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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000077_pilon:1451417..1454831+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037003 ID=XLOC_037003|Name=XLOC_037003|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3415bp|location=Sequence derived from alignment at sc0000077_pilon:1451417..1454831+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGATTTGGAGGAAAGTTGCATTTCAATGTTTGGTGTGCGGAATGATAtc
tcacaaaagatgtttacaAAATGTTCAAGCCAACACATATTGTACTAGGT
AAAGCTTTTGATTAAAGGTTTCTGGTCACGTGCAAGCGATGAAATTTTCG
tttatgaactttaaaatgATGCTCATATAGACTATATGgggtaaaaagac
aaaaatttaaCCAGTGAGtttttttGCCTACTGAGTGGTGAAACCAATCG
ATGCACATGGTAAGGATGGAAATTCTACATTTCTTTCAGCAAAGGGGTTC
GTGCAAAGCTACCGAAATGGCAATTAGAGAAAACAGCGTCAAATGAATCT
ACATCCACCAGTAAACCAATCGACCAGTCTCCCGAAGACAGCCCCGATCC
CTCGAACCGTCTTTCTACACAACTGACTGTTCCGGATGAAACCGATCTGA
GGCCGGGCATAAAAAACAACGGGAGCGCTTCGCCCAACGTTCTGAGACGT
CGTCACAAGACATCGCAAGAGAAACCGCCGTCGCTTAGCAACCACAAGCG
AACTGTCAGTTTACAAGATATGATACAAGAAGATAACTCGTGTCAAAATA
TCCCAGAGGtcagttttcattttctctctCCATATCCTGTCTGTGCCCAC
CAAGCGTAAAGGTCATGGCTTCTAGTCTTCCTCTATGTTATTAAACGTGT
AGGATCAATTATACGCGTAATGTagagaaaacaaaattaaaataatttaa
agctGTATTACGGAAATCTTAAATTAAGCGACTTTTTGATAACGTTATAA
ATTTGATCAACGTTTATTTAGGATACCATTTTCAGTACTTTTCTGTTCAT
GATCATCCGCTCGACCTATTGCTCTGGTGGAGGTGAGGTGGGGCCTAGCA
TGGCGGTATCTTTCTTGTGTGTACCTCGTAAATTATCAAATGTTTCCCCG
CAAAATGATATTTCCTTCCGCCAATTAATGatgttgtaaaaaaaaaatcc
gtgAGGTCAATTGATTAAAACCAAGATCTTGTGTAATAAAAAAGGTAGAT
CAGCTCATTTAAgatatcacaaaaaaaatcatctccaaaaaaatgttttc
cccCCGATGTAGTTTTAAGTGCTGGTTTCCCGTCAGCCTTCGGTCAggat
aaaaaagcaaaaactaACCGTCAAAGTTGCAGTAAACATGACCTACACAA
ACTCTCTACACCCTCTACCTTCTAATTGACAAAACAGAATCTCTCTTTTC
TTTATCAGGACGTAGATGAAGGCGATTTGAATGATTCCATCGCAACTGCG
GCCGTCACCGCTAAAGAAGTTGGTCACCTTGTCACCAGCATTTTGTTGAA
ATCAAGATCTTTTGTAGAATGTTCCAAATAACTTAATGTCACGTTTCTTT
CTCGTCACTTTGAGCTTACTAAATATTAGATGCACGAAATCTTTCTTTCT
CGCAATTCATTTATTGTAACTGTACGCTAGGTTGCGAGCTATGAActttg
gataatttttttgataaaaggaTTATGTTGCAATTGATATCCGCCATGAT
TATCTTTTAACGGGTCTTTGGTTCGCTAAAACAAACTTTCTTTACCTGGC
AATCATTTACACTAATTGTTATCCAAAGCAAAACCAATATGTATCTCGTG
CGACGTTAATTACTTTTCAACGGTCCTTAATTACCTGGAAATATCCTGCA
AATAAAGTCAGGAAATAATTAATTGTGAAGCGTGTCATTATTTGGCTTGT
CAAAGCAGTAAGAGTTATTTGGATCACAGTCAAGtttttttGGTTTATTG
AGCGTGGGTGAAACTAATTATTGGTATTTTTGATTCACTTGTAGGCTGGA
CGAGAGCTCTATGCAAGTTTGGATGTTGATAGTCGAGAGGAAAATATACA
ATCCAAGGTAGATTTCACGCAGCTTCTTCTACACTGCCACTTATAACAAT
GTTCAATAGACTACTTTTAAAAGACTTTCCTTGGATATTCGATTAGACAT
TAAAGCTTTCAATTGATAGCTTTGGCTCGAATTCTAGGGATTTCCGAACG
GCACTCTATGGCCACAACTTCAATCCAAATGCATAAGAAAGGTGATTATT
TCAATAAATCTTTTTCCAAAGTGTTTCTAATGTTGACTTTCCAGGTTCAA
CGGCTGCAACGAGAAATCACAcaagaaaaagaacaacaaatgcAACTACG
ATATTCATTTGAAAGAGTGGAAGAAATTGAAGCCAAGCAAAAATTCACCC
TTCTTATTGTAAGCAAACTTCTTCTCATTTCTTTCTCAAACTTTTCGTCA
ATATCTGGAATGAAATGTCTTTTCGTCTCTTTTTCGATAGTCTCTTGTTC
GATCCCGAGTGTAGCAATACCCTTGTTTCGGCCCCTTTCTCACTGAATTG
CCAAGTATTATGACGAAATCTCTCTTCTGAATGTTTCTATCCACCCCACC
GCACCGCACCACATTCCTTCACCAAATTATTTGGTTTCTCAAGTCAAACC
TTGATTCGTTCCAGTGACCtcactttttcgaaagtttaaaTCCGAGAATT
GTTTAGAATCGTTTTAATCGTTTCGTAACGAAATATTTGTACAAGATTTt
cgtacctctttttgcctaagcCCACTGTTTAAACAATATAACCTGTTATT
TAACAAATGAACATAAATTGAACGAATCGTTTTTGATAATTATCCGAGGG
AATCCTGTTGAAAAAACGTTTATTCCTCTGACTTCGAAGACGTTGTATTG
ACTTGTATAGTGATTAATCTTAATTTGCATTTAACGACTTCCTGTACATG
TCATGTTATTACATCAGCACGTTTTGACATTTCATTAGCAGCTCTTACCA
CATCTCGAAAAGTCTTATTCCGAGCTAAGAACTTTTGTTGCGAGAGAAAC
TTCTTGCTCATATGAAATTTGACGAAACCCATTAATAATTTCTctagtaa
attttgaaaaacccgCCATATTGAAAAATGCTCAACCTTAGAAAAATGTC
ACTCTGGCTTAAAATGATCCTAAGGGTCCAAACTATCAATTCCAGCAATA
AAATGTAGTTCATACTCAATGTATAGGTTGACCTGGTTCAGCCCCTGACT
AAATGGCCACCTGTTACTATCTCGTTTTTCTTTAGGCTGATTTCTATAGT
ACCATTTTGTGTGTTGAACGTAAACGAACTTCAAGTAGTAATAGTGTGGG
ATAATCTAGCTAGACAGGATGAGAAGAACTTGACGATGTGAAGttggttt
tcctttttttgatatttgaatTCTTTTCCTGTGATAATTCTATGATTTGT
GTTGTAGAGGAAATCAGAGGAGAGAAGTCAAGCGTTGGCGCTGTTAATGA
TCCAATATTGTGCTGCTTTGAACGAATGTCTTTCTAATGGCGAACCGAAG
CAAGTCGACCTCTGA Coding sequence (CDS) from alignment at sc0000077_pilon:1451417..1454831+ >XLOC_037003 ID=XLOC_037003|Name=XLOC_037003|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1524bp|location=Sequence derived from alignment at sc0000077_pilon:1451417..1454831+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGATTTGGAGGAAAGTTGCATTTCAATGTTTGGTGTGCGGAATGATAtc
tcacaaaagatgtttacaAAATGTTCAAGCCAACACATATTGTACTAGCA
GATTTGGAGGAAAGTTGCATTTCAATGTTTGGTGTGCGGAATGATAtctc
acaaaagatgtttacaAAATGTTCAAGCCAACACATATTGTACTAGCAAA
GGGGTTCGTGCAAAGCTACCGAAATGGCAATTAGAGAAAACAGCGTCAAA
TGAATCTACATCCACCAGTAAACCAATCGACCAGTCTCCCGAAGACAGCC
CCGATCCCTCGAACCGTCTTTCTACACAACTGACTGTTCCGGATGAAACC
GATCTGAGGCCGGGCATAAAAAACAACGGGAGCGCTTCGCCCAACGTTCT
GAGACGTCGTCACAAGACATCGCAAGAGAAACCGCCGTCGCTTAGCAACC
ACAAGCGAACTGTCAGTTTACAAGATATGATACAAGAAGATAACTCGTGT
CAAAATATCCCAGAGCAAAGGGGTTCGTGCAAAGCTACCGAAATGGCAAT
TAGAGAAAACAGCGTCAAATGAATCTACATCCACCAGTAAACCAATCGAC
CAGTCTCCCGAAGACAGCCCCGATCCCTCGAACCGTCTTTCTACACAACT
GACTGTTCCGGATGAAACCGATCTGAGGCCGGGCATAAAAAACAACGGGA
GCGCTTCGCCCAACGTTCTGAGACGTCGTCACAAGACATCGCAAGAGAAA
CCGCCGTCGCTTAGCAACCACAAGCGAACTGTCAGTTTACAAGATATGAT
ACAAGAAGATAACTCGTGTCAAAATATCCCAGAGGACGTAGATGAAGGCG
ATTTGAATGATTCCATCGCAACTGCGGCCGTCACCGCTAAAGAAGACGTA
GATGAAGGCGATTTGAATGATTCCATCGCAACTGCGGCCGTCACCGCTAA
AGAAGCTGGACGAGAGCTCTATGCAAGTTTGGATGTTGATAGTCGAGAGG
AAAATATACAATCCAAGGCTGGACGAGAGCTCTATGCAAGTTTGGATGTT
GATAGTCGAGAGGAAAATATACAATCCAAGGTTCAACGGCTGCAACGAGA
AATCACAcaagaaaaagaacaacaaatgcAACTACGATATTCATTTGAAA
GAGTGGAAGAAATTGAAGCCAAGCAAAAATTCACCCTTCTTATTGTTCAA
CGGCTGCAACGAGAAATCACAcaagaaaaagaacaacaaatgcAACTACG
ATATTCATTTGAAAGAGTGGAAGAAATTGAAGCCAAGCAAAAATTCACCC
TTCTTATTAGGAAATCAGAGGAGAGAAGTCAAGCGTTGGCGCTGTTAATG
ATCCAATATTGTGCTGCTTTGAACGAATGTCTTTCTAATGGCGAACCGAA
GCAAGTCGACCTCTGAAGGAAATCAGAGGAGAGAAGTCAAGCGTTGGCGC
TGTTAATGATCCAATATTGTGCTGCTTTGAACGAATGTCTTTCTAATGGC
GAACCGAAGCAAGTCGACCTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000077_pilon | genome | sc0000077_pilon:1451417..1454831 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 655-762:3308 |
| Aaloc | 541-654:2145 |
| Aaloc | 478-540:1845 |
| Aaloc | 418-477:1259 |
| Aaloc | 100-417:291 |
| Aaloc | 1-96:1 |
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