|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000324_pilon:310758..316439- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037141 ID=XLOC_037141|Name=XLOC_037141|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5682bp|location=Sequence derived from alignment at sc0000324_pilon:310758..316439- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGCAACTGAACAAATATCTGGAAACATTGAATCAATCGTTGCAAA
CATGGCACTTGCACACGAAATGATCATGAACGATGACTTTCAACTCACAG
CTTTGAACGAGGCTTCTGAAAACAGCAGGTTTATTTTATATTTTCTTCTT
AATTTTCCTTTGAAGAAATGAGACAAAATGTTTAGAGAATATGCTGTTTG
GCTGTACTTCTTAAAATTGTTAAAAATAGCACTTTGTATTGGAGATTTTT
CATTTTTATTCCAGATAAAAAACTTTCACGCTATTCAGTTTTAAATGTTA
AGTCACACTAGACTACACTCATCATGCTGCAAACAACGACTTGTTACCAA
TCTTTACTGATCATTTCATAGTTTCTACTGGTCCATCTGAAGCTTTTACT
GTTTCTATTCTGTCCGGTTAAAAGTCTTATACCGTGAGAGGTCCTAAATC
CGACACCACTGCCTAAATCCGATGGGGTCTTTCAAAGATACAAACTAAAA
TAAAAACAAACCTTTTGCTGTGACGCAACGAAGATACCAAAGTGTCAACA
AAACTGAGAGATTTGATACACTGAACCAATTGAACCAAATAACAATAATT
TTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTCCAGCAGAAAAACA
ATGATAAAACCATGTATAATTATTACAATATGCATGATGCAGTTATTATG
CATGGCTCTATCATAGTTTTTATGACTGGACTACATAATTATTCAACAGG
ACGTCCTCTTTGAAAAAAGGTCTATTTGCTTCTTATAACAAAACAAATAT
TTTTTTATTGCAATATGCACAACGTCATAAATGGCAACAGTAGTAACAGC
ATCATAAAAAGTAATGAGATGTTTTGATTTTCCAAAGCAGACAAAAATAT
AAAAGAGGTCTGTGTACGAGTGTGCTCATTTTGAAACGTTACGTAATCAA
GCCTGGTTTTTATTACTTTACACTGGCACTTGGCTTGATTGCGGGCCTTC
CGTAAATAAACATCCGGACTTATGGGTGGTAAAGAGGGCGTTGATAGTTG
CCGCCTCATTGATTCAATGTTTGTTATTCAAATTAAGTGCTACCGCATCC
GTCCCTTTTTTCAACTTTGCGCCATTTTTGCTATTTAGTCTGTTTGTTTC
TTGATGGAAACCAGCCCAAGTAGTTTCGTATTTTTCCCGCACAAGTCACT
TTTATTACAAAACTGTTATCGTTTTAAAAATGAGCAACTGATCCAGAATA
AAAGGTAATCATTTTTACAACTCACACTTTTTAATTACATTAATTGACAT
CTTGACATTACAGCTATCTTGTTAGATGTTTTGTTTCGAGAGTTCTAGCA
ATAGTTTATCGTTCAACTTGGAGAGGGAATGTTTGTAAACATTGAATTCT
TTTTCATAACAGTTATTTGGGGGGTCGGAATTAGGCAGGGGTGTCAGATT
TAGGACCTCTCGCGGTATTTTGAAGCAGAATCTAAAATCTTAGCCCGGTT
TCTCAGATTTCTCAAAATCAGAAATCAGGAAATTTTAAAATAGGGGAAAC
TTTTTTTCCAAAAATCAGAAAAACGGGGGAGTTTTTCTCAAAAATCGAAA
ATGCGTGGAGAAATCAAACTTTTCAAAAATTAGGTGAGGCAATGTGGAAA
TGCGTGAGTCTCATGCCCTATGCGTAAGAGTTGGCACCTTTGAAGATTAA
AAGTTACGAAAAAAACCTATATATACCGTAAGTTGGTCTAATGTCGACAT
CCGTCTTCTAATTTCGACACCCTTCTTTAGAGATAGGAACAATAGAAACT
GAGGAAGCTCGGAATCGCTGATTGACTTTGATTAGCGCAATGAGAGGAAA
AAATCTTTAGTCTATCAGTGATTTCGACCATCTTATTATTCCAATCTATA
AAGAAGGATGTCAAAATTAGAAGACGGATGTCGACATTAGACCAACTTAC
GGTATAGGTTTTTTTCGTAACTTTTAATCTTCAAATTACCAATATAATAC
TACTTTGAATATTATCTTAAGATAAATTCAATTTGAAAAATATAAATGCC
AATCAAAGGGTCATTTCAGACTCAAGAATTTTTTCATTTCCCTTCTCAAA
TTATTCTTACTACGCTCAAAAAATTACTGTCCAACTGAAATTCCTTATTG
ACAGCACTGGACTAGCTTCCTGTAAAAAATGCACACAAAATATTAAATGC
TGTGAAAGCACTTAATCATTTACTTGACTCATATGGAAAGAATATGCCAC
AAAATCTCTAAAGCAAAGAGACTTGTGAAAAATAACTCAGCGTTTTTTAG
TGAAATTTACATTTAATCAAAATAAATTGACCTCTACGCCTCCATTTGAA
AAGTTAATTTACAGACAACTTTGCAAGAAAAATATCAACAGGGGAGAAGA
CACTCACCTAGATAATTGCACCACACCAACTTACATCCTTTTTGTTGGAA
CGCATCATTTAGACCATGTACAGACGTTACTCTTTCAAATTGTTTCAGTA
TGCTCTCCGTTACGGATCGAGAGTGATGTTTCAGAACATTTCGAAGTTAT
AAAAAGGAGCAGTTCAGTTTCAAAGAAAATAGTGGAGCAAAACTGTTTTA
ATCTGTTTTGCTTTGTTATGTCTGGGTGAACTTTTATTCCGAACCTCAGA
GTAGTTTGACTAACTGACACTACCCAAAAAATCATATGAAAAAAGAATTG
CAGGGGCTTCTTCTCTAGAACTTGCTGTCTTTAAGGTACTTCCAGCTCTC
TTCCTGGAAAAATATAATATCTAATCTTTTTTTTTTTTAATCTTAAGGTT
ATTTTGAAAAAGTAACTCAATTTCTTTATTTTCTAGTTTGGAGAAAAGAA
TTCATGATGTCTTACATAAAGCATTCTGGGATGTATTAGAAGAAGAAGTT
AAAAGCGAACCGCCTGAATTTAAAAATGCATTCAATCTTTTAATGGAAAT
GAAAATGGTAAGTTATTCTTAAAATTAAATTTTAATTTTATTTGTGACTC
ACTAGGAGTTGAGCTATTTTTCACTTCTAGATTTCTATGTTAAAATTTGG
AACTTGCAAGGAAAAGTTATAGCCAAAATATCTATATTATTAGAACTAAT
CTTATATTATGCTAGGTAAAAAATCAGTGTTTTTCAGAAAAAACCTGTTT
AAAGGTGTGGTCTGATCAGATTCTTTTGAAAAGATTTATTATTGAAAACT
GTATAGTATAATTTTAAATTCCTGAACTTTTTTAGGCTTTATTTCTGTTA
TCGATAAGCAAATTATCAGTATAATTTTTTTTTAGAAATTACTTCTGAAA
TTGTCTAGCTTGTTTTAAATTCTTTTTATTATTTCATCAGCTTATTTTGG
AAATAATTCCGAAAAGTAAGGCTGCAAGTGCAATGCGTACAGAGATAGAA
GAAACCCTTGACGAGGAACTTATAAAACAACAGATTGATCACAATGCATT
TGATATTGTATCTTGTGCCTCATTCATACTTTCCACACTTTCGAAAATTT
GTGCTCCAGTTCGGGATGCAAGAATTAAAGCACTTAAAGCAAAGACAGAC
CTTGTACCTCTACTAAGGTAGGCAGTTATATAATATTTTTTTAATTCATT
ATCAAATATTTTAAATTGTTTGAAGAATTGAAAATTTTTGCTCAAAATGT
TTGTCACTTCTTTTCCTTTTCCTCTGATTCATTTAACTTTTTTTTAGAGG
GACATTTGAATTAATCAACCTGATGAAAATCGACATCGCGAATTATGAAA
TCAAATCTATAAAACCCATCCTTATGAAACAAGCAGTAAAATATGAAGAC
GAAAAGTTCAATGAATTCCTAAAAGAAAACAAAGGTTAGTTAGATGAGAT
TTCTTTTATGGAGGGTATTCAGCATCAAAATAATTTTCTGTTTTCATTTA
CTCGCCTTCTAGAGGTCTTATTGCCAAATTGTTTTTACTTTTTTTCTTTT
TAGATGGTTTAAATTTGACAAAAATTTGGCTGAAAAATGCATTGGATATT
ATTAACTCAATCAGGAGTCCATCTTCCCAAAACAAAGTTACCCCAGGGGT
TGTCATAACAAACGCTTACTTGTCATTGTTATTTCCAACCTCTGAACTCT
GCCCTGAGGTTAGTTTCATGAATATATCTTTCTATTTTTTGCTATAATCA
ATTTAAATAATAAATTGATTAAAAATATAATCAATTAAAAAAATTCAGAC
GTTATTGTCTAAAGTTTGTTTATATTTAAAAAAATTGTTTATGACATGAA
GTTAATGAATGCTTTAAATTTTTATTTTCGATTCAGACTTTATTTATGGA
TGAACTTCGTTTGAAACAAATTTCTGGACAGTTTGAAGTCTTGATCAATA
CAGTGTCTTCGTTGACGTATTGTTTACATTTTTTGCCGCCACACCTCTCC
ACTGATGAAGACTTCATTATTCATTTAAAGAAGACTATTTTTATACTCAT
TCAAGGATCTAAATGGTAAATATACAAAATATTCATTATTGAATGTTACA
TTCAAAATATTTTGAATCCTTTCTATAGAAATAGTAATGAATAGGCTAAA
ATATTCATTCTCCCAATATTGAGAGGTCAAACATTGAAATTCAAAGTGAT
TCCATGTAATTAAGCTCCCGTTATATAGTTATAATGACCACGTAAGTACA
ATTAAGATAGCCAGGATATACCTGTCGGAAATTAACTCGTGTTTTCAATG
TCGTTGATACCTTTTTGATTGTCCCGACATTTCCTGTACATCTATGAAAA
AAGCAATCATTAATTCGATAGTTAACTATTGAAAAATCTAGCAAAGGTTT
GATACCTGTTTGTAAACAATAAATCTTTTGTTTTGAAATAAATAAAAATG
AGCTAATGAGTCTCGGTAACTTCCGTCAAGCTCCGTAACATTTTCTTCGT
GGATTCATAAGGTTTTTGGATAGGAATTAGGATTGAAAGTAATAACTAGT
CTGTACATCCAGTTTGAGTTAATTTTAATGTTACAATCATATCGTTTTTT
TTCTTAGGGATGAAACTTTGGTTGAAAGTATTTTCTTGCAAATACAGACA
GAGACAGAAAAAGAATGTAGCAAGCGTGAGATTGAATTGAAGACGCCAGC
CCAGTGGGATATTTTGAGGAACCAACTGAAAGGTTTACTAACAAACGACA
AACAAGAACCTAATCAACTCAAAACTCTCATCAGTAAGTTCCAAATAAGC
TATATTGATTGCTCATTTTGATTTTCTTGCGGAATTGATATAATTCATTT
TTGTTTTCATATTTTTTATTTTAATCCAAGACGTTATTTAAAAATAGAAA
GATTTCGATAAACTTTATCGTGACTAATAATACCCCTCGAAGTTAAACGA
AACAATCATTTTTTAAAGATATTTACCGTTAATCAAATAAAGTCATAAGA
TGTCCTCCTTTACTTTTAGAGTCAAGAATACGGGACTATGTTCTACTTTC
GATGACGTCACAGACGCTTCAAACGCCGATGTTTACAGTTTTAGCGCCCA
TTCAAAACGAACTTAAAGAATTGAGCACTCGTTTCGTCCGAGTTGTCAAT
CATAACAAACAAGTGCATTGTGCGAGATATATGGACATTGTTGAGGAACT
TCTCGGAATTAAATCGGACGATGATTCCGATTCAGAATCCGAAAAGGAAA
TCGGGGAAAATTCGACTGATAAAACGGAATAA Coding sequence (CDS) from alignment at sc0000324_pilon:310758..316439- >XLOC_037141 ID=XLOC_037141|Name=XLOC_037141|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2772bp|location=Sequence derived from alignment at sc0000324_pilon:310758..316439- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGCAACTGAACAAATATCTGGAAACATTGAATCAATCGTTGCAAA
CATGGCACTTGCACACGAAATGATCATGAACGATGACTTTCAACTCACAG
CTTTGAACGAGGCTTCTGAAAACAGCAGATGTCTGCAACTGAACAAATAT
CTGGAAACATTGAATCAATCGTTGCAAACATGGCACTTGCACACGAAATG
ATCATGAACGATGACTTTCAACTCACAGCTTTGAACGAGGCTTCTGAAAA
CAGCAGTTTGGAGAAAAGAATTCATGATGTCTTACATAAAGCATTCTGGG
ATGTATTAGAAGAAGAAGTTAAAAGCGAACCGCCTGAATTTAAAAATGCA
TTCAATCTTTTAATGGAAATGAAAATGTTTGGAGAAAAGAATTCATGATG
TCTTACATAAAGCATTCTGGGATGTATTAGAAGAAGAAGTTAAAAGCGAA
CCGCCTGAATTTAAAAATGCATTCAATCTTTTAATGGAAATGAAAATGCT
TATTTTGGAAATAATTCCGAAAAGTAAGGCTGCAAGTGCAATGCGTACAG
AGATAGAAGAAACCCTTGACGAGGAACTTATAAAACAACAGATTGATCAC
AATGCATTTGATATTGTATCTTGTGCCTCATTCATACTTTCCACACTTTC
GAAAATTTGTGCTCCAGTTCGGGATGCAAGAATTAAAGCACTTAAAGCAA
AGACAGACCTTGTACCTCTACTAAGCTTATTTTGGAAATAATTCCGAAAA
GTAAGGCTGCAAGTGCAATGCGTACAGAGATAGAAGAAACCCTTGACGAG
GAACTTATAAAACAACAGATTGATCACAATGCATTTGATATTGTATCTTG
TGCCTCATTCATACTTTCCACACTTTCGAAAATTTGTGCTCCAGTTCGGG
ATGCAAGAATTAAAGCACTTAAAGCAAAGACAGACCTTGTACCTCTACTA
AGAGGGACATTTGAATTAATCAACCTGATGAAAATCGACATCGCGAATTA
TGAAATCAAATCTATAAAACCCATCCTTATGAAACAAGCAGTAAAATATG
AAGACGAAAAGTTCAATGAATTCCTAAAAGAAAACAAAGAGGGACATTTG
AATTAATCAACCTGATGAAAATCGACATCGCGAATTATGAAATCAAATCT
ATAAAACCCATCCTTATGAAACAAGCAGTAAAATATGAAGACGAAAAGTT
CAATGAATTCCTAAAAGAAAACAAAGATGGTTTAAATTTGACAAAAATTT
GGCTGAAAAATGCATTGGATATTATTAACTCAATCAGGAGTCCATCTTCC
CAAAACAAAGTTACCCCAGGGGTTGTCATAACAAACGCTTACTTGTCATT
GTTATTTCCAACCTCTGAACTCTGCCCTGAGATGGTTTAAATTTGACAAA
AATTTGGCTGAAAAATGCATTGGATATTATTAACTCAATCAGGAGTCCAT
CTTCCCAAAACAAAGTTACCCCAGGGGTTGTCATAACAAACGCTTACTTG
TCATTGTTATTTCCAACCTCTGAACTCTGCCCTGAGACTTTATTTATGGA
TGAACTTCGTTTGAAACAAATTTCTGGACAGTTTGAAGTCTTGATCAATA
CAGTGTCTTCGTTGACGTATTGTTTACATTTTTTGCCGCCACACCTCTCC
ACTGATGAAGACTTCATTATTCATTTAAAGAAGACTATTTTTATACTCAT
TCAAGGATCTAAATGACTTTATTTATGGATGAACTTCGTTTGAAACAAAT
TTCTGGACAGTTTGAAGTCTTGATCAATACAGTGTCTTCGTTGACGTATT
GTTTACATTTTTTGCCGCCACACCTCTCCACTGATGAAGACTTCATTATT
CATTTAAAGAAGACTATTTTTATACTCATTCAAGGATCTAAATGGGATGA
AACTTTGGTTGAAAGTATTTTCTTGCAAATACAGACAGAGACAGAAAAAG
AATGTAGCAAGCGTGAGATTGAATTGAAGACGCCAGCCCAGTGGGATATT
TTGAGGAACCAACTGAAAGGTTTACTAACAAACGACAAACAAGAACCTAA
TCAACTCAAAACTCTCATCAGGATGAAACTTTGGTTGAAAGTATTTTCTT
GCAAATACAGACAGAGACAGAAAAAGAATGTAGCAAGCGTGAGATTGAAT
TGAAGACGCCAGCCCAGTGGGATATTTTGAGGAACCAACTGAAAGGTTTA
CTAACAAACGACAAACAAGAACCTAATCAACTCAAAACTCTCATCAAGTC
AAGAATACGGGACTATGTTCTACTTTCGATGACGTCACAGACGCTTCAAA
CGCCGATGTTTACAGTTTTAGCGCCCATTCAAAACGAACTTAAAGAATTG
AGCACTCGTTTCGTCCGAGTTGTCAATCATAACAAACAAGTGCATTGTGC
GAGATATATGGACATTGTTGAGGAACTTCTCGGAATTAAATCGGACGATG
ATTCCGATTCAGAATCCGAAAAGGAAATCGGGGAAAATTCGACTGATAAA
ACGGAATAAAGTCAAGAATACGGGACTATGTTCTACTTTCGATGACGTCA
CAGACGCTTCAAACGCCGATGTTTACAGTTTTAGCGCCCATTCAAAACGA
ACTTAAAGAATTGAGCACTCGTTTCGTCCGAGTTGTCAATCATAACAAAC
AAGTGCATTGTGCGAGATATATGGACATTGTTGAGGAACTTCTCGGAATT
AAATCGGACGATGATTCCGATTCAGAATCCGAAAAGGAAATCGGGGAAAA
TTCGACTGATAAAACGGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000324_pilon | genome | sc0000324_pilon:310758..316439 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1126-1386:262 |
| Aaloc | 949-1122:675 |
| Aaloc | 769-945:1397 |
| Aaloc | 616-768:1728 |
| Aaloc | 478-612:1985 |
| Aaloc | 250-474:2343 |
| Aaloc | 130-249:2846 |
| Aaloc | 1-126:5683 |
|
