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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000178_pilon:12504..16838- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037057 ID=XLOC_037057|Name=XLOC_037057|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4335bp|location=Sequence derived from alignment at sc0000178_pilon:12504..16838- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCACAAGTATCAAGTAAAGTGAATTCCGCCCGACACAACAAACCAGG
GCGTAAAGCAGGGGGCGGACGCAGTTACCACAGACAACCAGGAGACCCAG
AAGCACAACTCATCACCAGAAATGATGATAAAGATCACGATATAGGTTTA
CCAAGACTTGTGGCTCGCATTTGGGGCTTAGTTTCAGGAATTTGTAAGTA
TTTTTGCAGTGCACTCTCATCTAGGCCTTTTAAAAACACAGTTTCTTTGT
AAAAAAACTTCTTATAAGATTCACAAGGCTCAGATTTGCAAGATTTTTTT
ATGAATCATGCTATGGAATGTTGTTCAACCTTTTTCTTCAGTTAAAATCT
TTTGTTTTTCATTTCATTTTATCTATAAAGTAAGTCTCACTTGACCATTT
TGAAATTTGGAGTTATTAGTTTTTGTTTCCTTGATTCTCTTCTTCGTACG
TTCAAGACAATACTTTAAGACAGATATTTCATTGCCCTTTTTTAAAATAT
AAGAATCATTAAGAACATTTTAAGGCTCACTTCGATTTATGTAATTCTTA
TAAAAGAAAAACTGGTGTACTTTCTTGAAGCTAAACACTTCAAATGAGCA
GATACATCAGGGAGCCTTTTTTATTGCTCTAACGTTTCAAAAGCAACCAA
ATCTCAACAGTCATCTGGAAAGCTTGGATGCTATTTTTAGGCAAAATATA
TATAGATAACTCAGAGAAATGGAAAGGGATAGAAAAAGCGCTTCTTGAAA
ACAATGGAAACACGGCTCATCATATACCAGGTCCTTTGCACTTAAGGGAG
TTTGTTTGGAGTAATGGATTTCTTTTGTTGTCGCTTTGAAAACTTTGTAT
AATTAGCGTGGTGTGACGAAATTCTTTTGTTTCAGGTCAAATTATGCAGC
AACTTTAGGGGCTTATATTTTGGGGACATACCATATAAAAAGTACCTATA
TTTTCTTGCTCAGAAGGTTCTAGCGATTCTAATGATATAACGGCATCACG
ACTGCATCATTAGATAAGAAGCTAAAGTTCGAGAAAAAAAGAAAGTAAAT
CTGTTTATGAATTTCTTTCAAATATTCTCGAAGTAACTTGATATCATCGT
GATGAGAATTTTTCAGACTATAAGTTAGTGTAAAATTTGTTCCTGTATAC
TGGAAGTTTAAGAGTACTGTAATGGATCAAAAACAAAAAATATCAATCTA
CTTTTATTAACATAGCCATATATAGAAACCAACCCTCTTCGCATGACGAG
CCGTTTTTTCTGAACCCTTTCTAATTACCCCCGGGGGGGGTGCACTCATA
TAATCTGGCCTACGTCGTGTGCCGCGCTTAAGGGTGGGGTTTTTCAGTAT
CCCAAAATGCACTGTAAGGGTGTGTTTCTGTGAGATTGCACTGCAAGGGT
CGAATTTTAAAACAAATTCAAAATAATTGTTAAATAGAAAGCTTTTTACT
TCTCGTTTGTTTGAAAAAGTTTCTTTTGTCTGATAATTACAGCTGACAAG
AATAATTTTCTCAGTTTTTCTTTGAAACAGAAAATTTTCCAAACTTCTTC
TTCCACGCAGATTTACAGCTGAGAAATATAGTGCACTATAAATCACACTG
AAAGGGTACCTTTTCAGCCATATTGAACTGCACTGTAAGGGTACCATTTT
GAAAAGCAGATTTTGCGCGGCACATACCGTCGTCTCGAAATCGAATGCCT
GCCCCCCCCCCGGGTAATTACCTAATTAAAGCTAAAACAAAGGAGTTTTC
AATAGAAACGATCAGAACACTGGGTAATCAGAGAAGCGCTTTTTCTATTC
CTTTTCATTTCTCTGGATAACTGGATGATTGTGCGCTTGAAGATGTAAAC
AATGAGATTTTTTTCTTTTACAGCGTATGTGAGTAATGGAGGATATTTAT
TGGTCGAATCATCAGCCGGTAACGAAAAATGTCAGGCTGCTGGTGGCTAT
ATGATGTAAGTGAGTTGCGTTTGAACAACTGACCTTTATATGCCCTGGAC
ACAGTTTCTTGATCCCGACAATAAAAATCTTTCATCGGAGTTATTTCAAA
GTGATACCCTAATTGTAGCACTACCCTGATTGTAGCACTACTCAATGTTG
GTAAAATCTCCATTGAATTACAAATTGACCCATATTGGGTAATGTTTAGG
GTGCCACTTTTCTAAGAACTCTGATCGCAGATGGCGGATAGCTTGATAGC
TTGGTCCAGTGTATATAAAGTTCAGTGGTGTGACGCAGCTTTGAGCCATG
GTGGAATGACTAAAATTGTTTCCGACTGGCTTCCCGACTGAATTTCCCTT
GACTTTTCATTTCACGATCAAAACATTGAAATTAAAAAGTTGAAAGGCTT
TATACTGTGCTGGCTTGAAACTAGACATCATTCTCCTAAAATGGTCTCCT
ATTCTCTACGAAACCAGTAAACCCGGAAAGGCTGCTTTATTGGAATGCTT
ACTTTTGATAAGACTCGAATAATTTCTCTCCAAAACTGTCAATTAAAACT
TCTGACCCTATAAATTATTTTTCATGAAAAAATATTTTGAAATTGTAAGA
AGTTGAAGGAAATCTCCCTCACGATTTCATTTTTCTTCTTGTTTTAGATT
CGCAGGGTTAGTGATGATCATCATGGAATGTGGTTGTTGTATTATGCAAA
CCAAGAATAATTGTTGTGATGACTTCGAAAAGAAATTCCCCTTCTGGGCC
AGAGGACTAATTTATCTTTTGTAAGTACTAATTATCGCATTACACCCCTG
TATCAGTTAACCCGCGGCAATTTTTCAACCAGTTAGAACGACAATCTAAG
TCCTAGGCTGGGCGTGGTTTTATAAAAAAGAGTTTTCAAATTCGAAAATC
CGAGTTTTTCATGATAGGGTTGAAAATCAATCTCTACTTTCTCAACGTGA
AAATATATTTTCTTAGGTAGAGTGCTCTTTTAATACGTGTATTTTCAGTG
GGAGCCTATTACGCGTACCTATGGACCAAGAGTAAAACGTAAAAGCTTGG
GCATGTCGATTGTGCAGACTCATTCTATAATCTTCTCTTTCAGATCAACA
ATACCAGCTTTAGCATTATGCTTTGGTACCAAAACTTTGATCACTTCAAT
CATTGTTATAACACTAGCCTTGATTTATATCTTCTTAACGTGTTTAGTTA
GGTAAGTTTTCTTTGTTTTGTTTTTTAATTATTTTTAATTTTAAAAAAAT
CTAGTGTTAGGTCTGCATCCATCGCTTTTGAAGGACAATATATCTTTAGA
AATAAAACCTCATTAGAAAGAAATTTTTTCAAAAAAATCAAAAATGAAGA
GGATTTCAACTAGCTATTTAGATTTTTGATATCCCTCTAGCACTACAAAA
AGGGTCCCATTTTGCATATTGTGCTGAATTAACAAAAGCTCAGTGTTTTT
CTTTTCCTCTTTCTGACCGACCTTACTCCACATTCGTGTCAATTCAATGG
GATGAATCTTTAAAATTAAAATTGACGAGTATAAACAAAGATCACTCTTA
TTAAAAAAAAACAACGCCTTTAATATATTTTTTGAATAATTTTTTTAAAA
CTCATGAATTTATTCGCTCAAAAATATTTTTCCGACAACCCAAGGTTTTG
CCTTCAAGATGCAATATGTATCAAAATGAATCAAGTTAAAAATTTTTCAA
GAGCAAACTTTACCTTGAAGGACTGACTAAATGTCTCCATACCTCGGGGT
TCAAGGAAAAAATAAGGATCAACATTTTACCTTATGGGAATTTATTTTGG
CGAGAACTTATTTTGGCGATTGATGAATTTTTTTAATTTTGGCGGGACCT
AAATTTGGCGAATGACAGCGTAAATCTGTTCTTTTTTGCCTTTCATTCAT
TTTTCACTTTTTTTGTGAACTCAAGAAGCTATTTAGACAAGACACCAAAA
AATTTAATTTTGGCGAGTGAGCAAAATATTTAATTTTGGCGGGAACTAAT
TTTGGCGAGTTTTGTCTTAATTCGCCGAGTTTTCCAAAACTAGTTCCTAC
CAAAATAAGTTCCCTTCAGGTAGTTGGAAGTTGGATATTCTCAAGAAAGG
TCCGTCAAAAACTCGTTACTGCTCCGTTAATTCATAAATGACAATTCTTT
TCACAGGAGTAAGCGTTACGAACGTTTACGTGGAGCAGCACGTGCTCGTT
ACGAGGGAGCTAAAAAAGACAGTAGTTTGACTTACAGTGCTATGAGTGGT
GTAAATGCTACAGTTAATTATATGAAAATGAACTCTCCCAAACATGGGAA
ACATGGTAGAGGACGGTCTGGAGGTGGTGGTCGATCCTCAGGTGGAAGGT
CAAAAAAACCTAGGACTCATTCAGCACACACGTGA Coding sequence (CDS) from alignment at sc0000178_pilon:12504..16838- >XLOC_037057 ID=XLOC_037057|Name=XLOC_037057|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000178_pilon:12504..16838- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCACAAGTATCAAGTAAAGTGAATTCCGCCCGACACAACAAACCAGG
GCGTAAAGCAGGGGGCGGACGCAGTTACCACAGACAACCAGGAGACCCAG
AAGCACAACTCATCACCAGAAATGATGATAAAGATCACGATATAGGTTTA
CCAAGACTTGTGGCTCGCATTTGGGGCTTAGTTTCAGGAATTTATGCCAC
AAGTATCAAGTAAAGTGAATTCCGCCCGACACAACAAACCAGGGCGTAAA
GCAGGGGGCGGACGCAGTTACCACAGACAACCAGGAGACCCAGAAGCACA
ACTCATCACCAGAAATGATGATAAAGATCACGATATAGGTTTACCAAGAC
TTGTGGCTCGCATTTGGGGCTTAGTTTCAGGAATTTCGTATGTGAGTAAT
GGAGGATATTTATTGGTCGAATCATCAGCCGGTAACGAAAAATGTCAGGC
TGCTGGTGGCTATATGATCGTATGTGAGTAATGGAGGATATTTATTGGTC
GAATCATCAGCCGGTAACGAAAAATGTCAGGCTGCTGGTGGCTATATGAT
ATTCGCAGGGTTAGTGATGATCATCATGGAATGTGGTTGTTGTATTATGC
AAACCAAGAATAATTGTTGTGATGACTTCGAAAAGAAATTCCCCTTCTGG
GCCAGAGGACTAATTTATCTTTTATTCGCAGGGTTAGTGATGATCATCAT
GGAATGTGGTTGTTGTATTATGCAAACCAAGAATAATTGTTGTGATGACT
TCGAAAAGAAATTCCCCTTCTGGGCCAGAGGACTAATTTATCTTTTATCA
ACAATACCAGCTTTAGCATTATGCTTTGGTACCAAAACTTTGATCACTTC
AATCATTGTTATAACACTAGCCTTGATTTATATCTTCTTAACGTGTTTAG
TTAGATCAACAATACCAGCTTTAGCATTATGCTTTGGTACCAAAACTTTG
ATCACTTCAATCATTGTTATAACACTAGCCTTGATTTATATCTTCTTAAC
GTGTTTAGTTAGGAGTAAGCGTTACGAACGTTTACGTGGAGCAGCACGTG
CTCGTTACGAGGGAGCTAAAAAAGACAGTAGTTTGACTTACAGTGCTATG
AGTGGTGTAAATGCTACAGTTAATTATATGAAAATGAACTCTCCCAAACA
TGGGAAACATGGTAGAGGACGGTCTGGAGGTGGTGGTCGATCCTCAGGTG
GAAGGTCAAAAAAACCTAGGACTCATTCAGCACACACGTGAGAGTAAGCG
TTACGAACGTTTACGTGGAGCAGCACGTGCTCGTTACGAGGGAGCTAAAA
AAGACAGTAGTTTGACTTACAGTGCTATGAGTGGTGTAAATGCTACAGTT
AATTATATGAAAATGAACTCTCCCAAACATGGGAAACATGGTAGAGGACG
GTCTGGAGGTGGTGGTCGATCCTCAGGTGGAAGGTCAAAAAAACCTAGGA
CTCATTCAGCACACACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000178_pilon | genome | sc0000178_pilon:12504..16838 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 508-735:229 |
| Aaloc | 400-504:1292 |
| Aaloc | 277-396:1738 |
| Aaloc | 196-273:2461 |
| Aaloc | 1-192:4336 |
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