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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000178_pilon:42362..45535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037079 ID=XLOC_037079|Name=XLOC_037079|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3174bp|location=Sequence derived from alignment at sc0000178_pilon:42362..45535+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGGCGGAATTCATCACAGACTTATTTTTGGTTACCAACAAAGACAATGA
TGCTGGTACTTTCTATGTAAGAAAcgctttttcgaatttttagaCAAGAA
ATTGATCAATTGTATACTATTATTTCCgccaaattattttttccagTTAT
CGGCTAAATTAAATCCCCTCTTAGACAATATGACATGGCGTCAAAACTTG
GCAAAAGGAGTCAGTATTATGGCTTAACTCACATTTTATTGTGCATGGTA
AACACAACCTTGTGATTTAACCAGAGtttttattcttaaaataattttta
attctttttggtttaaaagtatttcaaattactttctttGGAAGAAGCAG
GATAGTTGATAGCTCCTGATGTCTAGCTCCAATCAATATATCAAACTTAT
ATTAATAATTAGTTCATGATTTTTCGCATCTCCTTTAGCTCGATACCACG
ATGAAAGGGCACGATGGAAATTTATATGAGAGTAGCTGGCGTCATAAAGG
TAAAAGATTGATAGGTTTCAAGAAAAGTGCAGAAGATGAGTATGTAGTGA
CAGACATTGTTGTTGTGACAGATGATAAAGATGGACCTGATGATTATGCA
CCTATCCCTATCACCAAAGATACTCGTAAGTCGAGGACCTTTCTAGGAtt
ttttttCCTGTGGAATTTACTCaaggaaaaaatgttctttatgaagTTCT
ATAGGCAGTAAGATAAGTAGAAAagaaattacgtcaaaaatctaaaatag
tgTTTAATCTAATCGTCATATCAAGATTTTTAAGTCAGCGTTATTTTTTG
TCCTTGTCTAGTGTTTCTGCAATATGTCAAATGAAACATTATTTGCTTCG
TCTTATCATTGCAGGAGAGAAAGGTCTGAAGAAACATACCGTCTGTTATT
CAAGAGGCCATCGCCAATCGTCAGAAAAAGCGATCACAGAAATCTATTTG
GTCAACCCATCCAAAAATGAAGCAGTTCCACCATATTTTACTGCAGTGAG
GTGATTAAAATACGGATTTACGAACCTAGTTCAAAATTTTAgagcaaccc
ccccccctactctAGGTTTAACCAAAAGATTTATGGAATTCCCTCAAAAT
CGGGGTATCATCGTGATTCTTTCCCACTTTCAAGACATTATGCCCTACTC
ATTTTAACTAAAAAGATAGCATATTCATTCTTGAACAGTATCTCTTCtga
aaattggttgaaatagaTTGTGAGTGAAGCGAACAAgacaatttttatga
ttttaatccAGTCCAAGACTGCAAAACTAGAAATTTACCAATGTATTACT
TATAAAGGGGGGTTGGGGCGAACTATGACGAGTAAGAAAATTCACCAGTC
CTTTCCCATCTAATGGCtttcatattttgtttatttgttatAAACTAACT
GGTCACTTCTTTTTTACTTCAGCGAAACAGTGAACGACATCACGATTTGC
TTCAAAACAGAAGcaattccaaaaatcaaaagaccAGCACCTTCAACTCC
TCCAAAAGAACAATCGCAACTTCTCAATACGTAAGTTAATCAACACGTGT
TTCACTATCTAGTGATATGCAATTTCTAATATTCTAAAAGCAACTGGATA
CGATGcaaaggttgtgggttcgacccCCTCTCCCATACTTATGACCTAAG
ACCTTATGACCTAATGATGCATCTCTGGTTGATCTTAAACTTCTCTGtta
caaatagaataaaaatataCGTTCTGCTCGCATTTCAAatggttttatgt
tttattgtgaaaaaaaaatatctccGCTCAAAGATTTTGCCTTATGTACA
CTCCCAATGTAAACCCTAAATCAGGTGTTACTCGTATTTTCGTTTTATTT
ACTAGGGCACCGAAAGTTTCAGTTAGTTCAGGTAGGACTGAAAATATGAC
TTTATTTACGAAATATTTCTCTATTATGTCGTAATCAGACGCTTTTAAAT
TTTTGCCTTATGCTTGCTTTATATGGTAGCCCCATTTGCTTTTGGCAAAG
GAATGAAATTTCTATGTGATAACTGCAAAATGATTTCATATTTACATTAC
TTTTTTGCCTTTTCTTTCATTCTGTAGGCATAGATGGTGTACCGTTTCAG
ATCAATCCTAAGTTCAACACAAGCTCTGGTGGTAGTGACGTATgttgttt
cttttattcattcTTTATATTCGATATTACCTCATTGTATCTTTCAAAAC
GAACAATCCTGTCTCATCGATGTTCTCCACTGGGAAGATCGATCCAATGT
TTTGATCCCTATTGGGATTCAAATGAAAAGATGCAGTCctaaaccatccc
cactggcgTTTATGAGCTGGAAACAACAGTTCGATGGGAATAGATTTAAT
CGGCATTTTGATCGAAGTTTTCATGCATATACTGAGAAAAGAAAATCCAC
CGGGGGCATTGAGAAAGCGGTGTAAATGAAAACGATTATTTTGTAGCCCT
GAGAAAAGTTTTTAGttcaatcaaaatcaattgtCTTTGCTAATATAACT
AGCAATGATAATGAAGACTTATGTTATAGATATGCCTCAAATCATGATAA
CTAACCTGCTACTTAATCACAAAGTCTGCTTTACTCCAAATAACTTATTC
TGTATTTTCTGTTGCAGCCTTTGATCGCCAATATGCTGTTCGTTTCACCT
GAGGACATACAAAGAAAGGTAATccttaacatttcaaattctCGACTAAC
GAATATTTTGAATTGATATCGATCGTTTGGTGTATCTTCAAACCCTCCTG
TAGCCCCAACCCGCTTTGGATTTAATGTATCTGTCCGTTTTTCTGTTTCA
TAcctttcatttttcttgatcAAGATGTTTAGTTCGTGATAATACTATGT
CgtagtacagtggagtctcaataactcgaaaGCACACAAAAGGGTAACAC
AAATTcgctcgagttaaggaaattttgagtaaTACAGTAAAGCTTATAAG
CCATTGTCAACTGAAGGAACTATAAAACATGTTTGAGTTAGGAAACATTC
GGgttatggaggttcgagttTCCACTGTATCATTGCAATAGTAACTTCAG
CCACATAACTATCCCACGAAGTAGATAACGCGATTTCTTTCCTCTGTGTC
ATTTCGacatcttttttcttcttcttcattagTATCAATATTCATTCGAT
CTTGAACGTGAAGTGACAAGATGA Coding sequence (CDS) from alignment at sc0000178_pilon:42362..45535+ >XLOC_037079 ID=XLOC_037079|Name=XLOC_037079|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1356bp|location=Sequence derived from alignment at sc0000178_pilon:42362..45535+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGGCGGAATTCATCACAGACTTATTTTTGGTTACCAACAAAGACAATGA
TGCTGGTACTTTCTATaTGGCGGAATTCATCACAGACTTATTTTTGGTTA
CCAACAAAGACAATGATGCTGGTACTTTCTATCTCGATACCACGATGAAA
GGGCACGATGGAAATTTATATGAGAGTAGCTGGCGTCATAAAGGTAAAAG
ATTGATAGGTTTCAAGAAAAGTGCAGAAGATGAGTATGTAGTGACAGACA
TTGTTGTTGTGACAGATGATAAAGATGGACCTGATGATTATGCACCTATC
CCTATCACCAAAGATACTCCTCGATACCACGATGAAAGGGCACGATGGAA
ATTTATATGAGAGTAGCTGGCGTCATAAAGGTAAAAGATTGATAGGTTTC
AAGAAAAGTGCAGAAGATGAGTATGTAGTGACAGACATTGTTGTTGTGAC
AGATGATAAAGATGGACCTGATGATTATGCACCTATCCCTATCACCAAAG
ATACTCGAGAGAAAGGTCTGAAGAAACATACCGTCTGTTATTCAAGAGGC
CATCGCCAATCGTCAGAAAAAGCGATCACAGAAATCTATTTGGTCAACCC
ATCCAAAAATGAAGCAGTTCCACCATATTTTACTGCAGTGAGGAGAGAAA
GGTCTGAAGAAACATACCGTCTGTTATTCAAGAGGCCATCGCCAATCGTC
AGAAAAAGCGATCACAGAAATCTATTTGGTCAACCCATCCAAAAATGAAG
CAGTTCCACCATATTTTACTGCAGTGAGCGAAACAGTGAACGACATCACG
ATTTGCTTCAAAACAGAAGcaattccaaaaatcaaaagaccAGCACCTTC
AACTCCTCCAAAAGAACAATCGCAACTTCTCAATACCGAAACAGTGAACG
ACATCACGATTTGCTTCAAAACAGAAGcaattccaaaaatcaaaagaccA
GCACCTTCAACTCCTCCAAAAGAACAATCGCAACTTCTCAATACGGCACC
GAAAGTTTCAGTTAGTTCAGGGCACCGAAAGTTTCAGTTAGTTCAGGCAT
AGATGGTGTACCGTTTCAGATCAATCCTAAGTTCAACACAAGCTCTGGTG
GTAGTGACGCATAGATGGTGTACCGTTTCAGATCAATCCTAAGTTCAACA
CAAGCTCTGGTGGTAGTGACCCTTTGATCGCCAATATGCTGTTCGTTTCA
CCTGAGGACATACAAAGAAAGCCTTTGATCGCCAATATGCTGTTCGTTTC
ACCTGAGGACATACAAAGAAAGTATCAATATTCATTCGATCTTGAACGTG
AAGTGACAAGATGATATCAATATTCATTCGATCTTGAACGTGAAGTGACA
AGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000178_pilon | genome | sc0000178_pilon:42362..45535 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 637-678:3133 |
| Aaloc | 586-636:2618 |
| Aaloc | 526-585:2080 |
| Aaloc | 499-522:1857 |
| Aaloc | 391-495:1424 |
| Aaloc | 256-387:867 |
| Aaloc | 67-252:439 |
| Aaloc | 1-66:1 |
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