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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000128_pilon:662562..669227- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036959 ID=XLOC_036959|Name=XLOC_036959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6666bp|location=Sequence derived from alignment at sc0000128_pilon:662562..669227- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACTTGACGAATGGAGTTTGGGTTCACTGAATTTCAATATAAAGAC
TATTGAACGTGATTTTTTAACCAAAGATGATGATGGCGAAAATAATGAGC
TAGTTTGTTTGCGTGTTGCAAGGTTTAGCAAAGTTCCAAAGATTGACTTT
CGAAAGGTCCGCATTGGTAAGAAGAAGACCATCAAGTTTGAAGTTTTCAA
CCCAAACAACTTTTCTACATCGATTCAGTTCAAACAATTTTCTAATAATG
ATTTTTATCTTGAGATTGCAAACTCAAGCCCATCCCGGCAAAATGAGCCA
GCGAGTGAAGAGGGAATTCCACTTCTCCTTGAACCTGATCAGCTTAAATA
TGTATTTGTTACCTGGACTCCCTCAAGCAGTGGGAACATGCGAGAAGTTT
TGACAGTACAATGGGATGGAGGATCAAAATTGCAAGTTATTTTTCTTGGA
AACTGTCCTGATGAACCACAGAAGAAAACTGCAAAAATCAAAAAGGTATG
TAATCTTTTTTCAGTTTTTGCTTCAGTTTGCAGAGTAACGACCCACGGCC
TGTTCGGACCATGCTTGGGCCACAAAAAAGTATTATTGAATCAGACCGAA
CATTTTGTTCGGACCATGTTCGGGCCATGTATTTACAATTGAGGAACATC
ATAGGAATAGTAGAATTTAATTTTATTCACCTTTCCTGGTTTATCATCAT
CCATTGTTAAATATTTTCATTAGACAAATTAAAAAGAAGACCATATACAG
TGAGGCTGGAACTTCGATTTTTGAGGATTACGATTTTACCAGCTTTTTAG
CGATTTTTGCCTCGCTAACCTAAATCTCGCAACCTCTTTACCTTGAAGGA
AGATCGAAATTAGAGTTTTTCAGCGTTCCGAAAAAAACGCAAAGCAAAAG
ATTTTTAATCTTCACAGGATCGATTCTCAACAACAAAATACATCTTTTGG
TCTTTGGTTTTGTTTCTGACGTTTTTCCTTCAAAGAATATCGATCACTTT
CCTTTTCCCCTCGAGCGCGCGAGAAAAAAATGATTAGCTCGCATTCTCGC
GCGGGCGATTAAAGATGAGGCGGCAATCTTGCACTGAGGGTGCTACTTAG
TTTCCGCCCTTTTTTGCGCCCACAATAGAATGATCCAAATACGGGGGTAT
TCCAAATAATAAACGATGTCGTTTTGTAAGTGTTTATTTTCTAAGAGATA
CAAATAGTATATTGAATATTATTAACTTATTTATTTAAGTATTTTTGAGC
CCAAATTTAACTATCTGCTTGAATAAAAAACAAATGATAGCAGCTCCGTT
TTTCCTCAAACCCCCGGGAAAAGTTTTTTTGCCGACTTAGCTATTTTACA
AATTTCGGAAAAGAACTCCCATAGGAATTCCGATACATAACCCGATTGGT
TCATTTCGGAGCGGCTTCAAGAAAGTCATAATGGCAGATGATTTTAAAAG
TTTCTGAGGAAATGTGTGGAATTTATCGATGTTGATGGCTTATTGATTCT
TTAAAGAAAAAAGATAACAGGTATAGCTTTTTCTAATCCTGGAATATCGA
GGTTCCAGCTACACTGATATATGTAAGATTCTTTCATCTACCACTCTGAA
AAAAAAAAATTCCTGTAAAGAGCCATGGCAACTGAGTATCAAAAAACCTT
GAACAGTGCCAAAGTTTCTGCCAAAAAACCTTGAATAACCACTTAAAAAC
GACCAAAAAAACCACATGCCATGGGTCGTGCAGAGTATAGCAAGGCTTCA
CTACTCGAGGAAACGTTCGGAAATACCACCAAGTTTTCGGCAATTGAAGA
ACGCAGATAAATTTTGGTCTGGGCAAGGTGCACCTATATAGTAGGGTGGA
CAGGCCAAACTAACCAAACTAATTTTATTTGAAAGTCCTTACCTTTGTGA
GAAAAATGAGGTGTCATTTTATTAGAATTGGTTAAGTATATATTCCAAAA
ATTACGTATTCCATTTTCAAAACACTAAAAAATCTACTTTTCAAAGAATC
GCCTCCTTACACCACGCCAGCAAGAAATAATTTTTGGAAGCACCAAAATC
GTGCCAAAAATGGCGAATGAAATCTAGTCTTCCGTGTGACTAAAAAAACC
GCGATTGAAAAGATGAACCAGCTCAATAGCAACAGCCATTTGTTTCAATT
TGGGTCGAGAATTTTCCGGTGCCATGGTCAGCGCTTAAATCGCTTTTTCA
CCTTGACGTCGAAAAACATGAATATCTTTGGAAAGAAAATAGATACCTGG
ATGCAGTTTTTTTTACTTGTTACCCTGATAATTCCTGATTGATTTAAAAA
AAAGAATGAACAGATTTGGATGATTTAGGTAAGTACTAATGCATTGAAGT
TCATTTTTGTAAATTCTTCCCCGTTCCGTGCAAAAAATCCCGAAAATGCG
AACCCTACCTATAGGTACCTCGGAAATTTGTCTAAAAAAGGCAAAAAATT
GCTAAAATTAGCAATTGTCCTCCTTTAGGGGACACTCACAAATCAATTTC
AGGTTCGAAAAATGTCGATTGACGTTTTAAAAGCTGACCCACCCACCCAC
ACCCTAAAACGTCAAACACTTGAAATCCCCAAAAATCAATGAAAAACTGC
CTTCATAGCTGTTTCGTCAGTCATCTTGATTTTCACTACGACTCGCATAG
TTTATATTTAAAAAAAGAAATAGAGATAATTTCTAAACTTGTTCACAAAA
TTCCCGTAATTAATTATATTAGTATATAGCGACAGAAAGCACGGCCATCT
GCAAAAATTCAAGGGCCGTTCGGGCCATCAAACAAAGAAAAGACATAACA
TCGGGTCGTTTGTTTTGGTTTTCAAAACAGCCGAAGCGATATGGCAAAAT
AACATTTGTAATAAAATAACTTCTCTAAATTGATTTTTCTGGTGAAAATT
TCTTTGCCATAAAAGAACATCAACAAATTTTACCCCTACCCCCTTACAGT
AACGTCCATTTTGATGTTTTCCATGGCAAGTCTGAGTTTGGAAGGCTCCC
CCAAATGACACTTCTTGTAAAGTTTCTTAGCATTTTAACCTTAAAACAAC
CAAAATCAATATAAAAGGGGTTGCACGCTTTTATAAACTCTTCCGTCCCT
CCACTCTGTATACGTAGCAAGGACATGCGAGAGGCGAGAGTGACAAAAAC
AAGCCTTAAATGTCATGTATATATGTGAAGAAATAAGAATTTCTGTCCAA
CTATATTCACTCAGGAGATTTGGGTGGCAGAGCAGCATATGCATTTCGTC
CTTATTGGGACTCGTCAGCACTGCATACTGCACCCTGGCAGGCTAGATCG
ATTTAGCCAGCATCTCTAAACCACAAAATCACTTGTGGTTCAAACTGAGA
GAAATAGTGGACAGAAGGGAAATTCCCTACGGAATTCTTTGTTGACTCCT
TTGGAGCCAAGCTTTACCGTCTCAAGAGGGAGGAAAGCCTCAACACTGCA
TGAGAGGAGATAAAGAATATATATGTGAAGAAATAAGAATTTCTGTCCAA
CTATATTCACTCAGGAGATTTGGGTGGCAGAGCAGCATATGCATTTCGTC
CTTATTGGGACTCGTCAGCACTGCATACTGCACCCTGGCAGGCTAGATCG
ATTTAGCCAGCATCTCTAAACCACAAAATCACTTGTGGTTCAAACTGAGA
GAAATAGTGTATAGCATGAAAATAAAATGTTTTCTCCTGTCAGATCTACA
AACGACAAAGAGTGGCCGAATTCTTTTTCCTCTTAGAGAGACGATGTTAC
AATGAAAGGGTAATTTGTCCTCTCTGGGTCCCTCTGTCTTTATCCTGGCT
TGGGACAGGCTGGCTGTCATTCAAGACAGTCAGGCGACATTACCCCAGCG
GCCTGTACAAGATGACAACAAACTCCAGGTAGACTGACAGGAGAAGAAAA
CAAAACATGAATCAACAAAGGTGTAAACACCTTAGACTCCTTTGGAGCCG
ACTGCACTAGACACCAGGCAGGGGACATCCTCGCACATCCTGATGTACTA
GGCAAATATATATAGTATGAAAATAAAATGTTTTCTCCTGTCAGATCTAC
AAACGACAAAGAGTGGCCGAATTCTTTTTCCTCTTAGAGAGACTATGTAT
ATAGTTGTTTTGGAGACCTATTGAATAACTAATTTATCACGTTTTTATTG
GCTGAGAAAAGTAATATATGTGGAGTAATTTGTTATTCAATAGGCTGTCG
CGTTCAAAGTGATCCAGAGCCTCCTCGATTTGCAAGCTGTAAACAAAAAA
TTTAATGACAAACAAACGCCATATTAAAGTAAGATGAAAACACTAAACAG
ATCTCAGGGGGATCTTGAATTTAATAAAGAGTTGTCGCAATAAACAGACT
GTACCCTTATAATCATAAAGGTTGGCGAGTCCAGTCAAAACACAGATTTG
ATCTGTAGCGTCATGCTTCACATTTACAAAATGGAGAACATTTTGCTATA
AACCAAGGAAAATGTGTGAATTTTTTTGCATACTATCATGTGCAAAAATA
TTGAAAAAAAGGAAGAAAAGAATTGTGCAGACCTTTTGCTATTCACAATG
TCATGTTGAATTAATAAAAAACTCAAGCAGTACCAGACCCGGGGGTCCTG
GTCGTAGGAAATGACTTCTACCAAAAATAACCACAAAAAAGTATTTTTAT
GAGTATTTTTTTCCACACAAGTATAACACCAGTGTAGTAGCTGGGGGTCC
TGTATATATATTGTATTATTATAGAATTCAAATCCAGGTTTTGATGTTTC
TGGATCTGCAAAAGGTAAGTTTAAATTTACTTCTACTTTAATGTTAATTT
TAAGTCCAAGAAAATACCTTATCTTTCAGATTACAAAGACTGAAACTCTG
AGTCAAAAAATTAACAACAAAGGATCCAATGAAAACCGTAAAGCACTTAC
AGCAATACAGCCAGTCACACCTGCCAGAAGAACAACTTTTCTTGTCAACA
AACACCAAAGTCAACTCGCAGTTAGTGATGAAAACAAAGAAAACTCTTCT
ATATCACCCATCAGTTTTGAGAAGCCCTCAAACATCCCTAAGAAAGCACA
AAACAGTTCAAGAAATAGAAATACATTGAAGATTGCAGCAGATAATGATC
CCCGTAGACAGACTTTCAATATTTCAAAGAAAGAAGATGCTTCACGTAAT
CTCTTTGGAACTTCGTCGAAAAAAATCAACAAGAAACCTTCAGCTAAACC
CCCAACTGAACCACCAAACCCAACCCAACCAAAACCCTTCTTAAAAAGAA
CTTCCATATCTCAAAGTTTGCCAAGTAAGTCAGACCAACCGTTTATTTTC
TTATCTATAAAAATTGCCAATCCTAACTCCAACCCCAAATAGTTTCTTGA
CCTTTTCTAGATACTGGGATGCTAGACAACAATAGCCATTTTGATTGTGG
AATCAATCATGAATTCATAAAATATCCAAAGACGAGTTTATTTTTCTATT
ACAGTTGTCTCTCTGCCCCCCCCCCTTTGCCGAGGGGACCAATGTTTTTA
TTCGAATTACAGAAAGATTCTAACCATGTTTCAGTTCGAATTACAGAAAG
ATTCTTAACTATTTTAATTAGAGAGAGTTTACTGCCAGCTGACACACAAC
ATTGTTTCAACGTTCATCTAACGTTATAGAGACGTTGTGAATATCAGATT
AACGTTGAAACAACGTTGGTGTCAGCTGGGCTAGGTATTACGATGTAAAT
TTACATTTTTTTATAGAACCAACGTTGAAGAAAGGTCTTGCTATGAAAAG
GTTGAAACTGACAAAAGAAGCCAATCAAACTATGCCGAGACATCCAATGC
CTTTCGCTGCTAAGAATATGTTTTACGATGAACGCTGGATCGAAAAACAA
GAAAGAGGTTGGTGTCGTAAAAACAGATATTTGAACATTTTAGTCATACC
CTTTACTTTATCCCGATTCTTATCATATATTCAAATGCTCTGAAAGTTTT
TATTGAATCCTCTGGTCTATTGCGTACCCAGACTGTCTGAAACCTGCTCC
CGTAAAGGAGAAAGATTTGTCGGGATTTTTAAACTTAGATTGGAAAAAAT
TTGCACTCAAAAGCTGGGTTACCCTGACTTAAATTTTAGTTATTGAGACA
CTTAAAGCCCGACTTTATAATTTCTGATAAGATAATTCGAAAAAAATGAT
TTTTATTTAAACAATATTTTGTTTCAGGATTTACGAACTGGTTGAATTAT
TTGTTGACACCATTTGAAGAGAATTGTCCTGCTGATAATTCTCAACCTCA
GGATCGAAGAGGTAAAACTTTGAACTAGCAGCTCAATAAATATCTCATAA
ATTTGGTGTTAAATTAGTCTCCCGTTTTCGCTGCTCCGTATTTGAACGCA
TAGCTCAAAGCAAAGCAAATCGACTTTTAGTTTTAAGGTTATATGTAAAT
TTCCTTGGGTTTTATATTTTTTAGAAACTTTCACTATTGATGCTCAAAAG
AAACAAGAAATAGCTCCTACACGAGAAGTCCTCTCTTTCCGCGCGTATTC
TTTGCGTCGCCGAATGGTCCAATTGAGACGCTCTGCGTGCAGGTGTTATC
AATCTGAAGATTTTCGGTTTGTGATTCAAAAGATTGAAAAAGAAGTGGAG
TGTGGTTTGATTTCTGTTAGAGGAGAAAAACACATCTTGGCTGACTTAGG
TATGTTCAGTTTCTAG Coding sequence (CDS) from alignment at sc0000128_pilon:662562..669227- >XLOC_036959 ID=XLOC_036959|Name=XLOC_036959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2700bp|location=Sequence derived from alignment at sc0000128_pilon:662562..669227- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACTTGACGAATGGAGTTTGGGTTCACTGAATTTCAATATAAAGAC
TATTGAACGTGATTTTTTAACCAAAGATGATGATGGCGAAAATAATGAGC
TAGTTTGTTTGCGTGTTGCAAGGTTTAGCAAAGTTCCAAAGATTGACTTT
CGAAAGGTCCGCATTGGTAAGAAGAAGACCATCAAGTTTGAAGTTTTCAA
CCCAAACAACTTTTCTACATCGATTCAGTTCAAACAATTTTCTAATAATG
ATTTTTATCTTGAGATTGCAAACTCAAGCCCATCCCGGCAAAATGAGCCA
GCGAGTGAAGAGGGAATTCCACTTCTCCTTGAACCTGATCAGCTTAAATA
TGTATTTGTTACCTGGACTCCCTCAAGCAGTGGGAACATGCGAGAAGTTT
TGACAGTACAATGGGATGGAGGATCAAAATTGCAAGTTATTTTTCTTGGA
AACTGTCCTGATGAACCACAGAAGAAAACTGCAAAAATCAAAAAGATGGC
ACTTGACGAATGGAGTTTGGGTTCACTGAATTTCAATATAAAGACTATTG
AACGTGATTTTTTAACCAAAGATGATGATGGCGAAAATAATGAGCTAGTT
TGTTTGCGTGTTGCAAGGTTTAGCAAAGTTCCAAAGATTGACTTTCGAAA
GGTCCGCATTGGTAAGAAGAAGACCATCAAGTTTGAAGTTTTCAACCCAA
ACAACTTTTCTACATCGATTCAGTTCAAACAATTTTCTAATAATGATTTT
TATCTTGAGATTGCAAACTCAAGCCCATCCCGGCAAAATGAGCCAGCGAG
TGAAGAGGGAATTCCACTTCTCCTTGAACCTGATCAGCTTAAATATGTAT
TTGTTACCTGGACTCCCTCAAGCAGTGGGAACATGCGAGAAGTTTTGACA
GTACAATGGGATGGAGGATCAAAATTGCAAGTTATTTTTCTTGGAAACTG
TCCTGATGAACCACAGAAGAAAACTGCAAAAATCAAAAAGATTACAAAGA
CTGAAACTCTGAGTCAAAAAATTAACAACAAAGGATCCAATGAAAACCGT
AAAGCACTTACAGCAATACAGCCAGTCACACCTGCCAGAAGAACAACTTT
TCTTGTCAACAAACACCAAAGTCAACTCGCAGTTAGTGATGAAAACAAAG
AAAACTCTTCTATATCACCCATCAGTTTTGAGAAGCCCTCAAACATCCCT
AAGAAAGCACAAAACAGTTCAAGAAATAGAAATACATTGAAGATTGCAGC
AGATAATGATCCCCGTAGACAGACTTTCAATATTTCAAAGAAAGAAGATG
CTTCACGTAATCTCTTTGGAACTTCGTCGAAAAAAATCAACAAGAAACCT
TCAGCTAAACCCCCAACTGAACCACCAAACCCAACCCAACCAAAACCCTT
CTTAAAAAGAACTTCCATATCTCAAAGTTTGCCAAATTACAAAGACTGAA
ACTCTGAGTCAAAAAATTAACAACAAAGGATCCAATGAAAACCGTAAAGC
ACTTACAGCAATACAGCCAGTCACACCTGCCAGAAGAACAACTTTTCTTG
TCAACAAACACCAAAGTCAACTCGCAGTTAGTGATGAAAACAAAGAAAAC
TCTTCTATATCACCCATCAGTTTTGAGAAGCCCTCAAACATCCCTAAGAA
AGCACAAAACAGTTCAAGAAATAGAAATACATTGAAGATTGCAGCAGATA
ATGATCCCCGTAGACAGACTTTCAATATTTCAAAGAAAGAAGATGCTTCA
CGTAATCTCTTTGGAACTTCGTCGAAAAAAATCAACAAGAAACCTTCAGC
TAAACCCCCAACTGAACCACCAAACCCAACCCAACCAAAACCCTTCTTAA
AAAGAACTTCCATATCTCAAAGTTTGCCAAATCAAACTATGCCGAGACAT
CCAATGCCTTTCGCTGCTAAGAATATGTTTTACGATGAACGCTGGATCGA
AAAACAAGAAAGAGATCAAACTATGCCGAGACATCCAATGCCTTTCGCTG
CTAAGAATATGTTTTACGATGAACGCTGGATCGAAAAACAAGAAAGAGGA
TTTACGAACTGGTTGAATTATTTGTTGACACCATTTGAAGAGAATTGTCC
TGCTGATAATTCTCAACCTCAGGATCGAAGAGGATTTACGAACTGGTTGA
ATTATTTGTTGACACCATTTGAAGAGAATTGTCCTGCTGATAATTCTCAA
CCTCAGGATCGAAGAGAAACTTTCACTATTGATGCTCAAAAGAAACAAGA
AATAGCTCCTACACGAGAAGTCCTCTCTTTCCGCGCGTATTCTTTGCGTC
GCCGAATGGTCCAATTGAGACGCTCTGCGTGCAGGTGTTATCAATCTGAA
GATTTTCGGTTTGTGATTCAAAAGATTGAAAAAGAAGTGGAGTGTGGTTT
GATTTCTGTTAGAGGAGAAAAACACATCTTGGCTGACTTAGGTATGTTCA
GTTTCTAGAAACTTTCACTATTGATGCTCAAAAGAAACAAGAAATAGCTC
CTACACGAGAAGTCCTCTCTTTCCGCGCGTATTCTTTGCGTCGCCGAATG
GTCCAATTGAGACGCTCTGCGTGCAGGTGTTATCAATCTGAAGATTTTCG
GTTTGTGATTCAAAAGATTGAAAAAGAAGTGGAGTGTGGTTTGATTTCTG
TTAGAGGAGAAAAACACATCTTGGCTGACTTAGGTATGTTCAGTTTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000128_pilon | genome | sc0000128_pilon:662562..669227 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1111-1350:241 |
| Aaloc | 1027-1107:488 |
| Aaloc | 943-1023:892 |
| Aaloc | 496-939:1838 |
| Aaloc | 1-495:6667 |
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