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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000324_pilon:183836..186726- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037144 ID=XLOC_037144|Name=XLOC_037144|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2891bp|location=Sequence derived from alignment at sc0000324_pilon:183836..186726- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTGGATGTTGGGATGGATTTCTTTCTTTGTGAAACGTTACCAAC
ACCTGAGCCTCAGGATGGTGACCTTAACATGATGCAACATTTAAATCCAT
TGGAATTAAGTGTCGGTGATAGCAATTCTCAACGACCAGTCAAACGCAAG
AAATCAGGTAACGTGGCTGACCATGTGAAACGACCCATGAATGCTTTTAT
GGTATGGTCACAAATAGAACGTAAAAAGATGGCTGAATCGTACCCGGACA
TGCACAATGCTGAAATCAGTCGAAGATTAGGTAATTTGTTTTGCTTTTGG
AAAAATTCTTTGTGGACATTTTCATTTGACGTTAAATATAGATTCTTTGA
GCTACACGTTTTTTTTTATAAGAACAAACTATATAAGAACATAAGGCATT
GATGACCAAAATATAAAGAACAAGTTAAGAACATTTTAAGGCTTAAAATT
CAAAAAAGTTACGAAAAATTCCAAGGCTTCAAAATTTTGGAAGTTCATAT
AAAGAAAACGTGTAACACATTCTTTTCAAAACACGAGATCATAGTAAACA
TTTTTCCAAATTTTGAAGTTTTATAAAACAAAACTCTGGTAGCAATAATA
TACACATGTTTTTGCTAGAATGCTGAGATAATGAAAGCTTAAGAGGAAAA
TACTTTAATTGTCCTGAGGTTTAAAGAATAATTTGTCATGAAATGTCAAT
AATCTAATTCGCTATGACCGGCTTTCCGGCACGAAATCCGTACAAAATAA
AATAGCGGTAAGAAGTTCATTACTAAAAGGATCATGCGAATCATGAAAAA
TGTCATGTTTGTTGAAATTCTTGTTTATTATAGCTCAAGAGGATTGCTTC
CTTTTGCTAATTTGTTTAAAGTAGAAGTATTGAAAATTGAACTAGTGCCC
AACTCTCGATTTCTGAAATATGATACTTGTTTACAGTGTAATGTCACTGA
ATTAAAGTATAATCAAATTTCAATGTGAAAAAAACATCTAATAGTAGGCT
ACGTCATATCTTCCTTCGTTTCGAGCTTAAAACTCCTACTCTTTGGAATA
TGCGCACTGCTCTTGTTTTGAATATTGAATTTCTCCGGATACATCGCATG
CGCACTGATAGTGGGGTCGTTTAGCATAATTTACGGGAAAAGAATAGGAT
CTAGCTGAAACTTTCTCCAGACCTTCTCTATAGGATGGTTATGCCTCAGG
AAAAATTCCCCTAAAATCCCACTGGTGGAACATCCCTTTTTTGGGACATT
TCTATTTTCCCCAGGCAAAACCCTAAGGGTGAAATTTTTTGAAAATTTCA
AACTCATTTTCAGACATTATCAAGTATACCATTCGAAAGCTCTCGAAAAA
CTATATAGAAGACTTTTAAACGGGTATAGCCGATTTCATTACCTAACTCA
AGATAATTCACGCAGAAGATGCTATTTATCGTCAATTTTGACCAAAGTGT
GGCGAAAAGTGGAACTTGCGCATGAAATATATCGAGTTAGGTAAGGAAAT
CAGCTATAACCGTTTAAAAGTCTTCCAATAGTTTTTCGAGAGCTTTCGAA
TGGTATACATGATATTTTCTGGAAATAAGTTTGAAATTTTCAAAAAATTT
CGCCCTTAGGATTTTGCCTGGGGAAAATAGAAATGTCCCAAAAAAGGGAT
GTTCCACCAGTGGGATTTTAGGGGAATTTTTCCTGAGGTATAAGCATTCT
ATAGAGAAGGTCTGGAGAAAGTTTCAGTTAGATCTTATTTTTTCCTACAA
ACAGCCTGTATTTTTGTAACACGACCACATTATGAGGCTTTGATGAAACC
ATAGCAGTGCTTATAGACCAAAAGTAAGGCCTAAAAGCCTGGAGCTGTCT
ATTGGGTAAACTAATATAATAGTATCTCTCCCCGCAAGTAGATCACTATG
ATATTTGGATATAAGCATATTAGCAATATCATTCAGTCTATTCCTTACAA
AGTTCATGAAAGCGTTTGCTTTTCTAGATTAGTATTAAACTAATTAAAAT
CAAACTCTTATTTCTTCAGGCAAACAGTGGAAAATGTTGACAGATGATGA
CCGACGGCCATACGTCATTCGATCAGAAAAACTACGTGAAGAACATATGA
GGCGCCATCCTGATTATAAATACAGGCCTAAGAAAAAAGCTAAAGAGATG
GAAGGGAAACAAGGCGCAGCAGCACAAACGAATCAACAACGCGCCAATAA
CACCAAAAATAATACGAATACCTTACTAGCGATTGAAGGTAATAGTTACG
ACAGCACTATGATAAAACTAGGACCATCCACCACGCTCGCTTATAACGCT
TTAAATAGTAAGCATTTATTGAAACCCATCAAACAGGCTAATACTACGAA
TGCAGCAAATGTACCATTACAAAGAATCGAAAGTGCTAAACTGGTTAATA
TCAAAAACGGACATTGTGTAATGACGACTGGGAAGCCATTTTTAACACTG
TCAAGGCAAGTTGGTAAAATCGGTAGTTTGTCATCTTCAGAAGGTAATTT
CTCAATCTCACCACAAAAGAACTCTTTACTTAAAACAACATCAGTTGCAT
CCGGTCAGAAGATGTTTCGTACTCCACTAACGCCCCCGCCCAACGTCCCA
GGATCCTTAGCGTCGCCTGTCGACTTGGAACCTAATCTATCATTTTACGA
CGATTTCAGTGAACTTTTTGATGCCAAAAAGGGCCGATCAAATAGCTCTT
CGAGCGGCGAATTCCAAACAGCACCCACGTGGATCAAAACAGAAAGTTGT
GACTCCGTTGGTGACCTTCCTATATCTCCTTTATCGGACATTAGCACGAT
GGTTGATTTTCCGGACATTTATACGACTCCCGAAGTGTCCGAAATGTTAT
CTGGACAATGGTTAGATAGTAGTTTTGGATTGGGTGTTTAG Coding sequence (CDS) from alignment at sc0000324_pilon:183836..186726- >XLOC_037144 ID=XLOC_037144|Name=XLOC_037144|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2304bp|location=Sequence derived from alignment at sc0000324_pilon:183836..186726- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTGGATGTTGGGATGGATTTCTTTCTTTGTGAAACGTTACCAAC
ACCTGAGCCTCAGGATGGTGACCTTAACATGATGCAACATTTAAATCCAT
TGGAATTAAGTGTCGGTGATAGCAATTCTCAACGACCAGTCAAACGCAAG
AAATCAGGTAACGTGGCTGACCATGTGAAACGACCCATGAATGCTTTTAT
GGTATGGTCACAAATAGAACGTAAAAAGATGGCTGAATCGTACCCGGACA
TGCACAATGCTGAAATCAGTCGAAGATTAGATGGAAGTGGATGTTGGGAT
GGATTTCTTTCTTTGTGAAACGTTACCAACACCTGAGCCTCAGGATGGTG
ACCTTAACATGATGCAACATTTAAATCCATTGGAATTAAGTGTCGGTGAT
AGCAATTCTCAACGACCAGTCAAACGCAAGAAATCAGGTAACGTGGCTGA
CCATGTGAAACGACCCATGAATGCTTTTATGGTATGGTCACAAATAGAAC
GTAAAAAGATGGCTGAATCGTACCCGGACATGCACAATGCTGAAATCAGT
CGAAGATTAGGCAAACAGTGGAAAATGTTGACAGATGATGACCGACGGCC
ATACGTCATTCGATCAGAAAAACTACGTGAAGAACATATGAGGCGCCATC
CTGATTATAAATACAGGCCTAAGAAAAAAGCTAAAGAGATGGAAGGGAAA
CAAGGCGCAGCAGCACAAACGAATCAACAACGCGCCAATAACACCAAAAA
TAATACGAATACCTTACTAGCGATTGAAGGTAATAGTTACGACAGCACTA
TGATAAAACTAGGACCATCCACCACGCTCGCTTATAACGCTTTAAATAGT
AAGCATTTATTGAAACCCATCAAACAGGCTAATACTACGAATGCAGCAAA
TGTACCATTACAAAGAATCGAAAGTGCTAAACTGGTTAATATCAAAAACG
GACATTGTGTAATGACGACTGGGAAGCCATTTTTAACACTGTCAAGGCAA
GTTGGTAAAATCGGTAGTTTGTCATCTTCAGAAGGTAATTTCTCAATCTC
ACCACAAAAGAACTCTTTACTTAAAACAACATCAGTTGCATCCGGTCAGA
AGATGTTTCGTACTCCACTAACGCCCCCGCCCAACGTCCCAGGATCCTTA
GCGTCGCCTGTCGACTTGGAACCTAATCTATCATTTTACGACGATTTCAG
TGAACTTTTTGATGCCAAAAAGGGCCGATCAAATAGCTCTTCGAGCGGCG
AATTCCAAACAGCACCCACGTGGATCAAAACAGAAAGTTGTGACTCCGTT
GGTGACCTTCCTATATCTCCTTTATCGGACATTAGCACGATGGTTGATTT
TCCGGACATTTATACGACTCCCGAAGTGTCCGAAATGTTATCTGGACAAT
GGTTAGATAGTAGTTTTGGATTGGGTGTTTAGGCAAACAGTGGAAAATGT
TGACAGATGATGACCGACGGCCATACGTCATTCGATCAGAAAAACTACGT
GAAGAACATATGAGGCGCCATCCTGATTATAAATACAGGCCTAAGAAAAA
AGCTAAAGAGATGGAAGGGAAACAAGGCGCAGCAGCACAAACGAATCAAC
AACGCGCCAATAACACCAAAAATAATACGAATACCTTACTAGCGATTGAA
GGTAATAGTTACGACAGCACTATGATAAAACTAGGACCATCCACCACGCT
CGCTTATAACGCTTTAAATAGTAAGCATTTATTGAAACCCATCAAACAGG
CTAATACTACGAATGCAGCAAATGTACCATTACAAAGAATCGAAAGTGCT
AAACTGGTTAATATCAAAAACGGACATTGTGTAATGACGACTGGGAAGCC
ATTTTTAACACTGTCAAGGCAAGTTGGTAAAATCGGTAGTTTGTCATCTT
CAGAAGGTAATTTCTCAATCTCACCACAAAAGAACTCTTTACTTAAAACA
ACATCAGTTGCATCCGGTCAGAAGATGTTTCGTACTCCACTAACGCCCCC
GCCCAACGTCCCAGGATCCTTAGCGTCGCCTGTCGACTTGGAACCTAATC
TATCATTTTACGACGATTTCAGTGAACTTTTTGATGCCAAAAAGGGCCGA
TCAAATAGCTCTTCGAGCGGCGAATTCCAAACAGCACCCACGTGGATCAA
AACAGAAAGTTGTGACTCCGTTGGTGACCTTCCTATATCTCCTTTATCGG
ACATTAGCACGATGGTTGATTTTCCGGACATTTATACGACTCCCGAAGTG
TCCGAAATGTTATCTGGACAATGGTTAGATAGTAGTTTTGGATTGGGTGT
TTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000324_pilon | genome | sc0000324_pilon:183836..186726 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 283-1152:871 |
| Aaloc | 1-279:2892 |
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