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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:739649..742315+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037089 ID=XLOC_037089|Name=XLOC_037089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2667bp|location=Sequence derived from alignment at sc0000086_pilon:739649..742315+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACCTCAACTCTCTTTCTCTTTCAACGCAATTTGAAGACGAGTACGA
TGGAAAGAAATATTCGTTCGATTTCAACGCGTTGAAGAAAGTGCAACGAC
GCGAACGAGCCAAGATCTTTCTTTTCATGTTGGTGATTTTTGTTCTGGCT
TCAGCATTAGTTGTCATGACGATCTTGTATCGAAACAAAATGGATGATAA
TAAAGATTTGAGTATAACTTTAACTGCCACTAAAGGTGAGGAGGTTGTCC
AGTTGACAGTACTTACAAAGAGCTAGCTAGTTTATCCGTTCAAGAAAGCA
CTTTACAAAAGGAAAGGGGTCACGACGACATGACAATGCCATGACTCaat
aacttcaaattttcaaacatttttttatataaaatgcgCGTACACACCCT
AATATGAAGTGTGATAGAAAAACAGTGGCGGGATAGGCCGTTGTATGCTC
TAGACCCATCGGTACAGCACCGTACCATACACGATTTGATCAAGTAatcc
atgtttttttttaaataaaccaTATACTCCACTGTTAGTTTCATTCTTCT
TCTTTCAGTAAAACTGACAGCAGCCAGAAACAAAACAGCCAATATCGGTG
AGAAATGTCATTCTACTGGCAACATTACAAAATGTGGAAAAAATGCATAT
TGTAGGAAGTCGAATATTGGCAAATATTTCTGTGATTGTTTGACAGGATA
TATGAGTGATGGATCAGCTGATTGCCAAGGTAATGTCACTTCCCAATTGC
TACATCAAGGTCAAACTGTACTGTATAATGAGGCAGAATGCTCTGAGCAT
AACACaaaaaaaCAagttaatattttgatattatcttTTCATTCCATCTT
GTGCGGTTTGCATCAATGCCAGTATTTGATAAATCTTGAGCAATAGCTAC
AATATCATTTTTATAATGCAAAATCCTAAACAATGAATTAATACTTTTGG
TTTTCATCTTTCATCTATCGAGCTCTTTTTGCTTGCCATTTGCGAATCGT
GTGTGTGACCTATATATATTTTGCTTGTAACTTGTGAATTGAGTGACcta
cacgttttcttataagaaccggcaggtacaaaatgcataaaacataatgc
atattgcataatgcataatagtactGTGTAAGCCTTTTAGGATGTACTTT
GGTTGAGAGTTAACTCCGAGCCTTCAAAACAACAGAAAGGGTTTCCCTCA
GCATTTATAAGTAATAAGAAAATGCAAACAGATCAGAAAGATTTCCCCCa
tctttctttctcaaaaaggGTATAAAtacacaaaatttttgaaaaagatt
gaagtctattttctttgatctattTTCGATGAAGCTAGTATGTTTGTATT
GGGTGGatttggcttatctaacaaaaagcattcacatttaatgctttgta
agagggaaaacccgtCGAATTTAGCAATATTGTTTGTTCGAAAAGAGCTC
TGACCTGAgaaacccagaataaagatcttgcttaAAAGTACGTTTCGAGT
TagagtaatatacggaggagatattttcgtctTTTTTCTACACtaactac
gttctgtaaaatacaactatgaaaaccaaaatggcgacaagcttTTCAGG
GAtcatttttcttcatcatccaaattcaaatttacagtttctttcccttt
attttctggagaaaatattttgttttgttaaagtattatctttcaattCT
CCTTATAGAAAAATtggcatttttcaaatttatgcattttatgcaatatg
catatgttttatgcattttgaaccTGCCGccataagaaaatccaaaattt
ttgaagcttggAGGACTTTTTGGAGTTaactcttaaaatgttcttaTTtt
tgatacTttttgagtatttttatccattttcctaagaaattgggTgtTTT
AAAGTCAGCAAAgccttagaattttCttaacttGttcttgatATTTTAGC
AATCGAAACCTTAGGTTTTTATGTAATTTgttcTtataaaaaaacgtgta
cctcaATCGCTTCGCAACTCTTTACACATACACAAGTCATCTTGTAAGAT
AGTAAATACGAAAAGTTAgtaaattcacttttttcgtTTCAGATGTTCAT
TTTTCGATCGACTTCAAGGAACCAACTACCAATCATCTACCAGAATTACG
ACGACTTCATTTCTTACAAAGTGACGCTTTATCGATATGTTTCTGGTTCA
AATTAAACAATGCTTCTCATTCGAGGTGGATGTCAGCTTTCCTATACACC
TCTGTTGAAATTGAGGGTGATAATGATCTCTCTATTTGGGTCACCAAAGA
CCAGGCTCATGTTTATTTGAAAAGCTCTGGCAAGAGAATTGCCCAAACAA
CATTCCCAGAGAATGAATGGTCTCATTTATGTTGGATATGGGAAAATTCA
GGTCGTTGGTTGACCTATGTGAATGGAGATTTAAAGAAAGCTGGTTTCGA
AGCCAATGATAAATTTCAATCCTCTTTTCCCGACAGTTTAGGAAATCTTG
TGCTTGGCCAAGATAAAGATGAAGATACGATCAACCAAGACGCTCAAATG
TTGCATGGTTCTATATCACAATTCATGATTTATAACAGTATGTTAACCAG
AGATGACGTGGTAGCAGTTTATCAGAATCGGGCGCCCATTGACAACATTG
TGGTTGGTTGGTGGCAG Coding sequence (CDS) from alignment at sc0000086_pilon:739649..742315+ >XLOC_037089 ID=XLOC_037089|Name=XLOC_037089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1962bp|location=Sequence derived from alignment at sc0000086_pilon:739649..742315+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACCTCAACTCTCTTTCTCTTTCAACGCAATTTGAAGACGAGTACGA
TGGAAAGAAATATTCGTTCGATTTCAACGCGTTGAAGAAAGTGCAACGAC
GCGAACGAGCCAAGATCTTTCTTTTCATGTTGGTGATTTTTGTTCTGGCT
TCAGCATTAGTTGTCATGACGATCTTGTATCGAAACAAAATGGATGATAA
TAAAGATTTGAGTATAACTTTAACTGCCACTAAAGATGAACCTCAACTCT
CTTTCTCTTTCAACGCAATTTGAAGACGAGTACGATGGAAAGAAATATTC
GTTCGATTTCAACGCGTTGAAGAAAGTGCAACGACGCGAACGAGCCAAGA
TCTTTCTTTTCATGTTGGTGATTTTTGTTCTGGCTTCAGCATTAGTTGTC
ATGACGATCTTGTATCGAAACAAAATGGATGATAATAAAGATTTGAGTAT
AACTTTAACTGCCACTAAAGTAAAACTGACAGCAGCCAGAAACAAAACAG
CCAATATCGGTGAGAAATGTCATTCTACTGGCAACATTACAAAATGTGGA
AAAAATGCATATTGTAGGAAGTCGAATATTGGCAAATATTTCTGTGATTG
TTTGACAGGATATATGAGTGATGGATCAGCTGATTGCCAAGTAAAACTGA
CAGCAGCCAGAAACAAAACAGCCAATATCGGTGAGAAATGTCATTCTACT
GGCAACATTACAAAATGTGGAAAAAATGCATATTGTAGGAAGTCGAATAT
TGGCAAATATTTCTGTGATTGTTTGACAGGATATATGAGTGATGGATCAG
CTGATTGCCAAGATGTTCATTTTTCGATCGACTTCAAGGAACCAACTACC
AATCATCTACCAGAATTACGACGACTTCATTTCTTACAAAGTGACGCTTT
ATCGATATGTTTCTGGTTCAAATTAAACAATGCTTCTCATTCGAGGTGGA
TGTCAGCTTTCCTATACACCTCTGTTGAAATTGAGGGTGATAATGATCTC
TCTATTTGGGTCACCAAAGACCAGGCTCATGTTTATTTGAAAAGCTCTGG
CAAGAGAATTGCCCAAACAACATTCCCAGAGAATGAATGGTCTCATTTAT
GTTGGATATGGGAAAATTCAGGTCGTTGGTTGACCTATGTGAATGGAGAT
TTAAAGAAAGCTGGTTTCGAAGCCAATGATAAATTTCAATCCTCTTTTCC
CGACAGTTTAGGAAATCTTGTGCTTGGCCAAGATAAAGATGAAGATACGA
TCAACCAAGACGCTCAAATGTTGCATGGTTCTATATCACAATTCATGATT
TATAACAGTATGTTAACCAGAGATGACGTGGTAGCAGTTTATCAGAATCG
GGCGCCCATTGACAACATTGTGGTTGGTTGGTGGCAGATGTTCATTTTTC
GATCGACTTCAAGGAACCAACTACCAATCATCTACCAGAATTACGACGAC
TTCATTTCTTACAAAGTGACGCTTTATCGATATGTTTCTGGTTCAAATTA
AACAATGCTTCTCATTCGAGGTGGATGTCAGCTTTCCTATACACCTCTGT
TGAAATTGAGGGTGATAATGATCTCTCTATTTGGGTCACCAAAGACCAGG
CTCATGTTTATTTGAAAAGCTCTGGCAAGAGAATTGCCCAAACAACATTC
CCAGAGAATGAATGGTCTCATTTATGTTGGATATGGGAAAATTCAGGTCG
TTGGTTGACCTATGTGAATGGAGATTTAAAGAAAGCTGGTTTCGAAGCCA
ATGATAAATTTCAATCCTCTTTTCCCGACAGTTTAGGAAATCTTGTGCTT
GGCCAAGATAAAGATGAAGATACGATCAACCAAGACGCTCAAATGTTGCA
TGGTTCTATATCACAATTCATGATTTATAACAGTATGTTAACCAGAGATG
ACGTGGTAGCAGTTTATCAGAATCGGGCGCCCATTGACAACATTGTGGTT
GGTTGGTGGCAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:739649..742315 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 409-981:2095 |
| Aaloc | 238-405:561 |
| Aaloc | 1-234:1 |
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