XLOC_037017 (mRNA) -

Overview
NameXLOC_037017
Unique NameXLOC_037017
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000035_pilon:1962862..1964445-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037017 ID=XLOC_037017|Name=XLOC_037017|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1584bp|location=Sequence derived from alignment at sc0000035_pilon:1962862..1964445- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGCCTTTGCTAAAATCTTTTTTTATCTCATCATTTTAGGCTCACA AACCGTCAATATGAGGACAATGTTCATGAATTTCAAAATCTGCAAATTTT TTTGTGCAATATTTTCAAAGTTATTATGTTTCATAAAAAAGAAGAAAAAA TCACGCGACGAGGCTTCATATTCGGCAACAACACCTCTATCCACCATTCA GATCCAAGGCTCAGGAGTGAGTATAATAGTGATGAATTCCTTCTTTCTTA GCATGCCCTAATCTTAAAGAATGCTGATCCCTAAAGGTTTTCTTGGCTTT CTACCATGGAAAGAGTCTTTTGATTACCTATCCCCCAAACATCATACTAA AATGGAAAATGAAATTTAAAGTACAAGAATACTAATAGTACACAATTCTG ACTATAAAAGGAAGTCTTCACACAACACCCTTCTTTATGAGGGATTCCTT TTCTTACTATTTTCCTGATGGAAATTTCGAATCAACCCAACACAGCAGGT TAATTTTTAAAAACCGTCAAAAAAGAATTTCTGATGGGGTTTTGAGAGCA GATGTAATTTTTTGCAGTTTTTCAGAGCAGCTGAAATACCTAGAGAAATT AAAATTCATACAAACTTACTTTTACATGCCATTTGATAGAAAAATAATAT ATGAAAATGTTTTCATTGTAGAAAACTACAGATATCGATTTGGTGGATTG GAATAATTGGGGAGAAGATGCCTCAAAAAATGAAGAAAATCAAGAAGAGT CAGAAATATCAGCCGTCGAATTATTCAAAGATATGGAACCCACCATAGCC AAAGCGAAAGTGGTAATGTTAATGTTAATGTATCTTCTTTAGTCAAATGT GTACAAATTTAGAATTTCTCTTTGGATCAAAAAGCTAAAAAAAGAATACT CCTAAATTGAAAATTTTAATCATTTTATTCTTTTGAAATAGGTTCATGTG AAGCAAACGATTCGTAAACCCACTACACCAACAAAACAGAAATCTCCTTC GTCACCTTTTGCGTTTCAATCGAAATTCTCGGATAGTCGAAAATCAAGAT ATACACCTAAATATCAAGTTGAGGTACATTCTTAAGAAATTTTATTGTTA TCTTTCAAAAAAAAAGTTAACTTATTAACGCGAAAGGTTTTTACCTTGGC TCAAATTTTGTTCAACGCTTGGTATTAATAACGAGAGGTGTATCCAATTC GCGTTAATTACTTAAGTTGCTATATAAGTATAATAAGGTAAGCTTTTGAA GACAAAGAGAGTGAGAGAGAGAGTAAAAAGAGCTTATTTGCCGGCCAATT TGAAACGAATGTTTTAGGACTTTACCTACCAATGTGTGATAAGTTTTCTG TCATTTCGTTTGCAGGCGGAGCTTGGTACGATGGACGACGGAGATGAAGG GGGTTGGGATGAGCAATTAGATGATCTGGACATCAATCAAGAAACTGAAA ATATGCTCAAACAAAATAAACAATTAGAACGTCAAAAGCGAGCTGAAGAA CAGCGTAGAAAGAAATTAGAACGTGATCAACATAGACTTAATCGTGGTAA AAATGAAACAAGTTTTGGAGTCAAGGTTACGTAA

Coding sequence (CDS) from alignment at sc0000035_pilon:1962862..1964445-

>XLOC_037017 ID=XLOC_037017|Name=XLOC_037017|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1416bp|location=Sequence derived from alignment at sc0000035_pilon:1962862..1964445- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGCCTTTGCTAAAATCTTTTTTTATCTCATCATTTTAGGCTCACA
AACCGTCAATATGAGGACAATGTTCATGAATTTCAAAATCTGCAAATTTT
TTTGTGCAATATTTTCAAAGTTATTATGTTTCATAAAAAAGAAGAAAAAA
TCACGCGACGAGGCTTCATATTCGGCAACAACACCTCTATCCACCATTCA
GATCCAAGGCTCAGGAATGAATGCCTTTGCTAAAATCTTTTTTTATCTCA
TCATTTTAGGCTCACAAACCGTCAATATGAGGACAATGTTCATGAATTTC
AAAATCTGCAAATTTTTTTGTGCAATATTTTCAAAGTTATTATGTTTCAT
AAAAAAGAAGAAAAAATCACGCGACGAGGCTTCATATTCGGCAACAACAC
CTCTATCCACCATTCAGATCCAAGGCTCAGGAAAAACTACAGATATCGAT
TTGGTGGATTGGAATAATTGGGGAGAAGATGCCTCAAAAAATGAAGAAAA
TCAAGAAGAGTCAGAAATATCAGCCGTCGAATTATTCAAAGATATGGAAC
CCACCATAGCCAAAGCGAAAGTGAAAACTACAGATATCGATTTGGTGGAT
TGGAATAATTGGGGAGAAGATGCCTCAAAAAATGAAGAAAATCAAGAAGA
GTCAGAAATATCAGCCGTCGAATTATTCAAAGATATGGAACCCACCATAG
CCAAAGCGAAAGTGGTTCATGTGAAGCAAACGATTCGTAAACCCACTACA
CCAACAAAACAGAAATCTCCTTCGTCACCTTTTGCGTTTCAATCGAAATT
CTCGGATAGTCGAAAATCAAGATATACACCTAAATATCAAGTTGAGGTTC
ATGTGAAGCAAACGATTCGTAAACCCACTACACCAACAAAACAGAAATCT
CCTTCGTCACCTTTTGCGTTTCAATCGAAATTCTCGGATAGTCGAAAATC
AAGATATACACCTAAATATCAAGTTGAGGCGGAGCTTGGTACGATGGACG
ACGGAGATGAAGGGGGTTGGGATGAGCAATTAGATGATCTGGACATCAAT
CAAGAAACTGAAAATATGCTCAAACAAAATAAACAATTAGAACGTCAAAA
GCGAGCTGAAGAACAGCGTAGAAAGAAATTAGAACGTGATCAACATAGAC
TTAATCGTGGTAAAAATGAAACAAGTTTTGGAGTCAAGGTTACGTAAGCG
GAGCTTGGTACGATGGACGACGGAGATGAAGGGGGTTGGGATGAGCAATT
AGATGATCTGGACATCAATCAAGAAACTGAAAATATGCTCAAACAAAATA
AACAATTAGAACGTCAAAAGCGAGCTGAAGAACAGCGTAGAAAGAAATTA
GAACGTGATCAACATAGACTTAATCGTGGTAAAAATGAAACAAGTTTTGG
AGTCAAGGTTACGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037017XLOC_037017-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000035_pilongenomesc0000035_pilon:1962862..1964445 -
Properties
Property NameValue
Aaloc490-708:220
Aaloc358-489:644
Aaloc217-357:914
Aaloc1-216:1585