTAGTATGGGTGATGA
AAATATGTTGGAAAAATTGAGTCTTCTTTTACAGAGGTTATCCAGAATAA
GCCTATTTGCAACCGTTCTTGGAAAACCTTAGTACAATGGAATGGGTCCA
TTCTATACTAACTATCATGAGAAGTAGTATGGGTGATGAAAATATGTTGG
AAAAATTGAGTCTTCTTTTACAGAGGTTATCCAGAATAAGGAGCAATAAA
AGTATATTTGAAGCACTTCAGATGAAGAATGCAATGAGTGAAATAGCAAG
GACAACCAACCCAACAAATGATTTTCTACAATTAAATTTACGCTCCATTC
TGTTCAATCTTGACTCTATGAAAGTGGCTTACTAAGAGCAATAAAAGTAT
ATTTGAAGCACTTCAGATGAAGAATGCAATGAGTGAAATAGCAAGGACAA
CCAACCCAACAAATGATTTTCTACAATTAAATTTACGCTCCATTCTGTTC
AATCTTGACTCTATGAAAGTGGCTTACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000324_pilon | genome | sc0000324_pilon:163919..169663 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1147-1290:145 |
| Aaloc | 1009-1143:1299 |
| Aaloc | 955-1005:1709 |
| Aaloc | 886-954:1937 |
| Aaloc | 832-885:2217 |
| Aaloc | 730-828:2435 |
| Aaloc | 670-729:3163 |
| Aaloc | 547-669:3631 |
| Aaloc | 403-546:4135 |
| Aaloc | 367-402:4331 |
| Aaloc | 292-363:4622 |
| Aaloc | 214-291:4820 |
| Aaloc | 115-213:5218 |
| Aaloc | 1-114:5746 |
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