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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:484065..488915+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037096 ID=XLOC_037096|Name=XLOC_037096|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4851bp|location=Sequence derived from alignment at sc0000086_pilon:484065..488915+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTTCATGAAAGGCAAGATCTCAACAGGTGGTACATCCACACAATA
TGAAACAGTGGAAGACTCCAAAGATTTGAGGATACCTGTCCAAAGTGAAG
AAGCTTTCGAACATGGAATCAATTTCAAATGCAAGGTAGttgttagactg
gagtcgtttaatTCCCTTTAATACACTAATATGGGTGCTATAAGATGATA
CAATGAtagttacgggataatatcagttttaCACTAATATGGGTGCTATA
AGATGATGCAATGAtagttacgggataatatcagttttaCACTAATATGG
GTGCTATAAGATGATACAATGAtagttacgggataatatcagttttaCAC
TAATATGGGTGCTATAAGATGATGCAATGAtagttacgggataatatcag
ttttaCACTAATATGGGTGCTATAAGATGATGCAATAAtagttacgggat
aatatcagttttaCACTAATATGGGTGCTATAAGATGATACAATGAtagt
tacgggataatatcagttttaCACTAATATGGGTGCTATAAGATGATACA
AAAAtagttacgggataatatcagtttagTATACTTCAATTTGCCCTTTT
AATTTTCTACTTTGTCTGATTTATTCGTCTACATGCTGGACTAGTATATA
ATTGGTTGATGTTCTATGGGGCTTACTAACACAAGTCAAAAAGCAGTAGC
CAAAAACTATAGTAGTTATCAAGGGGTGTCAACCGTTATTTggtaatacc
gagtttatgtatcggaggatatcgacggcgacggtaagtgaaatcgatac
aaaacaaagtcggtagttgatgtacggctctatatcgcctttgctcaccg
aAACAGacgtttttaccgtcgtcgagcaaagtggacggcgatttcggccc
tatgtcagctttgctttataccgtccccctcgatttatctcgaatacata
aactcgctaattgACTTCAAGCTCTCAGTTTTCTAGGAGCCACTCCTGAA
ACTCAATTGGCCAATTGTAACTTATTACACCAAGACATCagcaaaattaa
taaatttttatttttgtttttcagtatATTGGTACGGAGGAAATACCACG
TCCAAACAGTCGTGTGGAAATTGTGGCTGCTATGAGAAGGATAAGAGTAA
GAAAGATTTTCTTACATATATCACTAAGTCATTATTTGAGAATTAAACCA
AAAATCTTCACCGAGTCTAACTTgcatgaatgaataaaaaatctttcatg
gCCTAAGCAAGTCATTTTAGCGTGACTTGAAACTAAGAGCTCGAAAAGTT
CATTTTAGATAATGTCTGAATTTTGACCATATTTTTTCGACAAGAATCAC
AGAGTTTGGTCCTGTTTTGAAGTTTTGTCAACCTCTAAGATATTAGAAAG
AAACTAACTTGAAACCACCCTGAGCTTTGGACAGTTTTTTAGAAGCACtt
tcaaatctttattttcCAGTACGAACACAAATATCGAAATATAAAGAAAA
GGAAAGTGTTCGTCGATATTTCTGCGGATGGCATCAAAGTCacaataaga
aagaaaaagaaaaaggtacaaAGAATCGATTGGTTTATTTCCGATATTTC
ATATAAATATTACTAACATCAACGTTCTAGATCGTCACTATCACCTTGTC
GTACAATCATTGGTCTTTAACCTCTGATTGCCGGAGCcttttttgatatg
ttttagaAAGGTTACAAGGTCATTTAAATGTTAAAGCGCCCCTACAATAT
TCTCCCTATATTCCAATGAAAATTAGGCCTACTATAGACAAAAGTATGTC
TCCATCGTGAATTGCAAAGTTCCTCGTTTCATTTCAGAATGTTAAACCAG
ACGAGAGTACACTTTTTATCATGCAATACGCCATTAACAGGTATTTTACA
GGGATGGTTCAAAACTTGTCAGTGTTGCTTTAAATCTTCATTATTTTCAA
TCCATTCTGTATGTAAATAGTTTGAACACTGATACTGAGAACAGGATTGC
GCTATCGTGATTCTCGGAATcagctgaaaaatataaatGGGCTATATTAC
AGTCTATCATTGGTTGTAATgtgaacaaataaaaaaagagctCGATACCa
gtgataaaaaaatcaaagatagagctaattttgagaaaaaagagaatatA
GAATGGCATAGGGAAGCCAAATCGATTCCGCCAATAACAATTGATTGATG
ATTGGGACTGAGTAAGTAAGATATCAACTGGTAACAACGACAATTTAAAT
TTCACGCCATGGTTACCCAttggaaatctttgaaaaagttcattcaattg
tttttctcttttttatctcAGGGTGTTTTACGTTTCACACGATTCACaag
atttaaagattttcagtTACATTGCACGCGGTGAAGATGGGGTCTTCAGG
TGTTGTGTATTTAAAGCCCTCGGTAAAGTAAGTgcttttatttatctttt
tatggCTGAATCGCCAACACCGTACACCGTAAAGTTGCATTTTACTGCTA
AGCTTTTAAGCTAAAAAACGCGATTTGATGTCCTGCAGTAtttttttGTG
GTTGTTATGATAAAGGGTTTTCATGGTCGGAGGGGAGAAGAATTGACCAT
TTCTTAGTCTGGTATGTAATTGGTATGGTAAGGTAATTCAGCAAAATTGG
AATTTTGGAACCCAAAACAGGGGAGACAgaaaattggtcatttttaTCCG
GAAAAACGGAATCGGGAATTTCAGAGTTTCGTTTcataaaacaaatttca
aataaattctCGTTGGccaatttttggttttcttttggACGATATGATTT
ACATCTGCTTTGTTTTCGACACAGTCGCAAGCGATGCACGTCGTTCGAAC
TATCGGGCAAGCATTCGAAGTGTGTCACAAGATCAACAAAGTTCGAGATA
AGACGACGTCGCCAACAGATGAAAAAGAATCACCGATACATTCAGACAAA
ATAGACGCACAAATTACTGATACCGACGAGAAaagtaagaaactttttct
aCATCCTGTCCAAAATGGAAGATTTCGATTATTTAGACATATAATTATAT
TGTCTTTGCACAGTTTGGCGAAGTTCTTGTGGGATTAGCATTTTGTTCGG
AGCTTCTAGATTCGatttatgataaattttcaagCTAACGTTTCCCGGTT
AGGCTATCAAACCAACTTCATCGGTAAATTTATTCTAGTTCTAGAGacta
taaaaatgaaactttactTAAGGCAGAAGTAGCACTGACTATTTAATTAC
TCGATAAATTCTTTCTCCGACAAAATATACGAAAGTTCCCGATTAACCAA
GGTATTCTTCGTAAACTTCTTCCCTAGGCCCAGAAGAGACGGATATAGAT
GACGTATGCGAGTCAGACATTGATTCTCCCAACATCAAAGGAGGAACACA
TGAACTACAACCATCCACCTTAGTGACAGATATCGATAACGTTCGTAATT
TGAATGAACTCCCTCCACCTTTGGTGCCAACAAAACAAGTTCATGGAGTG
GTAcggttttcttcattttcttgagctatttcttcattttcttgagctat
ttcttcttcttttcttgaTGTGTACTTCAATAACATTATGGGAAAGTCGT
TGATTATACCGTTAGAAACTTCTCCGTTTTTTCGAATACCCTGTCCTCGT
AATGTAAGAAACATCGGGATAAACTGAAAAATTACTTCTTCAACATTGAA
TTCGGATAGTCGTGATAGGTGTTAATATAAGGTGTCCCCAAATGTAAGTT
ACAGACATTGATTTAGTTCGGATTGTTTAAATAATGGAATGTTTAAATAA
CATAAAAAGGGTTAATTAAGCTTCAttttttttACTCCACAGCCGATGCC
TTCTTTGGTGAACGGGCAAGTTGGAGGAGAGAAGCATGGTGCTTTCACTT
TACAACAGATACAACAATTGTATCACCAACAACTCCTACAACAAATCAAT
GAGGCCGATACCGCGCGCAATGAACTCTCACGCGTTCGCGCGCAACTCAA
AGTCGAAATGGATGCAAGGAGTCAAGCTCAGGTATGACGAATCTTACTTC
AgcttttttttggtgatttcaatAATTGGTTTTGGCTTTTTTACGATTCT
GACGATCACAGGGCGTTCTAGTTATAGTGACATTACTGTATCCTTTCATG
GCAATATTCAACAATAATTGTTACCTTGGTATACTTTTTACAGGGTTATT
TCTTATAATTATAATATCCTTTTACcatgaattttttatttgtatatGGC
CAATCAGCAaatatcttcttctttttcatttcagcaaCAAGTTCATCGTT
TACTGGCACAAAACCGTGAGATGTTGGTCATGATTCAACGTTTGATGTCT
CAAGTATCCGACAAATACGCCAAAGACAACAATGAACCTTTAAACGAAAC
ATGGATCCTCTCTGAACTCTCCTCCAATTTTTCTATGAACAGTTCATCGA
ACCTGTACAAAACCGATTCATTGACCAATAGTAATTTACTGGGATCTCGA
AATATAGACTTTAGTTCACAAGTTTTCGATAATTCCAATATAGGACCTAG
TCCATCACATAAGAACGTTAATGTTGATCCAATAACGTCACCTTTCAAAG
GAGCATTTAATCCGGAATCGTCTGGTATATCGAGTCAAAATGGTAGTATC
TCGACAAATGGAGGTTTCACGTCAACACAGGATATCGAGTCAAATGTAAA
AGCGAGTAACCCGTTCGCCAGTGATGCTTATAAATTGACTTTTGGAACTT
CATTTAACAGTTCACACAATCCGCAACAGACTTCTTTAAATTCGACCATG
AATTCCACTGATATAGTCAACAATAATGCTAAATCGACGTTGATTCAATA
A Coding sequence (CDS) from alignment at sc0000086_pilon:484065..488915+ >XLOC_037096 ID=XLOC_037096|Name=XLOC_037096|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3102bp|location=Sequence derived from alignment at sc0000086_pilon:484065..488915+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTTCATGAAAGGCAAGATCTCAACAGGTGGTACATCCACACAATA
TGAAACAGTGGAAGACTCCAAAGATTTGAGGATACCTGTCCAAAGTGAAG
AAGCTTTCGAACATGGAATCAATTTCAAATGCAAGATGAATTTCATGAAA
GGCAAGATCTCAACAGGTGGTACATCCACACAATATGAAACAGTGGAAGA
CTCCAAAGATTTGAGGATACCTGTCCAAAGTGAAGAAGCTTTCGAACATG
GAATCAATTTCAAATGCAAGtatATTGGTACGGAGGAAATACCACGTCCA
AACAGTCGTGTGGAAATTGTGGCTGCTATGAGAAGGATAAGAtatATTGG
TACGGAGGAAATACCACGTCCAAACAGTCGTGTGGAAATTGTGGCTGCTA
TGAGAAGGATAAGATACGAACACAAATATCGAAATATAAAGAAAAGGAAA
GTGTTCGTCGATATTTCTGCGGATGGCATCAAAGTCacaataagaaagaa
aaagaaaaagTACGAACACAAATATCGAAATATAAAGAAAAGGAAAGTGT
TCGTCGATATTTCTGCGGATGGCATCAAAGTCacaataagaaagaaaaag
aaaaagAATGTTAAACCAGACGAGAGTACACTTTTTATCATGCAATACGC
CATTAACAGAATGTTAAACCAGACGAGAGTACACTTTTTATCATGCAATA
CGCCATTAACAGGGTGTTTTACGTTTCACACGATTCACaagatttaaaga
ttttcagtTACATTGCACGCGGTGAAGATGGGGTCTTCAGGTGTTGTGTA
TTTAAAGCCCTCGGTAAAGGTGTTTTACGTTTCACACGATTCACaagatt
taaagattttcagtTACATTGCACGCGGTGAAGATGGGGTCTTCAGGTGT
TGTGTATTTAAAGCCCTCGGTAAATCGCAAGCGATGCACGTCGTTCGAAC
TATCGGGCAAGCATTCGAAGTGTGTCACAAGATCAACAAAGTTCGAGATA
AGACGACGTCGCCAACAGATGAAAAAGAATCACCGATACATTCAGACAAA
ATAGACGCACAAATTACTGATACCGACGAGAAaaTCGCAAGCGATGCACG
TCGTTCGAACTATCGGGCAAGCATTCGAAGTGTGTCACAAGATCAACAAA
GTTCGAGATAAGACGACGTCGCCAACAGATGAAAAAGAATCACCGATACA
TTCAGACAAAATAGACGCACAAATTACTGATACCGACGAGAAaaGCCCAG
AAGAGACGGATATAGATGACGTATGCGAGTCAGACATTGATTCTCCCAAC
ATCAAAGGAGGAACACATGAACTACAACCATCCACCTTAGTGACAGATAT
CGATAACGTTCGTAATTTGAATGAACTCCCTCCACCTTTGGTGCCAACAA
AACAAGTTCATGGAGTGGCCCAGAAGAGACGGATATAGATGACGTATGCG
AGTCAGACATTGATTCTCCCAACATCAAAGGAGGAACACATGAACTACAA
CCATCCACCTTAGTGACAGATATCGATAACGTTCGTAATTTGAATGAACT
CCCTCCACCTTTGGTGCCAACAAAACAAGTTCATGGAGTGCCGATGCCTT
CTTTGGTGAACGGGCAAGTTGGAGGAGAGAAGCATGGTGCTTTCACTTTA
CAACAGATACAACAATTGTATCACCAACAACTCCTACAACAAATCAATGA
GGCCGATACCGCGCGCAATGAACTCTCACGCGTTCGCGCGCAACTCAAAG
TCGAAATGGATGCAAGGAGTCAAGCTCAGCCGATGCCTTCTTTGGTGAAC
GGGCAAGTTGGAGGAGAGAAGCATGGTGCTTTCACTTTACAACAGATACA
ACAATTGTATCACCAACAACTCCTACAACAAATCAATGAGGCCGATACCG
CGCGCAATGAACTCTCACGCGTTCGCGCGCAACTCAAAGTCGAAATGGAT
GCAAGGAGTCAAGCTCAGcaaCAAGTTCATCGTTTACTGGCACAAAACCG
TGAGATGTTGGTCATGATTCAACGTTTGATGTCTCAAGTATCCGACAAAT
ACGCCAAAGACAACAATGAACCTTTAAACGAAACATGGATCCTCTCTGAA
CTCTCCTCCAATTTTTCTATGAACAGTTCATCGAACCTGTACAAAACCGA
TTCATTGACCAATAGTAATTTACTGGGATCTCGAAATATAGACTTTAGTT
CACAAGTTTTCGATAATTCCAATATAGGACCTAGTCCATCACATAAGAAC
GTTAATGTTGATCCAATAACGTCACCTTTCAAAGGAGCATTTAATCCGGA
ATCGTCTGGTATATCGAGTCAAAATGGTAGTATCTCGACAAATGGAGGTT
TCACGTCAACACAGGATATCGAGTCAAATGTAAAAGCGAGTAACCCGTTC
GCCAGTGATGCTTATAAATTGACTTTTGGAACTTCATTTAACAGTTCACA
CAATCCGCAACAGACTTCTTTAAATTCGACCATGAATTCCACTGATATAG
TCAACAATAATGCTAAATCGACGTTGATTCAATAAcaaCAAGTTCATCGT
TTACTGGCACAAAACCGTGAGATGTTGGTCATGATTCAACGTTTGATGTC
TCAAGTATCCGACAAATACGCCAAAGACAACAATGAACCTTTAAACGAAA
CATGGATCCTCTCTGAACTCTCCTCCAATTTTTCTATGAACAGTTCATCG
AACCTGTACAAAACCGATTCATTGACCAATAGTAATTTACTGGGATCTCG
AAATATAGACTTTAGTTCACAAGTTTTCGATAATTCCAATATAGGACCTA
GTCCATCACATAAGAACGTTAATGTTGATCCAATAACGTCACCTTTCAAA
GGAGCATTTAATCCGGAATCGTCTGGTATATCGAGTCAAAATGGTAGTAT
CTCGACAAATGGAGGTTTCACGTCAACACAGGATATCGAGTCAAATGTAA
AAGCGAGTAACCCGTTCGCCAGTGATGCTTATAAATTGACTTTTGGAACT
TCATTTAACAGTTCACACAATCCGCAACAGACTTCTTTAAATTCGACCAT
GAATTCCACTGATATAGTCAACAATAATGCTAAATCGACGTTGATTCAAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:484065..488915 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 985-1551:4285 |
| Aaloc | 796-984:3843 |
| Aaloc | 625-795:3330 |
| Aaloc | 463-621:2825 |
| Aaloc | 358-462:2323 |
| Aaloc | 304-354:1838 |
| Aaloc | 208-303:1470 |
| Aaloc | 136-207:1075 |
| Aaloc | 1-135:1 |
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