XLOC_036985 (mRNA) -

Overview
NameXLOC_036985
Unique NameXLOC_036985
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000077_pilon:1339554..1341292-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036985 ID=XLOC_036985|Name=XLOC_036985|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1739bp|location=Sequence derived from alignment at sc0000077_pilon:1339554..1341292- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGACCGATCAATTCGGTATGATTGGTCTACTCACATTCATACGAGC TGCTGAAACTGAACCAAACCTCGTCACACTTGCACTCGGAAGGTATTTGA TTACTACTATTTCTTGTAAACCACGTATTTGAACAGAAAAAAAAGAGACT TTTATCAGCAAGTGAACTTTAAATGTTTTGAAGGTTGAAGTACTATGCGG TTCGTATAATTTAGACGACCGATTTTTTTTCACTTATGGAAGTATATTTC ACATACCTATTGGCCGTTATTTTCCGACTTTTTGCCTTTTAATGTAAAAC TATTAAAAAAAAACAGAAAGTTGACAGTTCGAATGTCTAAACTAAAGCTC TTTAGAACTAAGATGATAATAGATTGCTAACTTTTTGTCTTGTTTTCTAT TCCTAGTGACCTGACAACACTTGGATTGAATTTGAACTCGACAGAGTAAG CATTTCTTGTGTTTATAAATACAGTCTACCTGTGCTCCAGTTGCTTGCTC CAGAGCTAGATCCTACCATACTACATCCATACCCTGTTGTTTTAAAATTA GTCGAATCGATTTTTGAGATTAACAGATTCATGACTTGTATTTTGTGTTT CCTGCTATAATGGAAATTCCGTAATCATGCTCACTTCAACATCTTTTTTT CAGGAGTTTATATCACACATTTGGCTCACCCTTCTCTGACTCTACTTGTA AACCTCATGAAATAGGTAAGTTTGCAACAAATCCACTGATCAATGAATCA AAAAATGGTACATAGACATTTTAATGGAAAATATTGACGATTAGATGATC CTGTCTCGATATTTAATCAAGAGATTATGTATCGGAGGATATCAGGATAT CGAGGGTGACCGTTATTTAAGTTAAGTTTTTACCGTCGTCGGGGAAAGTG GACGGTGATTGTGGCGACATGTCAACTTTGCTTTATACCGTCTCCTTCGA TCTACCTTAAATATATAAACTCGCTAATAAAGCATTTTCGACTTTCTCAA ACTGTATTGTAAAACCAACTTTTCTACTTTCAGATTTTTATGCGCCACCA GAGTACCTTATAAGTTCATATATCCGTGACAAATTAGCACCGATCAAATT AGGACGTTATGGGGAAGACTTATTATTTTATTTGTATTATACGAATTGTG GAGATATTTTACAACTAGCTGCAGCCGCTGAACTGTAAGTTTGTCTCCCA ACATAACAAACAAGTCCATACGCCATAAAACGTTTCCTCGCCGTTAAAAT ATTCCTGATGCGTTCCTTGAACCTTACTGCTGCTTTTTGGAATTTGACTA AAGCTAGTGATTTCTTGTACGCGGAAGTGATTTTTTAGGATTTTTCTCTT AAGAAACCCCATTAAGATAGATTCTAACGAGACAATTTTCGATTACTTTC TTTGTATTATTGTTTTTCTGACCTTTGATTTATGTTCTTGTATTTGTTCG TCGAATACCGTTCTTTTTAACGGTTTTAGTTTAGTAAAACTTTTGTTTAT CTTTCAGATATGCACGAGATTGGCGCTATCATAAAGACGAACGTGTATGG ATTACGCGTTTCCCTGGAATGGACCCTCAAGTAAAGATGAGTACTTATGA ACGTGGGACATATTATTACTTCGACCCTCAAGGCTGGCGAAAAGTCGCCA AGGAATTCCACGTAGAGTACGAACGCTTAGAAGAAAAACCCACCGTGCAA GCACTTCAACAACAAGCGGCCGCCCAGCAGCAACATTAG

Coding sequence (CDS) from alignment at sc0000077_pilon:1339554..1341292-

>XLOC_036985 ID=XLOC_036985|Name=XLOC_036985|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1152bp|location=Sequence derived from alignment at sc0000077_pilon:1339554..1341292- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGACCGATCAATTCGGTATGATTGGTCTACTCACATTCATACGAGC
TGCTGAAACTGAACCAAACCTCGTCACACTTGCACTCGGAAGATGGTGAC
CGATCAATTCGGTATGATTGGTCTACTCACATTCATACGAGCTGCTGAAA
CTGAACCAAACCTCGTCACACTTGCACTCGGAAGTGACCTGACAACACTT
GGATTGAATTTGAACTCGACAGATGACCTGACAACACTTGGATTGAATTT
GAACTCGACAGAGAGTTTATATCACACATTTGGCTCACCCTTCTCTGACT
CTACTTGTAAACCTCATGAAATAGGAGTTTATATCACACATTTGGCTCAC
CCTTCTCTGACTCTACTTGTAAACCTCATGAAATAGATTTTTATGCGCCA
CCAGAGTACCTTATAAGTTCATATATCCGTGACAAATTAGCACCGATCAA
ATTAGGACGTTATGGGGAAGACTTATTATTTTATTTGTATTATACGAATT
GTGGAGATATTTTACAACTAGCTGCAGCCGCTGAACTATTTTTATGCGCC
ACCAGAGTACCTTATAAGTTCATATATCCGTGACAAATTAGCACCGATCA
AATTAGGACGTTATGGGGAAGACTTATTATTTTATTTGTATTATACGAAT
TGTGGAGATATTTTACAACTAGCTGCAGCCGCTGAACTATATGCACGAGA
TTGGCGCTATCATAAAGACGAACGTGTATGGATTACGCGTTTCCCTGGAA
TGGACCCTCAAGTAAAGATGAGTACTTATGAACGTGGGACATATTATTAC
TTCGACCCTCAAGGCTGGCGAAAAGTCGCCAAGGAATTCCACGTAGAGTA
CGAACGCTTAGAAGAAAAACCCACCGTGCAAGCACTTCAACAACAAGCGG
CCGCCCAGCAGCAACATTAGATATGCACGAGATTGGCGCTATCATAAAGA
CGAACGTGTATGGATTACGCGTTTCCCTGGAATGGACCCTCAAGTAAAGA
TGAGTACTTATGAACGTGGGACATATTATTACTTCGACCCTCAAGGCTGG
CGAAAAGTCGCCAAGGAATTCCACGTAGAGTACGAACGCTTAGAAGAAAA
ACCCACCGTGCAAGCACTTCAACAACAAGCGGCCGCCCAGCAGCAACATT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_036985XLOC_036985-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077_pilongenomesc0000077_pilon:1339554..1341292 -
Properties
Property NameValue
Aaloc346-576:232
Aaloc196-342:705
Aaloc133-192:1086
Aaloc94-129:1333
Aaloc1-90:1740