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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000295_pilon:212163..214259+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036975 ID=XLOC_036975|Name=XLOC_036975|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2097bp|location=Sequence derived from alignment at sc0000295_pilon:212163..214259+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAATATTAACTCTGAAAGCTTATACTGTTGTCTTGTAACTTTACT
GTTATTATCACAAGTCACATGTCAAGAGTCTTCTACGCTACGCACATGCT
CTCAAAGACCTACGCCGCCGGAAAACGCTTATATCACGTTTCCGAACACA
CCACGTAATCGAGGATACGGTACCGAAAGATATCAAGAATACGATAAAGT
TTATTTCGCATGTAATATGGGTTACGAATTAGTCAGCCAGTACGCTTATA
ATGTTATGTTTGTCACGTGTGGACACGATGGACGATGGTTCCCGAAAATT
GAACAGTTAGGGAAATGTGTGTCTGTTTTTGAAGTCAAGGAGAACGACAA
CGCCACCACGTTTTGTTGTAAAAAAGGTGGCAAGTGTATCGATAAACGTA
AGAGATGTGATTGCGATGTCGACTGCGAGGATGGGTCAGATGAAAAAGAT
TGCCCACAACGTCAGAAAATCATCAACGCTTCGCGCACCGGCTCCAAATC
TTCCGGTATTATCAGCAGTCCGGGATACCCGCGTTATCAAGATTATCCGG
ACGAATTCAATTGTGTTTACCATATTAACACGGTGCAaggatatcatgtt
caaattgACTTTGAGGAATTCGATCTCCCTAAGAAACGAAATAAGAAGTG
TATGGATTCCGTAAAATTAATTTCTGTTcatccggaatttttaaaaagac
gtcgtaaaaataacaataaaaagaaatcgaaCAACGTCCTACAAACTTCG
CATTCGAAGTGCGGCAATAACGGCTTTGGGAGAATATATTCGAACACGTC
GCATATCACGATCAACGTGACTCTAGGTTACGTGCAACGTGACCCCCATA
AACATTACCGTGGTATCTCACTAAGTTGGCAAATCAAAAGCAAACGTGAC
TTTTATAAAGCACTACAGGTAGTGACCGAGAAAAACCGAAAAGAAATTGG
GATCGCTATTTACAGCTCGGGCGGTACGAGTGATGAAGATGACCGACTTT
ATACTTTTGTTTTACCCATGGTTGTCGTTTGCGGTATTATTCCCCTGACT
TTCCTTATATTTTGTATCTTCAAACGAATCAGCAAGCATTCCAACGAACA
AAATTGTCCACCATCctccaaaaagaaatcaaaagacaaaGAAACTACTC
CAACTTTAACGGAGAATAATTTAGCGAAATTCGAATTGCAAAACGAGACT
TATATGCCTGTTGCGAAGGTTCATAAACAACACGAGACCAATCAATGTGG
AAGTTCGCAGAATTCTGATCTTCCGAGATATATCATGTCGTATGATATTC
CTCCTTATGAAAATTCTTCCAATAGACAATCGGGTTATTCACAACACCGA
GACTCGAATCACCATAGCAACCGTTCAGAATCTCCACCCAACCGATCGTC
TCGTCATAACTCGCAATctacaacaaactctcaaagaTATTTGGAACGTC
AATTTTCACATGGTCATACAACAATAAACAGTTCTCATGAGAGCGCTACC
ACAGCTTCTCATGCTCCACAAAGTTCATGTGAAAGTCAAAGTACTAACAC
TTGTTCCCTGTGTCACCAAAGACGAAAGAACTGTCATGCAGAAAGATATA
GctatttcaataaaaaacaatatCATGACTATGTACCCAGGCCAGATTCT
AAAAACAGTGAAGAAACTTATCTTGAACTATACGCGAACCCGCAAAGCCG
TAATCATTACATGAGGACAACGTATCCGGAACTCCCTATTACCGCTGAAG
ATCGAACTGAAACCAATGGGTTGTTACGGGAAAGATGCGAGGAAAACGAA
TATCCTTATAATGAACAATACCACCAGTATCCACACCCTTCATACGGGCG
GCCACCCTACGAAGATGACTATCAAGTACAAACTTATGACGATCGTGAAA
TTATTGAATCTTCACTTTCACAATATCCTAGATTACATCGTGTTGAAAAG
CGTAAAATGATTTATTTAGAGCAAGAGATTTGTGATACTGCTGGACGATA
TTTGCCGGGTCATGATGACCTGTATGAGAGCCACAATGTTGCTCATCATC
TGAACACAAATCGTACGCGTGGTGGAAGCCTTGTCTGTACGCATTAA Coding sequence (CDS) from alignment at sc0000295_pilon:212163..214259+ >XLOC_036975 ID=XLOC_036975|Name=XLOC_036975|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4194bp|location=Sequence derived from alignment at sc0000295_pilon:212163..214259+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAATATTAACTCTGAAAGCTTATACTGTTGTCTTGTAACTTTACT
GTTATTATCACAAGTCACATGTCAAGAGTCTTCTACGCTACGCACATGCT
CTCAAAGACCTACGCCGCCGGAAAACGCTTATATCACGTTTCCGAACACA
CCACGTAATCGAGGATACGGTACCGAAAGATATCAAGAATACGATAAAGT
TTATTTCGCATGTAATATGGGTTACGAATTAGTCAGCCAGTACGCTTATA
ATGTTATGTTTGTCACGTGTGGACACGATGGACGATGGTTCCCGAAAATT
GAACAGTTAGGGAAATGTGTGTCTGTTTTTGAAGTCAAGGAGAACGACAA
CGCCACCACGTTTTGTTGTAAAAAAGGTGGCAAGTGTATCGATAAACGTA
AGAGATGTGATTGCGATGTCGACTGCGAGGATGGGTCAGATGAAAAAGAT
TGCCCACAACGTCAGAAAATCATCAACGCTTCGCGCACCGGCTCCAAATC
TTCCGGTATTATCAGCAGTCCGGGATACCCGCGTTATCAAGATTATCCGG
ACGAATTCAATTGTGTTTACCATATTAACACGGTGCAaggatatcatgtt
caaattgACTTTGAGGAATTCGATCTCCCTAAGAAACGAAATAAGAAGTG
TATGGATTCCGTAAAATTAATTTCTGTTcatccggaatttttaaaaagac
gtcgtaaaaataacaataaaaagaaatcgaaCAACGTCCTACAAACTTCG
CATTCGAAGTGCGGCAATAACGGCTTTGGGAGAATATATTCGAACACGTC
GCATATCACGATCAACGTGACTCTAGGTTACGTGCAACGTGACCCCCATA
AACATTACCGTGGTATCTCACTAAGTTGGCAAATCAAAAGCAAACGTGAC
TTTTATAAAGCACTACAGGTAGTGACCGAGAAAAACCGAAAAGAAATTGG
GATCGCTATTTACAGCTCGGGCGGTACGAGTGATGAAGATGACCGACTTT
ATACTTTTGTTTTACCCATGGTTGTCGTTTGCGGTATTATTCCCCTGACT
TTCCTTATATTTTGTATCTTCAAACGAATCAGCAAGCATTCCAACGAACA
AAATTGTCCACCATCctccaaaaagaaatcaaaagacaaaGAAACTACTC
CAACTTTAACGGAGAATAATTTAGCGAAATTCGAATTGCAAAACGAGACT
TATATGCCTGTTGCGAAGGTTCATAAACAACACGAGACCAATCAATGTGG
AAGTTCGCAGAATTCTGATCTTCCGAGATATATCATGTCGTATGATATTC
CTCCTTATGAAAATTCTTCCAATAGACAATCGGGTTATTCACAACACCGA
GACTCGAATCACCATAGCAACCGTTCAGAATCTCCACCCAACCGATCGTC
TCGTCATAACTCGCAATctacaacaaactctcaaagaTATTTGGAACGTC
AATTTTCACATGGTCATACAACAATAAACAGTTCTCATGAGAGCGCTACC
ACAGCTTCTCATGCTCCACAAAGTTCATGTGAAAGTCAAAGTACTAACAC
TTGTTCCCTGTGTCACCAAAGACGAAAGAACTGTCATGCAGAAAGATATA
GctatttcaataaaaaacaatatCATGACTATGTACCCAGGCCAGATTCT
AAAAACAGTGAAGAAACTTATCTTGAACTATACGCGAACCCGCAAAGCCG
TAATCATTACATGAGGACAACGTATCCGGAACTCCCTATTACCGCTGAAG
ATCGAACTGAAACCAATGGGTTGTTACGGGAAAGATGCGAGGAAAACGAA
TATCCTTATAATGAACAATACCACCAGTATCCACACCCTTCATACGGGCG
GCCACCCTACGAAGATGACTATCAAGTACAAACTTATGACGATCGTGAAA
TTATTGAATCTTCACTTTCACAATATCCTAGATTACATCGTGTTGAAAAG
CGTAAAATGATTTATTTAGAGCAAGAGATTTGTGATACTGCTGGACGATA
TTTGCCGGGTCATGATGACCTGTATGAGAGCCACAATGTTGCTCATCATC
TGAACACAAATCGTACGCGTGGTGGAAGCCTTGTCTGTACGCATTAAATG
ATCAATATTAACTCTGAAAGCTTATACTGTTGTCTTGTAACTTTACTGTT
ATTATCACAAGTCACATGTCAAGAGTCTTCTACGCTACGCACATGCTCTC
AAAGACCTACGCCGCCGGAAAACGCTTATATCACGTTTCCGAACACACCA
CGTAATCGAGGATACGGTACCGAAAGATATCAAGAATACGATAAAGTTTA
TTTCGCATGTAATATGGGTTACGAATTAGTCAGCCAGTACGCTTATAATG
TTATGTTTGTCACGTGTGGACACGATGGACGATGGTTCCCGAAAATTGAA
CAGTTAGGGAAATGTGTGTCTGTTTTTGAAGTCAAGGAGAACGACAACGC
CACCACGTTTTGTTGTAAAAAAGGTGGCAAGTGTATCGATAAACGTAAGA
GATGTGATTGCGATGTCGACTGCGAGGATGGGTCAGATGAAAAAGATTGC
CCACAACGTCAGAAAATCATCAACGCTTCGCGCACCGGCTCCAAATCTTC
CGGTATTATCAGCAGTCCGGGATACCCGCGTTATCAAGATTATCCGGACG
AATTCAATTGTGTTTACCATATTAACACGGTGCAaggatatcatgttcaa
attgACTTTGAGGAATTCGATCTCCCTAAGAAACGAAATAAGAAGTGTAT
GGATTCCGTAAAATTAATTTCTGTTcatccggaatttttaaaaagacgtc
gtaaaaataacaataaaaagaaatcgaaCAACGTCCTACAAACTTCGCAT
TCGAAGTGCGGCAATAACGGCTTTGGGAGAATATATTCGAACACGTCGCA
TATCACGATCAACGTGACTCTAGGTTACGTGCAACGTGACCCCCATAAAC
ATTACCGTGGTATCTCACTAAGTTGGCAAATCAAAAGCAAACGTGACTTT
TATAAAGCACTACAGGTAGTGACCGAGAAAAACCGAAAAGAAATTGGGAT
CGCTATTTACAGCTCGGGCGGTACGAGTGATGAAGATGACCGACTTTATA
CTTTTGTTTTACCCATGGTTGTCGTTTGCGGTATTATTCCCCTGACTTTC
CTTATATTTTGTATCTTCAAACGAATCAGCAAGCATTCCAACGAACAAAA
TTGTCCACCATCctccaaaaagaaatcaaaagacaaaGAAACTACTCCAA
CTTTAACGGAGAATAATTTAGCGAAATTCGAATTGCAAAACGAGACTTAT
ATGCCTGTTGCGAAGGTTCATAAACAACACGAGACCAATCAATGTGGAAG
TTCGCAGAATTCTGATCTTCCGAGATATATCATGTCGTATGATATTCCTC
CTTATGAAAATTCTTCCAATAGACAATCGGGTTATTCACAACACCGAGAC
TCGAATCACCATAGCAACCGTTCAGAATCTCCACCCAACCGATCGTCTCG
TCATAACTCGCAATctacaacaaactctcaaagaTATTTGGAACGTCAAT
TTTCACATGGTCATACAACAATAAACAGTTCTCATGAGAGCGCTACCACA
GCTTCTCATGCTCCACAAAGTTCATGTGAAAGTCAAAGTACTAACACTTG
TTCCCTGTGTCACCAAAGACGAAAGAACTGTCATGCAGAAAGATATAGct
atttcaataaaaaacaatatCATGACTATGTACCCAGGCCAGATTCTAAA
AACAGTGAAGAAACTTATCTTGAACTATACGCGAACCCGCAAAGCCGTAA
TCATTACATGAGGACAACGTATCCGGAACTCCCTATTACCGCTGAAGATC
GAACTGAAACCAATGGGTTGTTACGGGAAAGATGCGAGGAAAACGAATAT
CCTTATAATGAACAATACCACCAGTATCCACACCCTTCATACGGGCGGCC
ACCCTACGAAGATGACTATCAAGTACAAACTTATGACGATCGTGAAATTA
TTGAATCTTCACTTTCACAATATCCTAGATTACATCGTGTTGAAAAGCGT
AAAATGATTTATTTAGAGCAAGAGATTTGTGATACTGCTGGACGATATTT
GCCGGGTCATGATGACCTGTATGAGAGCCACAATGTTGCTCATCATCTGA
ACACAAATCGTACGCGTGGTGGAAGCCTTGTCTGTACGCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000295_pilon | genome | sc0000295_pilon:212163..214259 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1342-2100:1339 |
| Aaloc | 1-1338:1 |
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