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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000128_pilon:549897..556663+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036951 ID=XLOC_036951|Name=XLOC_036951|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6767bp|location=Sequence derived from alignment at sc0000128_pilon:549897..556663+ (Clytia hemisphaerica_ch_hm2_pilon)
CTACATCGtgaagacaaagaagaagtaAGGTATGTGTTATTATATACGAT
TTAACAAGCATAAAAAGACGCAATCATTCTTTCGACAAATCAGCCTTCAG
GAATAAAATCCAGCCGAATTGATTTATCCGATCAGCTAGTACGTGGTTTC
GGCCGAAATTGCATTCTGGTCCGTAAAATACCAATCAGACAGTTGGCCGA
ACCAAAATTTTGCTTATCATCTCCTCATCTTCAATGATCAATATCTTAAA
TATATAAGATCGAAGAAAACTTGCGGCAGTATTTCCAAGAGCgattgtat
cacgtccatccgtaaaaaatattgttgcagGTGGCTCTGGTTACGAGATT
Gagataactcggaaagctaaaggaagcaaaattttccgagttaaaaatga
aaaataactcggaaagttaaaggaagcaaaattttccgagtttaaaaaaa
CGATGAATAACTTgaaaagctaaaggaagcaaaataaactgAGTTaagaa
atgacgtcactaaattccgaaaatgacgtcataactcgagataactcgtt
tttttcgtaactcggaaaaaataactcgggaatttcgGGATTCGTGCCCG
AACGGCTAACCAGTCTCAGTAAATTCATCAAAACGGACTTTCATTTTTAG
AGTTAATACAGATGGGCAATTTGAAGAACTCCCAGAACCCGAAGAGAAGA
TGTAAGTAAAGAATGTTTTGTCTTATGCTatcgggtgtgccacaaaaaag
ttaccctctttgatttgatattgcaggcagtagcagaaagatttttcaaa
gattattttgaggaaagcctaacttaaaatttggtgtattactttttaat
tttacttcattagttcaaaaattatgttcaaaaacctaaaatgttgattt
tagaaaatgtcaaaaaaggctaaaaacaagGGTATCAATTTATGAGAGAA
ACGTTTTTACCAAAACCTTAAAGCACAATGTCTTGCTCCTTGTAACACTC
TCTATGCTTtcttttctattgtctttttttacttctgtTTTTCCCTTGCG
CATAAACAAGATGCCTCCGAATGTTTCAAAcctcacaaaattttcaacat
cttcccAAGAGTTTCCAAAGGTTTTTATGTGTGTGCATCATCGTTGAGAA
AGGTGGAGAAggtgaaagttttgagaaaaatgcttCGTTTGAACCGTTGC
AGCTCATCTCGATTCACAGATGATGGAATGTATTTACAGTAATGCATTAT
CTTGTGAACAAGTGCTTTTTTCATAATggaaatacattttttgaacATGA
CTTTTGAactaatgaagtaaaattaaaaagtgatacacctaattttaagt
taggctttcctctaaATGATTCCGAAATAATCTTTGAAAGATCTCTTTTC
TATTGCctgcaatatcaaatcaaagcgggtaacttatttgtggcacaccc
ggtaagTAATTTGGGTTGGGTTGATTTAGTCGTCAAACACTATTTTCGTT
GCAAAATGGTACCATTATGGATCAGTCACATTCCTAAGCCAAACAGGTTG
CGCTGTGTTGGCTTCACCACAAGTAAAGTAAGACTTCTATTACAACTACT
GTAACTATAGAAATCCTTCTCTTGGGCCAAAGTATTACCCAATGAAGCTT
TTCAGTTACTGAAAATACTAATCGCTGtgactgattgattgattgattga
ttgattgattcattgattcattgattgattgattgattgattgattgatt
aaacCATTAATCCATTGAAAAAGGTTCATTAACTTTCAAGCTCTGATTTC
AAAATGTATAATGGGATGTAATTGAGCAGTGTATATTCGCGGTACGAGAC
TGCAAAGTCACAGTTTTTCAATTAATTCTCATGCTCAGCACCAAAGTTTT
TGGccaaattctttttcattttcctacaGTTTCTCCATAtttttttGGTG
AGAATTCGCGGGAACGACATAACGACGGCACACACCTTATCTTATATTCC
GATGGTGGTTGATCCGCCCACGCTTAAGCTTtataaaggagcgggccaat
tttcCATCAGAAAGGATtaatagtcggcctttgatgtgttgcatccccag
tcgggttcaaatGTAAACGAGATGTTTCggggggggTCCAAGCCGCCCAC
CGCAAAAAACTCTTGATGCGCTCTTGCAAATTCCGTATTCTGTTAGATGT
TGAAAACTTTAGAGAAATTTAGAGCTTAGGCGTGTCGGATAGGAATTTCt
acatctgggtgccagattaGACACCCAAAATATTCCCTTAGAAGAGAATT
GTCGGAAATCTACAATATCCATAGCATACAACTttatcatttttggacct
acgtCGGTGGGgaagaggtcctataaattaaccagtgttcgtccgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttaccaacttttctcaggataacatagga
atcttttggtttttggtacaaaggtgcaaaatggtggtggccaaaatgtg
acggagcccgattttcaaaaagaaaatttgggcCATAAAGCGCAATCTTT
TGgtagaaagtgtgcaaaattatttatcttaaacttagaactgaaaggaa
tttacattggaaaaaacttttttactggatcaattttatgaaagtgtcta
gggtcaaaagtcccGGGGGCTaacgaaaaattcataaatctttggggggg
atctaatttttgcctgggacctaaacccaggctgacgctatgattttggt
ttctaaacgtttttttttttataagaaacaaacaactaattttaatagat
cgtcactatttgtgttttgaatgattttttaatggtcacgttcacgtaga
tatcaattatgtatgtgttaaatgcataaccaggtaggtccataaaagta
tcacttctTCGTTTGCAATTCATCTTTCAGTCAAAGTACGAAAGAGACAT
ATGATCGTTTCGATAAATTTGAAAAGGCAGAAAAGAAGCAACCAACTTCA
CCAACCAAACAAAGTTCGCCCTCCAAAAGAACTAATTCTGTCACTAAAAC
TATGGAAAATAAAGACCTTGAAATGCTTGCAAGTTTAGAAAAAGCAAAGA
CTTTCTTGAACGAATGGATTGAAGGCTACACAATAGGAGATTCCGCTACA
AAACGTTCTAATACCaattcaaccaatcaaattaatACAAATCAGCCACG
TGATGAGAAAGAATTCCAAGCAAAAGTGATGAATTTCTTATCCAAGAATC
CTGATTGGTCGAACGAAGCAACTTTGTCTGAAAACTTTcaagagaaaatg
aaagtgaagagcaataaggttttatctttttGTCTCTTTGGAGCTGAGCT
CTACTTtagacgtacaaactttcgcgaccAGAAACTTTCGTGATTTACGC
TAATGTTggtctttttctttgaaaattcttaacagggcaattcacgaaag
tttatgctcgcgaaaaaatctcagaaaaattagaattctataaaacctcg
aaatcCTAATAGATACcaaatttttggcattttcttatCTTTTAATCCCT
TTTTAACAACCATCTATAtcggatttaaggaatattttcacttttaaagc
aatttttattcaaaaattctcatttttatccaactattcgcgaaagttta
tgcttgcgaaaaatattttgcgatttttttacctcgcgaaagtttctgct
cgcgaaagtttgtacgcctaaagtattcttTGGATTTATTACTTTGGTGT
ACTTCCTATTAGAAAGAGTCCGGATAATATTTCTCAATAAGTTTTAATTT
ACATTTGGGGTATTAGAGCCAGCCGAAACACGCTTTGTCCTAAAACACAC
GACATATTAAGTAGTTCAACTCTTAAACAAAATCTGATGTAAAAATGTCT
CTTTGGCAAATCAAAATTGATACAAGACAAAAGAGGAAATTTTCAGATTA
CTTTAAAGATCTTTGTTTGAGTGTGATTACATTTCAATTATTAGGAAAAA
CCATACATGCCTCCTGTCGATTGGAAATCACAAGCTCTACTCAGGAAGAG
AATTGTCAAAGAAAAGGTGGTTTCTAGGTAATTTCTTCATTAATTATACG
GCTGATTACACTTAGCTTAGAAATATAAGGGAGGAGCGGGGTGATTAATC
CGTAATAGCCCTGCTGTAATCACCCCGTGAAGAAAAACCTTAcgcctttt
tttcaaaaaactaatCGGTTTCATATCATAGTTGTGTAATCCGACTAGgt
tcgggctattttgaaatgttttcaataaaCCTCGGGACTATCATTCCCAA
ATAGCCCTCCAAACCATCCTATTACTAGTTAGTACATATTAAATCATTGA
ACTCGTTCCATCTTTGACATGCACCACTGTATAGAATTGACTTCACCAAT
TTATGTAATTAGTctacatgtttgttttttttgaaccCAATACGTTACTT
GCAGCAATTTAGCTGTCGTAAAAGTGACGCAATGACAGAAGATATTACGG
GATCATTGAAACTCtggattttacattttttagctcgctaccattttctt
ttcttttacccctctccaggattttGCAGTTCAGTTGATAGTCTATACCA
CTGTCTCTATTTCAGTTTAGACAAATTACAAGACATTCTCGAGTTGTCAA
AGTCTGATTTGGTGCAATTTGATTTCTTCAGCTTCCTGGATAAACTAAAG
TGAGTTTGCAACTTTTCTATACATTTATTTTCATGCGTTTTAAATCCCAC
TAAATTATTTGAGCCAAAACTTTAAGCAATTTTTTCGCACGGGTATAAAT
ActaagtttttttcttctaagtttttttGTACAATGATTTTATCAGCAGC
TGTTATTTCGAACACTTTCCATACTATTGTATTAAATCGGTTGATGGTTT
GATGTAATACTATTTCTGTAGTACGCCTGTACACTTTAATTTTACGATAA
ATAACTAAGAAGCTGATTAAGATAATACCTATGCCACCGTAAATGGCGTA
TAAAAGATCCATTTGATTTAGAATTTTATAAATGACAAAACAAGTAGTGA
AACTCGcgtgaacttttttttcaatgtaaaaaatttaaaaacataaaaaa
taagtttCCTATTTATACTTTTGTCGTAATACTGGCGAGTTTTATAGTTC
GGTGACTGTAAAATATACCTTTTCTTTGTACATTCCAATCGTTTCATTGG
TGTATGTAGATCTTATTTCGATGCGCGTATCTTTCACCAAAAATAGATAT
GTATTGATCCATAAATTACACGCCTTTGTACAAAAAGATGCGTTTTCAGT
AACGGAATCCACTAAATATGTTTATAAGGTTCTTTCTAAATCGTTTCTAA
CTTCTTATAAAACACcataaattttttataagaaaaatttgaacattttt
aaatgGGGACTTTTcttaaaatagtaaaaattaaAAGTCTAACCTTGAAA
AGAATCTACCCTTTCCTCTATCATCATtactatagacaatagaaaaaggt
gtaaaaaaaggattgggtcgagtttagggtggtaaaacggacaaaaaaat
acccgcgcggcaattggcagctacgATCGAAAATTTATTTGTGCAATGGA
TAAAGCTTTATTTATTGGTTTTAATTGTAGATACACACgagaaaatattg
ttttgaaaacgaaagagtGGATCATTGTCTCTATTGGTTTATTACTCATG
TAAGTAAAAGTTAATATTTTTATGAGGACATAGGCTTTgagacaaaaaat
atttaagtttgtTTAAATGTACGTGGACACTTTACTTTTTCTAACAATTT
CTCGGTATGCATTTTTGTGCTATATTAAATaaacaccgttggaaagatat
cacCAAGGAGAACGATCAAAAGATTAAAACAATTTGAACCAGTAGAAATa
tcttcttattttcatcttcacttttcaatttttcaagaatcTTTTATCTT
ATACAATATATTATATACTCATCGAAATGTTTAAAAAgtaaagtgtccac
atacttttgagataGACTTCAGAACATAATGCTTTTAGATGTCCAAATCA
TGCAATTCTTTTAGTAAATTGAaccaataagaacattttaggcctaaatt
taaaaaaaggctaagaacattcaaactttgaatactCTTCTTCAAACTGA
ATATGGACTTGAGAAATCAGGCTCGTCTCAATTTATGTTTCGGAAATTGG
AAACGGAACAAATAGAGTGATGAGGAAGTAATAATAGTgatttgtttctt
aaaatatatTGTACTGCTAAATgtattctgatttttttttgaagcgaaga
gcagaaaaaagttttctctGACGTTTGAGCTTTCGAGACTGGAAAGCATT
CTACTTTTTTGACAATTTATTCTCCTCTATTTTAAGCTATTCTGAAGGAT
GTCCAGAAATTTCCAAATCTTTTGATAAGAATGTGAATCATTTGAAACGA
TTCTTAACAGACAAATCTCTACCGGACCTTCAGTCAATCAAAAACATATG
TCCTTCCATAGCTACTAAAAAGACTGAGAGTGACAATATTGAGGATAATA
TTATTTACGTTAGCGAGGATATTGATTCCGATGATGGTAGTATATCGGAT
GAAGATGCTTATGGGGATAATATCTTTCCTCCAGACTCGAACACAGCAAC
TACGAATTATGAATGTGACTTATCGACTATTTGTGAATATGGAGGTGAAT
TTGAAGAATTGGATTAA Coding sequence (CDS) from alignment at sc0000128_pilon:549897..556663+ >XLOC_036951 ID=XLOC_036951|Name=XLOC_036951|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2076bp|location=Sequence derived from alignment at sc0000128_pilon:549897..556663+ (Clytia hemisphaerica_ch_hm2_pilon)
CTACATCGtgaagacaaagaagaagtaAGCTACATCGtgaagacaaagaa
gaagtaAGAGTTAATACAGATGGGCAATTTGAAGAACTCCCAGAACCCGA
AGAGAAGATAGTTAATACAGATGGGCAATTTGAAGAACTCCCAGAACCCG
AAGAGAAGATTCAAAGTACGAAAGAGACATATGATCGTTTCGATAAATTT
GAAAAGGCAGAAAAGAAGCAACCAACTTCACCAACCAAACAAAGTTCGCC
CTCCAAAAGAACTAATTCTGTCACTAAAACTATGGAAAATAAAGACCTTG
AAATGCTTGCAAGTTTAGAAAAAGCAAAGACTTTCTTGAACGAATGGATT
GAAGGCTACACAATAGGAGATTCCGCTACAAAACGTTCTAATACCaattc
aaccaatcaaattaatACAAATCAGCCACGTGATGAGAAAGAATTCCAAG
CAAAAGTGATGAATTTCTTATCCAAGAATCCTGATTGGTCGAACGAAGCA
ACTTTGTCTGAAAACTTTcaagagaaaatgaaagtgaagagcaataaggt
tTCAAAGTACGAAAGAGACATATGATCGTTTCGATAAATTTGAAAAGGCA
GAAAAGAAGCAACCAACTTCACCAACCAAACAAAGTTCGCCCTCCAAAAG
AACTAATTCTGTCACTAAAACTATGGAAAATAAAGACCTTGAAATGCTTG
CAAGTTTAGAAAAAGCAAAGACTTTCTTGAACGAATGGATTGAAGGCTAC
ACAATAGGAGATTCCGCTACAAAACGTTCTAATACCaattcaaccaatca
aattaatACAAATCAGCCACGTGATGAGAAAGAATTCCAAGCAAAAGTGA
TGAATTTCTTATCCAAGAATCCTGATTGGTCGAACGAAGCAACTTTGTCT
GAAAACTTTcaagagaaaatgaaagtgaagagcaataaggttGAAAAACC
ATACATGCCTCCTGTCGATTGGAAATCACAAGCTCTACTCAGGAAGAGAA
TTGTCAAAGAAAAGGTGGTTTCTAGGAAAAACCATACATGCCTCCTGTCG
ATTGGAAATCACAAGCTCTACTCAGGAAGAGAATTGTCAAAGAAAAGGTG
GTTTCTAGTTTAGACAAATTACAAGACATTCTCGAGTTGTCAAAGTCTGA
TTTGGTGCAATTTGATTTCTTCAGCTTCCTGGATAAACTAAATTTAGACA
AATTACAAGACATTCTCGAGTTGTCAAAGTCTGATTTGGTGCAATTTGAT
TTCTTCAGCTTCCTGGATAAACTAAAATACACACgagaaaatattgtttt
gaaaacgaaagagtGGATCATTGTCTCTATTGGTTTATTACTCATATACA
CACgagaaaatattgttttgaaaacgaaagagtGGATCATTGTCTCTATT
GGTTTATTACTCATCTATTCTGAAGGATGTCCAGAAATTTCCAAATCTTT
TGATAAGAATGTGAATCATTTGAAACGATTCTTAACAGACAAATCTCTAC
CGGACCTTCAGTCAATCAAAAACATATGTCCTTCCATAGCTACTAAAAAG
ACTGAGAGTGACAATATTGAGGATAATATTATTTACGTTAGCGAGGATAT
TGATTCCGATGATGGTAGTATATCGGATGAAGATGCTTATGGGGATAATA
TCTTTCCTCCAGACTCGAACACAGCAACTACGAATTATGAATGTGACTTA
TCGACTATTTGTGAATATGGAGGTGAATTTGAAGAATTGGATTAACTATT
CTGAAGGATGTCCAGAAATTTCCAAATCTTTTGATAAGAATGTGAATCAT
TTGAAACGATTCTTAACAGACAAATCTCTACCGGACCTTCAGTCAATCAA
AAACATATGTCCTTCCATAGCTACTAAAAAGACTGAGAGTGACAATATTG
AGGATAATATTATTTACGTTAGCGAGGATATTGATTCCGATGATGGTAGT
ATATCGGATGAAGATGCTTATGGGGATAATATCTTTCCTCCAGACTCGAA
CACAGCAACTACGAATTATGAATGTGACTTATCGACTATTTGTGAATATG
GAGGTGAATTTGAAGAATTGGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000128_pilon | genome | sc0000128_pilon:549897..556663 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 709-1038:6438 |
| Aaloc | 640-705:5682 |
| Aaloc | 556-636:4667 |
| Aaloc | 472-552:4045 |
| Aaloc | 82-471:2982 |
| Aaloc | 31-78:652 |
| Aaloc | 1-27:1 |
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