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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000128_pilon:714095..717693+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036956 ID=XLOC_036956|Name=XLOC_036956|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3599bp|location=Sequence derived from alignment at sc0000128_pilon:714095..717693+ (Clytia hemisphaerica_ch_hm2_pilon)
acgaagaaaaatttgaaagaggTCGAGGAACAAATGACCGGCGGAGGACA
ACGTCCAACCATTAATCATTACATGAAATGTCGGAAAAGAAGAGTATCAG
CAAGACAATTAGAAAAACGTCAACTGTCCATCGTCAAAACACCTGTCCAC
GAAAAAGGAGACTTTGCACCACTACCTATCGAAGTTTGTTTTATATCCGT
TTAGAAAATCTAAGATTACTTTTCAAATCAGAAAGTTATGACTTCATTGC
AAACTTGCgattttaaaactattttttgctgCGTGTCGCCTTACAAAATT
GCCCTCGGGTGTTTAGTCCGTTGAATTTAAATTAGATTTAGGAAGCGTAG
TTTGAATGAAATATAAAACACAACTTCtttttatttcaccttttttttca
ttagtttttttgattttttttcggtaatCGCATCATCttcattttgacca
ttttcttgaattttcaggTCATGTTTCGGATTATCAAGTTTATCCCGTTG
GTTTCATTGGGATCGCTGACGTTAACGTCAAAACAAATGCGAGACATCAT
CATTATGTACGTTCACAGCCAAGAAGGAGCACGACGTGTCATTCCAGTCG
TTCAAAATATTCCTGAACATTCGGACCTAGACTCTGACGAATACAAATCA
GAATCTAAGAGGTGTCACACTCACTACAAACAGCTAGGTATTTGTCCCTT
GTGGTACTTTCGTAAAAGTGATCTCTTAAAATCAATGCGCGTTTCGTGAT
AGAATTCATTCACTACTACTACTTTGATATGAAGCTTTCTTGGTGCCGTT
AAGTTTATAGGACTACACGGACAGAGCAGAAAGTTATCTACTGTATACTC
CatttattcttcaaaaaagaGAGGACAAAGATACACCGCTGGGAATAGTT
GCTATAAACTGATTTTCAAACTTCAGGTGTCATGCTGAAACGGACAACGT
GTCTTTTTTCAACAAGAGATCGATTGGCTGAAGTTGGAAAGATTCTTGAT
CAGGTTAGAAGTTTGAATCTTGGTATTTTCTACGTTCAGTGTAATTTAGC
TTTAAAATTTAAGAACTTTTAACCTGTTATGTTATATGAAGAAATGCCAC
AAAGGCTCAAAACTCCTACCGAAGGTCGAAATACCCAACGGGCGCTAGTC
ATTATATCATCATAtttttttCCAGCTACGAGACTCGCACGTTAGAATAT
GCACCAAACTTGGAAGCGACCTTGCATACAGTTGCTATGGCATCTTTTTA
CATGCTTTCATAGCTGGATGGGAGGATGATGAAAAATCTAAATCCTTTCA
AGCAATCAAAGGTATATATAATCTTAAATAATGTTAGTATTGGATTATTT
GTATTGGGCAATACAcgaatttcctattagcagactCATGTAGAAAATTC
ACGAAAAAACGCACAAATTGCACACATAAATatataaacatatttttttc
aaatatccaaCGTATGAGGTGATCTTTGCATTCTCAACCAATCAagagct
ttactcgacgttttttccgacttttttacatgaatctgttAATAGTGTAT
TTTGACAAACTTTAACTCGAGTCGAAAAATAACACTCCTGTCTCATCCTC
TCTAGTCACCTAATGATTATCTTTTAACTAGTGGGTTTAAAATTGATGAG
CTAAATATCACGAGAAAAGGAAAATGCAATAGGTCGAGCTTGCAACTTCT
ATTGCTtgtgggggcgtacggtatttcggtattgcagaaatcgacccttt
tttcttcggaattttagaaatcgggcaaaattccttcggtatttcggaat
tctgaaattgtttcggtatcggaaatccatgaatttttgcttcgaaattt
cggtattataaagtttttatccccctttttcggaattcatacatgaaaaa
tcaaatctgatgaaaaattagttaaaacgagggaaaatacctcaaaaaat
cggtatcggaattgcaagtattttttcacggaatttcggaaattttggca
aaattattcggtatttcggaaatcgcaaaccccgtacacccccccTTGCT
TCGCTATTGCTTCTGGTTTTAAAACGTGGGAAGTACGATTCAACCCGAAT
TGTTTTTACCACCAGAGTCCTCACCAGTTATGTGACACGGGATGCTGTAA
CGTTTGTCACAAACAAGTAATGACAAACGTATTACTATTACCAGTTTCTG
GTAACCGTGTTCTTGAAACCAgagtttgttattttgtttGCCCTCTACTT
AAATCTTTCGTGATTTAGGTGCATCTTTATTAGAAGAAAGAATTGGATAC
TTAATGAAGTCAAAGCCTGGGACCATGCCAGGTTATGAAAGGTGAGAGCT
AatttaaattgatttaaaaGGCTCTGTCAGAAGTTGAAAGAATATCTTTA
GCACACACTTGCTCAAAGAACAAGcttgtatattttttgatttttctcaa
agaaaaaagcttgtatctttttgatttttttactttagatACATCCGAGT
TTTCTGCCGAGAAATCTTCCTCAACAAAGCAAGCAAAACTGAAAAAGGAT
TTTGGATGGCACAGATTTTGAAACCATATCCCATTTTCTTTCAAGCAAGA
CTTCTCTTCATTCTGTATGGTCCAACTGATCTTGAAAATGGTAAGGGCAC
ATCATGTTGTTATGGCATATACCAATTACTAGTTCCAAGCTATCCGATGG
CCATTTGTCTAGTAATTACGTAATGTTCAAAAGGATAACCATAAATATCG
TTATTTTATATTTGATCTGATTTGATAACCGTGTACTGTGTAAAAATAGA
GTAATATTTCGAAACTTTTTGTTTCAGATGACTTAATTTGGGATGAAATG
GCTGTTTCATCAGACATTGCAACTGAAGATTTAAAAGAACTTGCAGAAGG
AATGGTGGCTTTACAAGATGACCAAAGAGGTTTGTGGAGCGCAGATGATA
TCATAAGCATCTTTGATGAAATCACAAGTAAGTTACATAATCATAGACTA
AACTTTATACTTGTTCTTCAGTTCAGAGCTTTTTCAACTAATTTCAAGGA
ATTCGAATAACACTCTCGTAATCAAGACCgggggggTTACTTGGGCAAAA
AAGGTTACGGGGATGTCAGCAGGATCTAGCAGGATACCTTTTTTCACCTG
AGTCcgaggtagggtcgcaaaacgaaaaaaagggtacctttttagggaaa
tttggagaaaaaaaggaaatttttggaaactttattcgcaaattttgccc
aaattttcagaaaaacgaGTCCCATGTATAGTAGGgtcaatttttcgaac
ctcagcggttCACctccgtcggtcggcaagggtagtacccagCCCCTGGA
ACCCTGATCGTCATTATTCTCCTCAAGCGAATTAGATCAAGCTatacaaa
aacatttaaatcTAGTATGGAAGAGAACAACCCTTGGCACTTATCATATT
TTAAATTAGTCATTATGAATTTGAATGCATATGATATGCTCATTTTAGCA
ATTTCAATGGATTGGGATATCGAGAACATTGCTGTCTTTATGAAAGAATG
TGGAGACACAATGTGTTGTGAAGTGTTGGGAAATAAAGCTATCAATGGA Coding sequence (CDS) from alignment at sc0000128_pilon:714095..717693+ >XLOC_036956 ID=XLOC_036956|Name=XLOC_036956|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2184bp|location=Sequence derived from alignment at sc0000128_pilon:714095..717693+ (Clytia hemisphaerica_ch_hm2_pilon)
acgaagaaaaatttgaaagaggTCGAGGAACAAATGACCGGCGGAGGACA
ACGTCCAACCATTAATCATTACATGAAATGTCGGAAAAGAAGAGTATCAG
CAAGACAATTAGAAAAACGTCAACTGTCCATCGTCAAAACACCTGTCCAC
GAAAAAGGAGACTTTGCACCACTACCTATCGAAacgaagaaaaatttgaa
agaggTCGAGGAACAAATGACCGGCGGAGGACAACGTCCAACCATTAATC
ATTACATGAAATGTCGGAAAAGAAGAGTATCAGCAAGACAATTAGAAAAA
CGTCAACTGTCCATCGTCAAAACACCTGTCCACGAAAAAGGAGACTTTGC
ACCACTACCTATCGAAgTCATGTTTCGGATTATCAAGTTTATCCCGTTGG
TTTCATTGGGATCGCTGACGTTAACGTCAAAACAAATGCGAGACATCATC
ATTATGTACGTTCACAGCCAAGAAGGAGCACGACGTGTCATTCCAGTCGT
TCAAAATATTCCTGAACATTCGGACCTAGACTCTGACGAATACAAATCAG
AATCTAAGAGGTGTCACACTCACTACAAACAGCTAGgTCATGTTTCGGAT
TATCAAGTTTATCCCGTTGGTTTCATTGGGATCGCTGACGTTAACGTCAA
AACAAATGCGAGACATCATCATTATGTACGTTCACAGCCAAGAAGGAGCA
CGACGTGTCATTCCAGTCGTTCAAAATATTCCTGAACATTCGGACCTAGA
CTCTGACGAATACAAATCAGAATCTAAGAGGTGTCACACTCACTACAAAC
AGCTAGGTGTCATGCTGAAACGGACAACGTGTCTTTTTTCAACAAGAGAT
CGATTGGCTGAAGTTGGAAAGATTCTTGATCAGGTGTCATGCTGAAACGG
ACAACGTGTCTTTTTTCAACAAGAGATCGATTGGCTGAAGTTGGAAAGAT
TCTTGATCAGCTACGAGACTCGCACGTTAGAATATGCACCAAACTTGGAA
GCGACCTTGCATACAGTTGCTATGGCATCTTTTTACATGCTTTCATAGCT
GGATGGGAGGATGATGAAAAATCTAAATCCTTTCAAGCAATCAAAGCTAC
GAGACTCGCACGTTAGAATATGCACCAAACTTGGAAGCGACCTTGCATAC
AGTTGCTATGGCATCTTTTTACATGCTTTCATAGCTGGATGGGAGGATGA
TGAAAAATCTAAATCCTTTCAAGCAATCAAAGGTGCATCTTTATTAGAAG
AAAGAATTGGATACTTAATGAAGTCAAAGCCTGGGACCATGCCAGGTTAT
GAAAGGTGCATCTTTATTAGAAGAAAGAATTGGATACTTAATGAAGTCAA
AGCCTGGGACCATGCCAGGTTATGAAAGatACATCCGAGTTTTCTGCCGA
GAAATCTTCCTCAACAAAGCAAGCAAAACTGAAAAAGGATTTTGGATGGC
ACAGATTTTGAAACCATATCCCATTTTCTTTCAAGCAAGACTTCTCTTCA
TTCTGTATGGTCCAACTGATCTTGAAAATGatACATCCGAGTTTTCTGCC
GAGAAATCTTCCTCAACAAAGCAAGCAAAACTGAAAAAGGATTTTGGATG
GCACAGATTTTGAAACCATATCCCATTTTCTTTCAAGCAAGACTTCTCTT
CATTCTGTATGGTCCAACTGATCTTGAAAATGATGACTTAATTTGGGATG
AAATGGCTGTTTCATCAGACATTGCAACTGAAGATTTAAAAGAACTTGCA
GAAGGAATGGTGGCTTTACAAGATGACCAAAGAGGTTTGTGGAGCGCAGA
TGATATCATAAGCATCTTTGATGAAATCACAAATGACTTAATTTGGGATG
AAATGGCTGTTTCATCAGACATTGCAACTGAAGATTTAAAAGAACTTGCA
GAAGGAATGGTGGCTTTACAAGATGACCAAAGAGGTTTGTGGAGCGCAGA
TGATATCATAAGCATCTTTGATGAAATCACAACAATTTCAATGGATTGGG
ATATCGAGAACATTGCTGTCTTTATGAAAGAATGTGGAGACACAATGTGT
TGTGAAGTGTTGGGAAATAAAGCTATCAATGGACAATTTCAATGGATTGG
GATATCGAGAACATTGCTGTCTTTATGAAAGAATGTGGAGACACAATGTG
TTGTGAAGTGTTGGGAAATAAAGCTATCAATGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000128_pilon | genome | sc0000128_pilon:714095..717693 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1006-1104:3501 |
| Aaloc | 856-1002:2830 |
| Aaloc | 703-852:2490 |
| Aaloc | 631-699:2271 |
| Aaloc | 493-627:1176 |
| Aaloc | 418-492:929 |
| Aaloc | 196-414:468 |
| Aaloc | 13-195:1 |
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