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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000077_pilon:1343194..1345642- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036984 ID=XLOC_036984|Name=XLOC_036984|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2449bp|location=Sequence derived from alignment at sc0000077_pilon:1343194..1345642- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTGAGCCGTGGGGGTTTTGAAAATCAGTTCCCTGGAATCAACCC
GTAAGTGTGCTAATTTCATTTTAGGTTTTATTTAAAATGATATCTTTCAT
ATCAAATAAGTAAGAATCACGCTTAGGGCTTAAGCTAATTTGTCCTTATC
GGTCTTTTTTATTGCTTTCTTAGTGGGGTATTTTCTTTTTCACTCTTTAA
AATATTTAGACAAGATTTTTTTGATGCCATTATTCTATTGGACTTCTTTA
AAAAGAGTGATTTCTTTCAATACTTAAAAAAACAGCTCAACATAACAGTT
TGCAAATGGATTTGGACAATTTCCAGTCTTATAACAAAATTCTTGAACAT
GGTAGAAAATATGGATTATCTGTTTTTATTCTTTTTAGTTACTCAGCTGG
TCGCAAACCCCAAGATGTTTCACCAGGTATTTACTGATTCATTTCTCATT
CAGACCATCTATTATATACCTATTTATACTCAAACCGTTCTCTATTATCA
GTCCTTTCTATACTATTTCCTTACATTGATAAATTATTTGTTATAATTCC
TGTTTCAGGAGGAAGCAGTCGAAACCCAATAGGATCAGGTTTCTCAAATA
ACACAGAAGGAAGCAAGATGGGATTCTTTGGTGGTATGAAAAAAGATGGA
GAATCTGCTGACTCAGCAGATTTTTTCTATGGTGGTAACAAGACAAGCCT
TTTACAGCGCAGCCAATCTGCCTCAGATGGAGGAGTAAGTTTTATTTACA
GGCGCAGTAGTGTAGTACTGGTTATCAATCTTGGCTGCCGTCTAGGAGTT
CAGTGTTTAATTCCCACTTGTGCTATGATTCACTTGGCAAGTGAATTTAC
CAATAATGTTTGTTGTATCTTAGTCAAACATTTGTCATTCTTTGAACAAC
ACATAATGTATGTCAGCTATAGCGATCATTTTATGGAATGTGTCCACTTT
AAATTTATAAATGATTTTTTTCACGTTTAGCTCTCAAGTCACATGAATAA
TTTGAACTTGTATGGAAGCAATAACAGTCTAAACTCTATGAATTCAGGTA
TATTTCGTCACTACAACTATGAATATGTATTAACTGCAGTTTGCTACTTA
TCTTGTTGAGTATTGTTTATCATTTATTGAACATCACACCAGATTCACAA
CAAATATTCCGACAGTACAACTGTTCTGTACCACTGAAAAAAAGGTGCAA
AACTGCTTACAGTTCATGATATTTCAGGATTTAAAGGCAAAGAAAATGAT
ACAAGTTCTTCAAATTGGAGCTCAGGTGGATGGGGACAATCAGGTTCCGG
TTCAGGTAAAACACATTTTATTTTTTAAGGAAATATTTTTCGATTTGAAA
ACTTACAACTTTTGCTTTAATAGTTGCAATAGTTTATTTTTCAAATTCGG
GCAGATAAACTTACTTTATTTTCAGTTAACTTTTCAGTTTTAATGATATC
CAATATCTACAATTTTAGGCTCGTTACCTTTTCCGCAAGGAGGTCTGGGT
AGCACCAATCTTACCAACCCAACATCACGACCAAGCTTAAATAGCAATTC
TCTACTACAGGTATTGATATGACTTCCTCATAAGTTTGTCCTTCTCTAAT
TGTTTTTAAACCTCTTTTCTATTTCTTGAATTGTGTTTTATTTATTTTTT
CTTAATGGTTTACGATTAATTAATGCCTTTTTATGTGTTTAAATGCATCT
AATTGAACTACGATCATTATCATTTTAAACAATATTATAGTAATGAACCT
TCATAACATGCTAACCTCTAACTTCCTACCATTTTGGCTTTCCCCTTTGA
TAACCTCTCAAATATGTTGAGACAACTTTTGTTATGAAATGTCTTGTTTC
AGTTTTCTCGGAGCTTTTCTTTACAAACTGGGACGACATCACAATCTTCT
TCAGACATGCAATACCAACAACAATTGAAACTACTAGGCTCAGGACAGTC
GTCTCCGTAAGTATGACTTCCATTCCTCTCACCTTCTCTTCAATTTAAAC
CTGCTCAGAGCTTTCTGCTCTATCTTTAAAATTTTCTAAAGACTTACCTA
TATTTGGATGAAAGGAATTAAGTTTGTCCGAGCTATCTCAACAAAGAAAA
GTGGGTGTAACCTTTCATATTCAAAAACTAATATTCTAGGAACAACAGTG
GTTTATTATCAACGCAACAACAACAGCATATGCAGCAATCACAACAACAA
CAAGCTTTCTCACAGAGGAATCCTATCGGCCAAATGCCAAACATCTCAAT
GCAAGGACATTCTTCACCAAGCCACTCACCGATACCTTCCATCGGTAGTG
GCGTATCTTCAAACAATAATAAAATATTACCACCTTCAAGGTCACTATCG
TCATCTGGTATGTTACCGACCTCATCGACTGCCCTTTCGAATCCAGGAAA
TTATCATGGCTTCATTGGAAACCAGTTGAGTAGAAACGTTGCTGGACCA Coding sequence (CDS) from alignment at sc0000077_pilon:1343194..1345642- >XLOC_036984 ID=XLOC_036984|Name=XLOC_036984|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000077_pilon:1343194..1345642- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTGAGCCGTGGGGGTTTTGAAAATCAGTTCCCTGGAATCAACCC
ATGGCATTGAGCCGTGGGGGTTTTGAAAATCAGTTCCCTGGAATCAACCC
TTACTCAGCTGGTCGCAAACCCCAAGATGTTTCACCAGTTACTCAGCTGG
TCGCAAACCCCAAGATGTTTCACCAGGAGGAAGCAGTCGAAACCCAATAG
GATCAGGTTTCTCAAATAACACAGAAGGAAGCAAGATGGGATTCTTTGGT
GGTATGAAAAAAGATGGAGAATCTGCTGACTCAGCAGATTTTTTCTATGG
TGGTAACAAGACAAGCCTTTTACAGCGCAGCCAATCTGCCTCAGATGGAG
GAGAGGAAGCAGTCGAAACCCAATAGGATCAGGTTTCTCAAATAACACAG
AAGGAAGCAAGATGGGATTCTTTGGTGGTATGAAAAAAGATGGAGAATCT
GCTGACTCAGCAGATTTTTTCTATGGTGGTAACAAGACAAGCCTTTTACA
GCGCAGCCAATCTGCCTCAGATGGAGGACTCTCAAGTCACATGAATAATT
TGAACTTGTATGGAAGCAATAACAGTCTAAACTCTATGAATTCAGCTCTC
AAGTCACATGAATAATTTGAACTTGTATGGAAGCAATAACAGTCTAAACT
CTATGAATTCAGGATTTAAAGGCAAAGAAAATGATACAAGTTCTTCAAAT
TGGAGCTCAGGTGGATGGGGACAATCAGGTTCCGGTTCAGGATTTAAAGG
CAAAGAAAATGATACAAGTTCTTCAAATTGGAGCTCAGGTGGATGGGGAC
AATCAGGTTCCGGTTCAGGCTCGTTACCTTTTCCGCAAGGAGGTCTGGGT
AGCACCAATCTTACCAACCCAACATCACGACCAAGCTTAAATAGCAATTC
TCTACTACAGGCTCGTTACCTTTTCCGCAAGGAGGTCTGGGTAGCACCAA
TCTTACCAACCCAACATCACGACCAAGCTTAAATAGCAATTCTCTACTAC
AGTTTTCTCGGAGCTTTTCTTTACAAACTGGGACGACATCACAATCTTCT
TCAGACATGCAATACCAACAACAATTGAAACTACTAGGCTCAGGACAGTC
GTCTCCTTTTCTCGGAGCTTTTCTTTACAAACTGGGACGACATCACAATC
TTCTTCAGACATGCAATACCAACAACAATTGAAACTACTAGGCTCAGGAC
AGTCGTCTCCGAACAACAGTGGTTTATTATCAACGCAACAACAACAGCAT
ATGCAGCAATCACAACAACAACAAGCTTTCTCACAGAGGAATCCTATCGG
CCAAATGCCAAACATCTCAATGCAAGGACATTCTTCACCAAGCCACTCAC
CGATACCTTCCATCGGTAGTGGCGTATCTTCAAACAATAATAAAATATTA
CCACCTTCAAGGTCACTATCGTCATCTGGTATGTTACCGACCTCATCGAC
TGCCCTTTCGAATCCAGGAAATTATCATGGCTTCATTGGAAACCAGTTGA
GTAGAAACGTTGCTGGACCAGAACAACAGTGGTTTATTATCAACGCAACA
ACAACAGCATATGCAGCAATCACAACAACAACAAGCTTTCTCACAGAGGA
ATCCTATCGGCCAAATGCCAAACATCTCAATGCAAGGACATTCTTCACCA
AGCCACTCACCGATACCTTCCATCGGTAGTGGCGTATCTTCAAACAATAA
TAAAATATTACCACCTTCAAGGTCACTATCGTCATCTGGTATGTTACCGA
CCTCATCGACTGCCCTTTCGAATCCAGGAAATTATCATGGCTTCATTGGA
AACCAGTTGAGTAGAAACGTTGCTGGACCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000077_pilon | genome | sc0000077_pilon:1343194..1345642 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 607-915:310 |
| Aaloc | 502-603:598 |
| Aaloc | 412-501:980 |
| Aaloc | 334-408:1221 |
| Aaloc | 265-330:1470 |
| Aaloc | 91-264:1890 |
| Aaloc | 52-87:2061 |
| Aaloc | 1-48:2450 |
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