|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000026_pilon:665034..668755+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036888 ID=XLOC_036888|Name=XLOC_036888|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3722bp|location=Sequence derived from alignment at sc0000026_pilon:665034..668755+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGCAAATCCATGGGATTCAGAACCATCATTTATAAATCATGGAGG
TTTGAATCAAATCATATtaacaaacagaaaaatttgCTCTGATAAATCAT
CACATCCTAACAATGTAAGTAtcagcttctttttttttataagaacatcc
aaagtttttgaagtctttggatgttcttaactctttgagttttaagccta
aaaatgttcttaacatattcttattttgaccattttgtgaatgtttttga
ccattttccttaagaaatagggtgtttttgagtccacaaagtcttgaaat
gttcttaacttgttcttaacattttgaccagtgaagccttatgttcttat
atagcttgttcttattaaaaaaacgtgtaccaggGTCTCATCCCGTGAAA
TTATCAACCACAATTGGAGTTTATGACCGATTGAACTGCCTCTATGAGTG
CTATAAAATAGTGCATTTGGTCGGGGTGCTCCCAGATCTCTACTGGTGGT
ATCTAGTCAAAAATTGCGTGTGGCTCAACGCACCCCTTCCTCTGTAATGA
TTGATCACTAACCAGCACAAACGTTTGGGGTAAGGTTATTAAGGTGGGAG
TAAATTGTATTATATTTAGAATTAGAAAGCTGATTATCAGACAGGATGGT
CTCATATGTTGAGACCTGAAATATTAGGCTAAGCCTTAAATTTCTCATTA
CACTATTATTGTAAAATGATCTAAAATTTAGAATACATAACTTTCAGGAA
TCGTCAAACCATTCATCGGTTcattttatcaatgttttgaggGAACTGAC
ATCTCTGAACAAAGAGCAAGTGAAAGTTAGTGTATTTTATTGATTTGAGT
CTTCCAGGaaaaaaaaGAATGGGTAGTAGTGTATCAATTTAGAATTTAGA
TTTAAGGATATCAATTTATAAgctttttttaagatttctttcTGAAGAAG
TAAAAACTCCAAAAATGTTCAATATTTTCTCTACaaaaaaaTTcgcaaaa
gaacttttttttttgagtaaGTCGCCAGTTGACAAATTCTTCTACTCCCC
TTTTTGTCCGGTATCCTCGCAACATTCCCAGTTTTCTTTCTGGTTGATTT
CCTGATGAGTTTTTAGTTAAACCTTCAGAGGGGGTTGTTTTTATCCTTTT
CCATCCATTATTTTATGAAGTGAATCGATTACTGCACCAAGTCTTTTGCT
AATTCTGATCGTCCACACTCTTTTAGGTTTCGCTTGAATTGAAGCAAAGG
CAACTGCATCAAGAGTTCTTTAATATCCTGTCCACTGATGTTTTGGGTaa
acaatttttaagttttttgaaaaaaattaaacacaTCATAAACTCCTTTt
tcaaatacacgcttttttataagaaccagttaGTTCTGGCTGAAGGTCGG
ATTTTCTAATGTTATTTTGTGTTTTCCAgacttcagatgttcttaaggTA
ATTATGCTTGCTTTATCCactaaaagattaaaaaaataaatagtttTTGA
AGTCAACTTTCTCTGATTCGAACTCCTATTGTTCGGATCTTTCTGTTATT
TGAACTAAAACCACGTTCACTtgctacggttccgtttcgctccgaaacga
aatgaagccactctattggttagaagtgacgtaaaacttaaATTCAActa
atagaatggcttcatttgtGTGTGAACGTGGTCTAAATGGTTATTCCCCT
CAACTTTGCCGTATAGATTACTCTTCGTAATCCGAATCTTTCGATGATTC
GAAGAATTTTCTTGGCCCTTGAAGATCGTATTAGAGAAAATCAACACTGT
AttactattttatttttgttagaCGGTTTGATATCGATGGTTGATTTCTT
GTCAAGCCACATGCAGAATATCATTGATCAAAAAGAACAGATCATCCATC
ATCTCCATGAACCGTTCGTTGGTAAACCGCTGGCTATAGAAGCTGAATAT
CACAGGTTTGTTATGACTGCAGTGGgtttaaagatattcttattcCGTTA
TAAAGAAAGGAGGCACGCCTCTATGCTGGCAATGCAgaataaacaataga
atttctcaaaatttgtgttCGCGCGACTCGGAAGCACTGaactttatata
tccctggaccaagctatatctgccatctttgatcggagctCTTTTGAAAt
gggtacccgagaagaagccattgcaatgttgaaaattaacgtctgacggc
gctacatcatcaggtattcgaggaaaagtagatctagcaaTTGAGTTGTG
CTGCCATTAGGGtgccacttttcaaaaaactccgatcaaagattttgctt
ggctgggattgagaaacttggtccagggatatataaagggcAGTGCTTCC
AAGCTGTGTTAGAAAATGGTAGGAAATCTGATAAATGGTGTCCTTTAATA
ATGAAAATACCGTGTCACAAAATGGCACCATCCAATTTATAGGATATTTA
AGCTAAAATATCACACAAGCTTTATTAGCAAGAAGGCTAAGCCGCCTTTC
AAGACATGCCAAAAATTCTAATTCACATCCACACAAGTTTCTTCAATTTC
CTAGCCTTACTACCTGAAATTCTATCATTGAAATTTCACTGTTTGAAGGT
CTGTTTTCATTATTTGttctggtttgagatttttcaaatctaAGTGTTTA
GAAAATCCTCCCCCCTCTCCGAATGTGCATGTGATGCATGAAATGCATCC
AAAGAGAGAACTTCAGCCAGAGGTTTTTTGTGGAGAACTATCGGAAAAAT
AGATATTTCGTAAACGTAAAGTACTAGCGAGCGACAAACATGGTagaaca
ttttcaaatcttGTCCTCGCATTTGAAACTTGAATCCACTAATATTGGTT
ATATTACTTTTCAGTGATGTTTGCAAGTTTTTCCCCTTGATTGCAAAACA
ATTAGCGGAACTATCCTCAACCTTGAATAACATTGAATGGGTCAACAAAT
ACTCTGTTCAATCTTCCAATTTGGTAAgtagtattttttgaaattacagA
AATCTTTTTGGGAATTCCACTTTGTAGGtggcctatactagacgtccaCT
CGCGtttttttCTACGAATTTTTCATATGTTTGGAGCCAAGGTTTTCGTT
TTGAAGTCATTTTAAAACCTTCGAAACTCCTACAgttacaaaaaattgaa
tttgcgtCAATACACTAATGAAAAAGGCTTCTATTTggtcaaaaatcatc
aaagtggaactcacaaAGAAACGGAATTAAAATCctggtttttggtgagg
tgcttgCTACTCTGTTGGGGATAAACCTTTAGGGTCCATGACATCTCTTC
TAGGACGCAATCACATAAATTAATGTACTACAGGGTGTGCACCccaaaat
gcttttttttaatatttctgaaaaataaacGCGATTTTTGTAAACATGAG
TTACCTGTACACAGGAAAACATTTTACTAGTTTAGACTTGTGCCAAAACT
GCTCATATTCCTaaactattttttatttcaaattctatTGCCGTGCGTGt
caatgtcaaaataaaatttaccaccATTCTGGGCTGCACACCCTGTAATG
CAAGGAAATTTGaatgttgaaaaatattgaaatagtgAAGTCAAATTTTT
TGACCCAGGGATCAACGCTTGACGTAATCGGTCAATCTCTTATATCATTG
GAAAGACAATACAACAGCATCATAGAGGTCAGGGATGTTATGAATAAACG
ACTCAACATGTCCAGTAACTAA Coding sequence (CDS) from alignment at sc0000026_pilon:665034..668755+ >XLOC_036888 ID=XLOC_036888|Name=XLOC_036888|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1236bp|location=Sequence derived from alignment at sc0000026_pilon:665034..668755+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGCAAATCCATGGGATTCAGAACCATCATTTATAAATCATGGAGG
TTTGAATCAAATCATATtaacaaacagaaaaatttgCTCTGATAAATCAT
CACATCCTAACAATATGATGGCAAATCCATGGGATTCAGAACCATCATTT
ATAAATCATGGAGGTTTGAATCAAATCATATtaacaaacagaaaaatttg
CTCTGATAAATCATCACATCCTAACAATGAATCGTCAAACCATTCATCGG
TTcattttatcaatgttttgaggGAACTGACATCTCTGAACAAAGAGCAA
GTGAAAGAATCGTCAAACCATTCATCGGTTcattttatcaatgttttgag
gGAACTGACATCTCTGAACAAAGAGCAAGTGAAAGTTTCGCTTGAATTGA
AGCAAAGGCAACTGCATCAAGAGTTCTTTAATATCCTGTCCACTGATGTT
TTGGGTTTCGCTTGAATTGAAGCAAAGGCAACTGCATCAAGAGTTCTTTA
ATATCCTGTCCACTGATGTTTTGGaCGGTTTGATATCGATGGTTGATTTC
TTGTCAAGCCACATGCAGAATATCATTGATCAAAAAGAACAGATCATCCA
TCATCTCCATGAACCGTTCGTTGGTAAACCGCTGGCTATAGAAGCTGAAT
ATCACAGaCGGTTTGATATCGATGGTTGATTTCTTGTCAAGCCACATGCA
GAATATCATTGATCAAAAAGAACAGATCATCCATCATCTCCATGAACCGT
TCGTTGGTAAACCGCTGGCTATAGAAGCTGAATATCACAGTGATGTTTGC
AAGTTTTTCCCCTTGATTGCAAAACAATTAGCGGAACTATCCTCAACCTT
GAATAACATTGAATGGGTCAACAAATACTCTGTTCAATCTTCCAATTTGT
GATGTTTGCAAGTTTTTCCCCTTGATTGCAAAACAATTAGCGGAACTATC
CTCAACCTTGAATAACATTGAATGGGTCAACAAATACTCTGTTCAATCTT
CCAATTTGGGATCAACGCTTGACGTAATCGGTCAATCTCTTATATCATTG
GAAAGACAATACAACAGCATCATAGAGGTCAGGGATGTTATGAATAAACG
ACTCAACATGTCCAGTAACTAAGGATCAACGCTTGACGTAATCGGTCAAT
CTCTTATATCATTGGAAAGACAATACAACAGCATCATAGAGGTCAGGGAT
GTTATGAATAAACGACTCAACATGTCCAGTAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026_pilon | genome | sc0000026_pilon:665034..668755 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 505-618:3609 |
| Aaloc | 397-504:2866 |
| Aaloc | 265-393:1825 |
| Aaloc | 193-261:1227 |
| Aaloc | 115-192:748 |
| Aaloc | 1-114:1 |
|
