|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000295_pilon:37806..41245- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036980 ID=XLOC_036980|Name=XLOC_036980|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3440bp|location=Sequence derived from alignment at sc0000295_pilon:37806..41245- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGTATCGAACTTTAGAAGCCATAGCATTGATAAGTATTTTGTCGAT
CTGTAACAGCCAAACAATACCAACAATTGCAGAGCGAAATGCAGCTGTTC
AGGTTATCAAAGATATCATTAATAGTCACAAGGAGCCGATAGGGGACGAT
GATCCACCGACGAAGTTTAGACATCCGTTTCGGGCTGGATTTGTACGGCT
AGCGTTTCACGATTGTGTTCACGGCTCAGGATACACGACAAAAGCATGTG
ACGGATGTATCAATCATGCTAACCCAGAAAATGCCGGGTTGAAACGATAT
ACAGATGAACTTGATGCAGCATACGCTGACGTTAGTAATGGTGTAGCTAC
AAGCATGACTAATGCCGACTTCTACACATTAGCAGGTAACTGTTTTTTCT
TTTCAGTCGACGATCTAATGAAAATGAAAAACTTTATCAATAAATTCCAG
ACATTGAGTATAAATTTAATGAATTTAAAAAACTTTTCTGTGTTCTATGT
AGCCGTATCAAACTGTTAACTCTTTGTTACCTTGTTAACGTTTCAATGAA
ATTTTCTACGGAAGGTTTATATGTGTGTTTATGTGCTCGTAAAAATTAAC
TTAAAATATTGTCAACTTCAAGGATAAAATCACGGTAGCTCTTACAGAAG
CAACTACTCTTACTACTATTAGGCGGGGAAGGAAACGTACGGAAATATAA
AACAAGCAAACACTGAAATACACCGTCAATGCTGACAGCAAAAATTGCTA
AAACCCATATTTTCCTTCAAACACCGAACCACTGACGGGAAAAGGGCTAA
TACCGTCACACCGTCACTGAACGATAATCTTGCACAGGAGTTTAATAAAT
ATCACCATGATAACGCTTATAAAATCATTTTTAAAAATCTTGTTTTTATC
TTTAATTTGTATATTTATTTAAATAGGTGTTGTCGCCCTTGACGAGGCGG
CTGAACCAGGTGCAACTATTCCACAACAATTTAACGGATTGGAAATATTG
AAATTTGGTAGAAAAGACCCTGACGATTGCGCAACAGAAGTAGACGACGA
AGACGACTTCTTATCGCCCCATATCGGTCGTTTCCAGGGAAATAATGGTA
TTGAGAAATTTTTCGACCGTAGATTTGGATTCAGTCTCCAAGATTCAGTC
GCTATCTTGGGTGCACATACGTTAGGCAAAGCTCATTTTGAGAATTCAAA
ATTTGAAGGCATGTGGACCACAGCTGTTAATAACAATGGAGCACAATCCG
ATTTTCTCAACAATCGTTATTACAGACATATTGCTGGTGATTGGACCCAA
GTAGCTGCACAAGGTCCAGGAGGTAAACAATCAAATAAGATGTGTTGGAG
TTTTTACAAGATGCTTAACTGATTGGTTATTTTTAAACAATAGGGATGAC
GCGTTCTTTAGAAAAAGTAATAAAATCGTTTGTCTCAACATTTAACGACC
AACAGAGTCATCAAAGAACTTGTAAAAACTCCAGCTTGACCCAATCAAAT
GTAGTTTTATTGGTTATTTATTACCTTTGTATTTTTTGTAGCCTTTCAGT
TTCTCAGCTGTTTCCATATCATATTTTCAAACTGTCTGTTTGCTATTATT
GGGGTCCAAAGCAGTTTGCGTTAAATTTTGTGTGCGAATACGTGAATATT
TTCTTTTTGGTCCCATATTGAGCGTGTCCGTAAAATCATTAATCCTGTAC
CCTGTACCTTAAGTAAAATCATCAAATCATCTCTTTAAAAATTCAAAGAA
ATAAATGATGAAGATCTTTATATAAATTCTGCTTCAATTCTTTCCGGAAG
TCCGTTGCTGCAGTACAGTTCGGCAAATTGCATAGATCCGCAACGTTGCA
ATACCTCGCAACGTTGCGGTTTTTCGCAGTGTTTCCCCAGGGTTGCGCTG
CTATTTTACGCAACGCTTCCAATTGAAGATTATGATTTTAAAAATTATGA
GCGCCTACCAATTTTCTTCTAAACGCATGCAAAATCAGGCAAAAACTTGC
TTTCTTGAACAAAGTAGCGCTTTTTTGAACGAAGTAGCATTTCTTCCAAG
AATGATTGTGAATAATCGCTAGGTAGGAAATTAAAATGCTAGGGTGAAAA
GTTTCCTTTTGGGTTGTTCTTCAAAATGCACATTATTTTGGGACCCCGGT
CCAGGCCCTGCGATGCCGATTTTGGTCCAAAGGTCCATCTTTTATTGTCT
CTTTGAAGCGAGCTTCGTTGCCGCCTGTATTTCAAAATTGGTATGAAAAA
TCCGACAATATTCCATCATAATTTTATTTCTTTGAATTATTTAGGTAAAA
GGATTGATAGAGCTTGAACATTACTCGTATTTCACAAAAACATTATTTTC
GAATTTTTCTACAAGTTTGCAATATATTTTATCAACATTTTTCAACTCTG
AAATGCAGAGTTTTAACTGCGTGTATACTTTTAAATCCCTTTTGTCACTC
CAATAATTTTTTTTATGACTTGAAAAAAATAGCTTGCGAAAGTTGAGAGC
CTATGTCATAAGAATATCAAAATTAGAATGTGACACTCTCTAAAATTATT
CGACACTTTTAAGTCAAAATTTAGAAATATTAGTCGGAATTTTGACAAGC
TGACGATGATTTTGCCTCTGTTATCTTTTGTTATAATATAGATAAAAGAC
TTGAGAAGAGTAGAACAACAGAGACTTTTGTCGAAGCTTTGACGTTGTTA
GCAAGGTATTCCCAAGTGGTATATCATCAAAATCTATTATTTTATTCTAT
ACTTTTAACGAGGCGGCAACGAAGCTAGCACTGTTATCTTCAAAAAGACA
AAGAAGATGGATGTCCAGTCGTTTATATGTTCATGGTGTGAGGAATAAAC
TTGAGATACACTTTAGCCTAGGACAAAGTACTTAAAACAGTGGAGTCTGT
TTAACTCGAATGTCTCCTTTTCTCGTCCCTTCAGTTAACAATGCCTTATA
AACCTTATTCAATAACTCTTAACTCGTACAAATTTGTGCTCCTCGTGCGT
GTTGGAGTTACTGAGACTCAAAACTGTATTCATAATTATCGTTACCCTCA
GGTGCAAGTGGAAACATGCAATGGAAACGTACGAGTGGTGGTGGAATCCG
TTTAATGTTGAATGTTGACATGGCGATTGCTTTCGATTTGCACAATAATA
ATACGGAGAATCCATTTCAGAACGAGCCACAAGGACAGGTCAACACGTGT
GTAATCGATGTCGAAGAGGACGAAGTTGGGAGCAAAAAACCTGGAAACCA
AACATGTGAAGCAGTTGCACCCAACATATGTTGTCCAAGATCAACCACAA
ACGAGGGAGGCGAAGATGAAGAAACGAATTATTTCTTCAGATATGCCACT
AATAATCAAAGATGGATAAGTGAATTCAAAACTGCCTACTTCAAAATGAT
TTTCAACAATGAAGTTGGATTATCAGCAGCTACACCATAA Coding sequence (CDS) from alignment at sc0000295_pilon:37806..41245- >XLOC_036980 ID=XLOC_036980|Name=XLOC_036980|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2340bp|location=Sequence derived from alignment at sc0000295_pilon:37806..41245- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGTATCGAACTTTAGAAGCCATAGCATTGATAAGTATTTTGTCGAT
CTGTAACAGCCAAACAATACCAACAATTGCAGAGCGAAATGCAGCTGTTC
AGGTTATCAAAGATATCATTAATAGTCACAAGGAGCCGATAGGGGACGAT
GATCCACCGACGAAGTTTAGACATCCGTTTCGGGCTGGATTTGTACGGCT
AGCGTTTCACGATTGTGTTCACGGCTCAGGATACACGACAAAAGCATGTG
ACGGATGTATCAATCATGCTAACCCAGAAAATGCCGGGTTGAAACGATAT
ACAGATGAACTTGATGCAGCATACGCTGACGTTAGTAATGGTGTAGCTAC
AAGCATGACTAATGCCGACTTCTACACATTAGCAGATGATGTATCGAACT
TTAGAAGCCATAGCATTGATAAGTATTTTGTCGATCTGTAACAGCCAAAC
AATACCAACAATTGCAGAGCGAAATGCAGCTGTTCAGGTTATCAAAGATA
TCATTAATAGTCACAAGGAGCCGATAGGGGACGATGATCCACCGACGAAG
TTTAGACATCCGTTTCGGGCTGGATTTGTACGGCTAGCGTTTCACGATTG
TGTTCACGGCTCAGGATACACGACAAAAGCATGTGACGGATGTATCAATC
ATGCTAACCCAGAAAATGCCGGGTTGAAACGATATACAGATGAACTTGAT
GCAGCATACGCTGACGTTAGTAATGGTGTAGCTACAAGCATGACTAATGC
CGACTTCTACACATTAGCAGGTGTTGTCGCCCTTGACGAGGCGGCTGAAC
CAGGTGCAACTATTCCACAACAATTTAACGGATTGGAAATATTGAAATTT
GGTAGAAAAGACCCTGACGATTGCGCAACAGAAGTAGACGACGAAGACGA
CTTCTTATCGCCCCATATCGGTCGTTTCCAGGGAAATAATGGTATTGAGA
AATTTTTCGACCGTAGATTTGGATTCAGTCTCCAAGATTCAGTCGCTATC
TTGGGTGCACATACGTTAGGCAAAGCTCATTTTGAGAATTCAAAATTTGA
AGGCATGTGGACCACAGCTGTTAATAACAATGGAGCACAATCCGATTTTC
TCAACAATCGTTATTACAGACATATTGCTGGTGATTGGACCCAAGTAGCT
GCACAAGGTCCAGGAGGTGTTGTCGCCCTTGACGAGGCGGCTGAACCAGG
TGCAACTATTCCACAACAATTTAACGGATTGGAAATATTGAAATTTGGTA
GAAAAGACCCTGACGATTGCGCAACAGAAGTAGACGACGAAGACGACTTC
TTATCGCCCCATATCGGTCGTTTCCAGGGAAATAATGGTATTGAGAAATT
TTTCGACCGTAGATTTGGATTCAGTCTCCAAGATTCAGTCGCTATCTTGG
GTGCACATACGTTAGGCAAAGCTCATTTTGAGAATTCAAAATTTGAAGGC
ATGTGGACCACAGCTGTTAATAACAATGGAGCACAATCCGATTTTCTCAA
CAATCGTTATTACAGACATATTGCTGGTGATTGGACCCAAGTAGCTGCAC
AAGGTCCAGGAGGTGCAAGTGGAAACATGCAATGGAAACGTACGAGTGGT
GGTGGAATCCGTTTAATGTTGAATGTTGACATGGCGATTGCTTTCGATTT
GCACAATAATAATACGGAGAATCCATTTCAGAACGAGCCACAAGGACAGG
TCAACACGTGTGTAATCGATGTCGAAGAGGACGAAGTTGGGAGCAAAAAA
CCTGGAAACCAAACATGTGAAGCAGTTGCACCCAACATATGTTGTCCAAG
ATCAACCACAAACGAGGGAGGCGAAGATGAAGAAACGAATTATTTCTTCA
GATATGCCACTAATAATCAAAGATGGATAAGTGAATTCAAAACTGCCTAC
TTCAAAATGATTTTCAACAATGAAGTTGGATTATCAGCAGCTACACCATA
AGTGCAAGTGGAAACATGCAATGGAAACGTACGAGTGGTGGTGGAATCCG
TTTAATGTTGAATGTTGACATGGCGATTGCTTTCGATTTGCACAATAATA
ATACGGAGAATCCATTTCAGAACGAGCCACAAGGACAGGTCAACACGTGT
GTAATCGATGTCGAAGAGGACGAAGTTGGGAGCAAAAAACCTGGAAACCA
AACATGTGAAGCAGTTGCACCCAACATATGTTGTCCAAGATCAACCACAA
ACGAGGGAGGCGAAGATGAAGAAACGAATTATTTCTTCAGATATGCCACT
AATAATCAAAGATGGATAAGTGAATTCAAAACTGCCTACTTCAAAATGAT
TTTCAACAATGAAGTTGGATTATCAGCAGCTACACCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000295_pilon | genome | sc0000295_pilon:37806..41245 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 784-1170:388 |
| Aaloc | 388-780:2513 |
| Aaloc | 1-384:3441 |
|
