XLOC_036881 (mRNA) -

Overview


Name	XLOC_036881
Unique Name	XLOC_036881
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000007_pilon:2263204..2266634-
coding sequence from alignment at sc0000007_pilon:2263204..2266634-

mRNA from alignment at sc0000007_pilon:2263204..2266634-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_036881 ID=XLOC_036881|Name=XLOC_036881|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3431bp|location=Sequence derived from alignment at sc0000007_pilon:2263204..2266634- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGACCGGTTTCCTTTACGGCTCACACGGTAACAATACTCGAGGAAA
ATCTAAAAAGAAAACGTTAAAGGACTACAATCTTTACTTGAAAGAGACCA
GCAGCCAATCAGAAGATAATGTTGAAACAGAGAGTTTAATCAGTTTACGA
GAGGAGACCTCTGATCTCAGTTTTAGTGGTCACAATAAATTTGAAGATTC
TCATGTCGATGGTTATTTTCGACCACAGTTGAGATTAAAATCGCCCACTA
GACAATATCCTTCAATTGTGGGAGACGAGGAGAGAGAGAACGGTAAGTGT
GAAAAAATTGTTGAAGCAGATGGCTTTTCGACGTCGAGTTATTCCATTGG
GGGAGAAAAAGTAGTACTAAAGTATGTTAATAAAAAAAAGCAACTCAATT
AACCAACTATCAAACCAGTAGTCTTTATCATTTTGTTTCAGATGAAATGA
GAGAGAGGAGAAGAGACATCGAGGATGATCATAATGTTATTGACGGGGAA
GATTCTCAGACGCAGATGTTTTCTTCTACTGATTCGACAACAAAGATCAT
CATCAAAGAAACAAAAAGAAGAGGGATAAAAGAAGAACAAAAGGAAAGTG
TAGATGGGGGATTATTATTGAAAAAGAAGAAGAATAGAAATGAAGAATCA
GAATCAGAAGAAGAAGATGCTGATGAGAAAGAAAGAAACGAAGATGTGTT
ATTTTTCTCTTCTTGGTCTCCTTCTTCTTCTTCTTGTTCAACTTCAAAAA
CGACATTCACTACTAATAAACACAAAGAAGCAAAACGAACAGTAAGGAAT
AATACAAACAAACGTTACCGAACAATAACAAAGAATCAGAAAAAGAAGAG
TGAGCTTCTGTTAAAAAATAATCATCAAACTGAAGAAGAAGAAGAAAAAA
AAGACGTTCTCCTTCAACAACGACGACAACGAAAAGGAGAAAAAGAAGAA
ACAGGAGACTATTTAATTCAAACTAATAATATCAGTAATGGTAAAAATAG
TTTACAATCTTCTAGTAATCGTAAAAACATATCATCGACTGTTTTGACTC
GTCATCATCAAAAACCACAACAAACTTCTTCAAAGTTAAACAACAGTCGT
TCTCACCAAAAAGAATATTCTATATTTTCATTGAGTAGTCATAATAACAA
ACGAAAACGTAAAAGTTTTGGTGGATTTCGAAGGAAAAGTATGGAGGAAG
GAGCAGCTACATCATCTAACGAAGAAGAAAATACAATCATGTCTCCTCAA
CAACAGACAATACGTGCTGACCAATTCAACAAAATATGCCCATCACCTTT
TGATGACGTACCCGGCTTCCGTCGCTCGAACACGATGCAACACCGAAAAT
CTAAAAGAGATAGTCTGAACTCTAATTCAACAGCAGCTGTAGGTAGAATG
TCAAAATCTTTTAGTTTTGATTTATCCTCGTCGTCGAAAGTGCCAGGACC
GGTGGCTTTAGGTCGTGATAAATGGATCCAGTTTGAGGAGGATCGAGGTG
AAGAAAATATTTTTCAAGAGGAAGAGCATCAAATAAGTCCGGTATCTATC
CAATCACCACAGAAAATAGACTTTGAATTTTTCCCAGAATTGACTAGCGA
AACTGATCAAATGATTTTAGATTCTAATGTCGCCGAGAAAGATGTTGATT
CTGAAAACGAAGTGGATAAACTTAAAGAACAATCTACGGGAATCGCTACC
AGAAGTGTTGAAAACCTTTTAGAAACAGTCAACAAAACTGTGACTTTACT
CAAAGGTTCTATAACTAATCGAGAAATATCTGACCCTGACGAACGTAAAG
AGTTTGTTAACACTGATACTCCAGACGATTTGTCATCAATGATATCTGAC
GAAATTATCAGTCTTGAATTTGACACCGACGAGGAGAAATTTCGTGATAC
CCCCGTCAAGCAATTCCCAGACGTTTCTTTATTTCAAGTGTCAGTTGTTG
GTACGAATCGAGATAACTTGAGAATCGAACGCAAAAATAGTGATGATCAC
GTGACAAAGGATAACGGTAGTAATGATGTTTTGGATGAATATCCTCCAAC
CACTCAACGTAATAGTTGGAAATTATGGTACCGTTATCCGGATAAGAAAA
TGAAGATGGGACGACGTCGTAAATGGACACCCGTCATTGCTCACGTTGAG
AATAATTTTCTCAAATTGAATAGTCTGAACGGTTGTACGCCGGAAATTAA
GCGAGAGTATCCCTTACATCCATTCTGCAGTTTCACGGCGCCTACAATGC
ATAAAGGAAATAAAGACGGAAAAGTACACTCTGTTAAATTACAATACGTC
AAATATAAAGAAATAAGGCGTGTAAAACCAAGACTGGGTGTTGAGCACGT
CCCTGTTTTTACACCGGTTGTTAAACTATCGTGCCGTGACGTGATTGCGT
TACGTGATTTCATTAATCGTATTGAATCTGTGATCCGGCAGATACCAACG
TACCGTGATAAAGACATTTCTTACGAACGTGAGGAAATTTTTATAGATAG
CGAAGACGATTGTTCATACTTAGTGTCTGGGAGTGACGGTGTTGTCATAA
AATATAATATAACCGTTCAACTGAAACTTAGATGTTTTATATCTGGAAAT
CCAGAGTTGAAGTTGTTCCTAAATGACGTCAACAACCAAGATATTTTATC
GCGAACTAAGGAGGCATTGTCGAAAGAGAATAAACGAACCAATAATTGGA
TTGTACCAGAAAATTACGAATTTAACCCTTGTATTGATGTGAAAAAATCG
CAGGACGAAGGAGGCGTGGTTTTCACTCCACCTGATGGATGCAGTTTTGA
GCTTTTACGTTTTCGGTTAAGGAAGCGAAACCCCCTTCCTATTACCGTTA
AATCCAGTCTGGAAGTGTTAGCTTTAAAGTCGGTCCATTTGAAGGCAGAG
GTTCGAGTTAACGGCGACGGTAAAAGTATCCGGCATAAACGGAATAATGT
TATTTTGTATATACCAGTACCATCATCTTGGAGTAAACTGTTCTTAAAAT
CAAGACTTGTGGGTCGAATTGCCAAATATTTGAGTGTAAAATCATCTTTA
AAATCTCAACGTGTGTCTAGAGCTTCTAACGCACGTGCTTCTTTCGAGAT
AAGTACAGGGTGTGCAAGGTACGAACCAGCTTACGGTGCTATTATATGGG
AGTTGGGTAACTTGCCGATTATACGTGATGGTCTACCGGCAGACGCGACT
CATACTTTTCAATGTACTATCGAACTTCCTTTCCCGCTACATATAAGAGA
TGATTTTCAACCGTATTCTTATTTAGAATTTAACATCAAACAACAGATGG
GATCGAACGTTTCAGTTGAAGAGGTTTTACTTTCTGATGGGCGTGTCCCT
GAAAAATGGGTGTGTTATCGTTCGAATTTCACTTACAGAATTGAAATGCT
TATTTTGGAGGATGGAAAAGAAAGGACGTAA

Coding sequence (CDS) from alignment at sc0000007_pilon:2263204..2266634-

>XLOC_036881 ID=XLOC_036881|Name=XLOC_036881|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6564bp|location=Sequence derived from alignment at sc0000007_pilon:2263204..2266634- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGACCGGTTTCCTTTACGGCTCACACGGTAACAATACTCGAGGAAA
ATCTAAAAAGAAAACGTTAAAGGACTACAATCTTTACTTGAAAGAGACCA
GCAGCCAATCAGAAGATAATGTTGAAACAGAGAGTTTAATCAGTTTACGA
GAGGAGACCTCTGATCTCAGTTTTAGTGGTCACAATAAATTTGAAGATTC
TCATGTCGATGGTTATTTTCGACCACAGTTGAGATTAAAATCGCCCACTA
GACAATATCCTTCAATTGTGGGAGACGAGGAGAGAGAGAACGATGGCGAC
CGGTTTCCTTTACGGCTCACACGGTAACAATACTCGAGGAAAATCTAAAA
AGAAAACGTTAAAGGACTACAATCTTTACTTGAAAGAGACCAGCAGCCAA
TCAGAAGATAATGTTGAAACAGAGAGTTTAATCAGTTTACGAGAGGAGAC
CTCTGATCTCAGTTTTAGTGGTCACAATAAATTTGAAGATTCTCATGTCG
ATGGTTATTTTCGACCACAGTTGAGATTAAAATCGCCCACTAGACAATAT
CCTTCAATTGTGGGAGACGAGGAGAGAGAGAACGATGAAATGAGAGAGAG
GAGAAGAGACATCGAGGATGATCATAATGTTATTGACGGGGAAGATTCTC
AGACGCAGATGTTTTCTTCTACTGATTCGACAACAAAGATCATCATCAAA
GAAACAAAAAGAAGAGGGATAAAAGAAGAACAAAAGGAAAGTGTAGATGG
GGGATTATTATTGAAAAAGAAGAAGAATAGAAATGAAGAATCAGAATCAG
AAGAAGAAGATGCTGATGAGAAAGAAAGAAACGAAGATGTGTTATTTTTC
TCTTCTTGGTCTCCTTCTTCTTCTTCTTGTTCAACTTCAAAAACGACATT
CACTACTAATAAACACAAAGAAGCAAAACGAACAGTAAGGAATAATACAA
ACAAACGTTACCGAACAATAACAAAGAATCAGAAAAAGAAGAGTGAGCTT
CTGTTAAAAAATAATCATCAAACTGAAGAAGAAGAAGAAAAAAAAGACGT
TCTCCTTCAACAACGACGACAACGAAAAGGAGAAAAAGAAGAAACAGGAG
ACTATTTAATTCAAACTAATAATATCAGTAATGGTAAAAATAGTTTACAA
TCTTCTAGTAATCGTAAAAACATATCATCGACTGTTTTGACTCGTCATCA
TCAAAAACCACAACAAACTTCTTCAAAGTTAAACAACAGTCGTTCTCACC
AAAAAGAATATTCTATATTTTCATTGAGTAGTCATAATAACAAACGAAAA
CGTAAAAGTTTTGGTGGATTTCGAAGGAAAAGTATGGAGGAAGGAGCAGC
TACATCATCTAACGAAGAAGAAAATACAATCATGTCTCCTCAACAACAGA
CAATACGTGCTGACCAATTCAACAAAATATGCCCATCACCTTTTGATGAC
GTACCCGGCTTCCGTCGCTCGAACACGATGCAACACCGAAAATCTAAAAG
AGATAGTCTGAACTCTAATTCAACAGCAGCTGTAGGTAGAATGTCAAAAT
CTTTTAGTTTTGATTTATCCTCGTCGTCGAAAGTGCCAGGACCGGTGGCT
TTAGGTCGTGATAAATGGATCCAGTTTGAGGAGGATCGAGGTGAAGAAAA
TATTTTTCAAGAGGAAGAGCATCAAATAAGTCCGGTATCTATCCAATCAC
CACAGAAAATAGACTTTGAATTTTTCCCAGAATTGACTAGCGAAACTGAT
CAAATGATTTTAGATTCTAATGTCGCCGAGAAAGATGTTGATTCTGAAAA
CGAAGTGGATAAACTTAAAGAACAATCTACGGGAATCGCTACCAGAAGTG
TTGAAAACCTTTTAGAAACAGTCAACAAAACTGTGACTTTACTCAAAGGT
TCTATAACTAATCGAGAAATATCTGACCCTGACGAACGTAAAGAGTTTGT
TAACACTGATACTCCAGACGATTTGTCATCAATGATATCTGACGAAATTA
TCAGTCTTGAATTTGACACCGACGAGGAGAAATTTCGTGATACCCCCGTC
AAGCAATTCCCAGACGTTTCTTTATTTCAAGTGTCAGTTGTTGGTACGAA
TCGAGATAACTTGAGAATCGAACGCAAAAATAGTGATGATCACGTGACAA
AGGATAACGGTAGTAATGATGTTTTGGATGAATATCCTCCAACCACTCAA
CGTAATAGTTGGAAATTATGGTACCGTTATCCGGATAAGAAAATGAAGAT
GGGACGACGTCGTAAATGGACACCCGTCATTGCTCACGTTGAGAATAATT
TTCTCAAATTGAATAGTCTGAACGGTTGTACGCCGGAAATTAAGCGAGAG
TATCCCTTACATCCATTCTGCAGTTTCACGGCGCCTACAATGCATAAAGG
AAATAAAGACGGAAAAGTACACTCTGTTAAATTACAATACGTCAAATATA
AAGAAATAAGGCGTGTAAAACCAAGACTGGGTGTTGAGCACGTCCCTGTT
TTTACACCGGTTGTTAAACTATCGTGCCGTGACGTGATTGCGTTACGTGA
TTTCATTAATCGTATTGAATCTGTGATCCGGCAGATACCAACGTACCGTG
ATAAAGACATTTCTTACGAACGTGAGGAAATTTTTATAGATAGCGAAGAC
GATTGTTCATACTTAGTGTCTGGGAGTGACGGTGTTGTCATAAAATATAA
TATAACCGTTCAACTGAAACTTAGATGTTTTATATCTGGAAATCCAGAGT
TGAAGTTGTTCCTAAATGACGTCAACAACCAAGATATTTTATCGCGAACT
AAGGAGGCATTGTCGAAAGAGAATAAACGAACCAATAATTGGATTGTACC
AGAAAATTACGAATTTAACCCTTGTATTGATGTGAAAAAATCGCAGGACG
AAGGAGGCGTGGTTTTCACTCCACCTGATGGATGCAGTTTTGAGCTTTTA
CGTTTTCGGTTAAGGAAGCGAAACCCCCTTCCTATTACCGTTAAATCCAG
TCTGGAAGTGTTAGCTTTAAAGTCGGTCCATTTGAAGGCAGAGGTTCGAG
TTAACGGCGACGGTAAAAGTATCCGGCATAAACGGAATAATGTTATTTTG
TATATACCAGTACCATCATCTTGGAGTAAACTGTTCTTAAAATCAAGACT
TGTGGGTCGAATTGCCAAATATTTGAGTGTAAAATCATCTTTAAAATCTC
AACGTGTGTCTAGAGCTTCTAACGCACGTGCTTCTTTCGAGATAAGTACA
GGGTGTGCAAGGTACGAACCAGCTTACGGTGCTATTATATGGGAGTTGGG
TAACTTGCCGATTATACGTGATGGTCTACCGGCAGACGCGACTCATACTT
TTCAATGTACTATCGAACTTCCTTTCCCGCTACATATAAGAGATGATTTT
CAACCGTATTCTTATTTAGAATTTAACATCAAACAACAGATGGGATCGAA
CGTTTCAGTTGAAGAGGTTTTACTTTCTGATGGGCGTGTCCCTGAAAAAT
GGGTGTGTTATCGTTCGAATTTCACTTACAGAATTGAAATGCTTATTTTG
GAGGATGGAAAAGAAAGGACGTAAATGAAATGAGAGAGAGGAGAAGAGAC
ATCGAGGATGATCATAATGTTATTGACGGGGAAGATTCTCAGACGCAGAT
GTTTTCTTCTACTGATTCGACAACAAAGATCATCATCAAAGAAACAAAAA
GAAGAGGGATAAAAGAAGAACAAAAGGAAAGTGTAGATGGGGGATTATTA
TTGAAAAAGAAGAAGAATAGAAATGAAGAATCAGAATCAGAAGAAGAAGA
TGCTGATGAGAAAGAAAGAAACGAAGATGTGTTATTTTTCTCTTCTTGGT
CTCCTTCTTCTTCTTCTTGTTCAACTTCAAAAACGACATTCACTACTAAT
AAACACAAAGAAGCAAAACGAACAGTAAGGAATAATACAAACAAACGTTA
CCGAACAATAACAAAGAATCAGAAAAAGAAGAGTGAGCTTCTGTTAAAAA
ATAATCATCAAACTGAAGAAGAAGAAGAAAAAAAAGACGTTCTCCTTCAA
CAACGACGACAACGAAAAGGAGAAAAAGAAGAAACAGGAGACTATTTAAT
TCAAACTAATAATATCAGTAATGGTAAAAATAGTTTACAATCTTCTAGTA
ATCGTAAAAACATATCATCGACTGTTTTGACTCGTCATCATCAAAAACCA
CAACAAACTTCTTCAAAGTTAAACAACAGTCGTTCTCACCAAAAAGAATA
TTCTATATTTTCATTGAGTAGTCATAATAACAAACGAAAACGTAAAAGTT
TTGGTGGATTTCGAAGGAAAAGTATGGAGGAAGGAGCAGCTACATCATCT
AACGAAGAAGAAAATACAATCATGTCTCCTCAACAACAGACAATACGTGC
TGACCAATTCAACAAAATATGCCCATCACCTTTTGATGACGTACCCGGCT
TCCGTCGCTCGAACACGATGCAACACCGAAAATCTAAAAGAGATAGTCTG
AACTCTAATTCAACAGCAGCTGTAGGTAGAATGTCAAAATCTTTTAGTTT
TGATTTATCCTCGTCGTCGAAAGTGCCAGGACCGGTGGCTTTAGGTCGTG
ATAAATGGATCCAGTTTGAGGAGGATCGAGGTGAAGAAAATATTTTTCAA
GAGGAAGAGCATCAAATAAGTCCGGTATCTATCCAATCACCACAGAAAAT
AGACTTTGAATTTTTCCCAGAATTGACTAGCGAAACTGATCAAATGATTT
TAGATTCTAATGTCGCCGAGAAAGATGTTGATTCTGAAAACGAAGTGGAT
AAACTTAAAGAACAATCTACGGGAATCGCTACCAGAAGTGTTGAAAACCT
TTTAGAAACAGTCAACAAAACTGTGACTTTACTCAAAGGTTCTATAACTA
ATCGAGAAATATCTGACCCTGACGAACGTAAAGAGTTTGTTAACACTGAT
ACTCCAGACGATTTGTCATCAATGATATCTGACGAAATTATCAGTCTTGA
ATTTGACACCGACGAGGAGAAATTTCGTGATACCCCCGTCAAGCAATTCC
CAGACGTTTCTTTATTTCAAGTGTCAGTTGTTGGTACGAATCGAGATAAC
TTGAGAATCGAACGCAAAAATAGTGATGATCACGTGACAAAGGATAACGG
TAGTAATGATGTTTTGGATGAATATCCTCCAACCACTCAACGTAATAGTT
GGAAATTATGGTACCGTTATCCGGATAAGAAAATGAAGATGGGACGACGT
CGTAAATGGACACCCGTCATTGCTCACGTTGAGAATAATTTTCTCAAATT
GAATAGTCTGAACGGTTGTACGCCGGAAATTAAGCGAGAGTATCCCTTAC
ATCCATTCTGCAGTTTCACGGCGCCTACAATGCATAAAGGAAATAAAGAC
GGAAAAGTACACTCTGTTAAATTACAATACGTCAAATATAAAGAAATAAG
GCGTGTAAAACCAAGACTGGGTGTTGAGCACGTCCCTGTTTTTACACCGG
TTGTTAAACTATCGTGCCGTGACGTGATTGCGTTACGTGATTTCATTAAT
CGTATTGAATCTGTGATCCGGCAGATACCAACGTACCGTGATAAAGACAT
TTCTTACGAACGTGAGGAAATTTTTATAGATAGCGAAGACGATTGTTCAT
ACTTAGTGTCTGGGAGTGACGGTGTTGTCATAAAATATAATATAACCGTT
CAACTGAAACTTAGATGTTTTATATCTGGAAATCCAGAGTTGAAGTTGTT
CCTAAATGACGTCAACAACCAAGATATTTTATCGCGAACTAAGGAGGCAT
TGTCGAAAGAGAATAAACGAACCAATAATTGGATTGTACCAGAAAATTAC
GAATTTAACCCTTGTATTGATGTGAAAAAATCGCAGGACGAAGGAGGCGT
GGTTTTCACTCCACCTGATGGATGCAGTTTTGAGCTTTTACGTTTTCGGT
TAAGGAAGCGAAACCCCCTTCCTATTACCGTTAAATCCAGTCTGGAAGTG
TTAGCTTTAAAGTCGGTCCATTTGAAGGCAGAGGTTCGAGTTAACGGCGA
CGGTAAAAGTATCCGGCATAAACGGAATAATGTTATTTTGTATATACCAG
TACCATCATCTTGGAGTAAACTGTTCTTAAAATCAAGACTTGTGGGTCGA
ATTGCCAAATATTTGAGTGTAAAATCATCTTTAAAATCTCAACGTGTGTC
TAGAGCTTCTAACGCACGTGCTTCTTTCGAGATAAGTACAGGGTGTGCAA
GGTACGAACCAGCTTACGGTGCTATTATATGGGAGTTGGGTAACTTGCCG
ATTATACGTGATGGTCTACCGGCAGACGCGACTCATACTTTTCAATGTAC
TATCGAACTTCCTTTCCCGCTACATATAAGAGATGATTTTCAACCGTATT
CTTATTTAGAATTTAACATCAAACAACAGATGGGATCGAACGTTTCAGTT
GAAGAGGTTTTACTTTCTGATGGGCGTGTCCCTGAAAAATGGGTGTGTTA
TCGTTCGAATTTCACTTACAGAATTGAAATGCTTATTTTGGAGGATGGAA
AAGAAAGGACGTAA

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
XLOC_036881	XLOC_036881-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000007_pilon	genome	sc0000007_pilon:2263204..2266634 -

Properties


Property Name	Value
Aaloc	295-3282:2989
Aaloc	1-291:3432

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XLOC_036881 (mRNA) -