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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:1063345..1067611+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036875 ID=XLOC_036875|Name=XLOC_036875|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4267bp|location=Sequence derived from alignment at sc0000010_pilon:1063345..1067611+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGATAATACAATTGATTTTGAGAGACTTTTATTAGATGAAGAAGA
CCCTGATTCTGGGTTGGTAGAGGATGCATTTGATGTTTTACCGGATGAAC
TAACTTTACCTTTTGATTACGATGAGCTTGATTTAGATTTGAGTGAAGAG
AATTTCGGAAGATGTAGTACAAGTACAACAGATGACTTTTCTGATCTATT
AGAGCTTGATGGCAATCTTGATACAACGGCAGATGAGAATAACGATAATG
TTTTTTCTGAATCCTTTGATGATGATACAAAACTCGGTTTGAAAGATGAG
CAGAATGGTGTTTGTAATACACCAATATTAGAATCAAGTGCATTAAATTT
AATCCCCAATCAtgataatattgataaaaaggaAGATAACATTCATCTTT
CCAATCACCACAAGGACGAAGCAAAAGATTCTACTTCATCAAATGGGAAG
TtggtttctttttcaaaagagcAAGCCCGTCAATGGAGAAGGAAACGTAT
CTTAAATTCATGTCAGAAAAAGATTCCAGTTGTTGGATTAAAGGACTCAC
AAGGAGCATTATCTAAGCAATGTCCAATGAAACTAGAACCTTTGCTTCCC
CTCCCAAAAAACCTCAAACCAGTTTCGCAcaaaaaattcaatagtaaatc
aatttcaaatgatatcaaaattggtccaaaagaaaaattggcGAATCCAT
TGCTAGGAGGAGAAAGATTGGGTACTAAAACAAATCGTGGTAAGTTAAGT
TCTCTTATTTTAATAAATTATTAAAGGTATATACACTTCTATTTTTTGAG
TCTCAGAAAAGATGATTCTTTTATGAAGCAAGTAACTAATTCAActcttt
cttgaaaatttttggtgTAATAAACCAATCTTCAGTTCGCTGGTAAAGTG
GGTAAGCTTTATCAATAGAAAGATTTGCCCTCCAGCCGTACAGACATGAT
GATGAGAAGGGCGTTTTGCCCTCAAATTCAATTTTGCTTTGTAGGTTTAA
CTTGACTTGACTTTACTACTTAATCAggatttttttccattcaaacAAAG
TGATATTTTAGCACTACTAAAGATAAAACAGCAAATTATTATAATAAAGA
ATTCAGAAACTTTTTTCCTGCATGAGAATTAGAATGTTAGGAATTTGTGT
TATAAATAATTAATGACTTTAGAACCCCAAGTGTGAAAGTGAatataaaa
gtttttgattgtCTCCTTAGAACCATAGAACTCCTCATCACACTTGTTTT
GCTAAAATGgctttgaaaaaactaatgttaTTTTTGGCAAATTATATGAA
TACAAAACAAGattttggcaagaaatattttatttttttggcaatattaa
ttttcaatattttttctttttataataagtTACTTACTGTAACTGATTTT
ACTCTGATTCACCAAATTTTCACAAGTTTGAATTAGAATtagtatatttt
tcaaaaaatttgcatTTCTATTAAACATAAATGTCCGGAAATTTGCATGA
TGATATTGCAACTTGTgaaaaaaaacctaaaattttcaaaatagatttta
aagaaaaatcacttttatcgTTTTCCTGGGGGTGGGTATTAGCAGTGTGG
CTCGAATCcttcagatccttggttagaaaaagctatacctgtttcctttt
ttcttcccagattcaacaagccatcaaccaacaaaattaccaCTGACATC
TGAAAATTCACACAGCCTTTCCactagacacttctaaattatctgccatt
atgaagatgttccgaaattaaccaatcgggtttacaatcggaattcctct
gggagttagcgagtcgggaaatgtaaagttatgtaataggtaatacataa
tttttccgggggttaaacttataaataaaattgaaatggtttgttttttt
cttcattatatatttaagtttagattatcaaaattctagaaatgctagtt
tgtagaccatattacaaaatggttatatatttcgcaaaataaacacttac
aaaagctattacttactatttttacccccgctttttaaacaacgtcttct
gtgggcgtgatatcaggcggagacaaaacaccctcatcgtaagattctcg
ggtcgtcttattgtttgttccttttgtcgagtctgtcggtcctattgttc
atgctaaatccatacacgatgacgtcaatgtttggcggcatacctgaaaa
taaaaaacaaaaagattatcatattatttttgcatgaattacgctacctt
atacgtcattataaaattatacaaaacgaaagCCAGTCTAGGCCGCCCGC
CTAGTGCGCgggccctaatattttttctctcgcggtcttcaggggaaaac
gaaagtgatcgatattcttcgaaggaagaatttgccaaacaaacccctag
acaaaaagatgtattttgaggttgggaatggatcctgcgaagatgaaaaa
attttgactaggcgtttttttggcaaagccaaaaactctaatttttttct
tccctcaagctaaaaaggttacaggttttgggcaatcgaggcaaaaatca
gcaaaaagctggtattttccgtaaatctgagaatcgcgataagatcctca
ctgATTAGGGTCGCAGCTTGAAGGGTATGTCTGAGCCAAAGTTTGAAATT
GACCATTTTAGGGAATAGGAACCTTTATAGCTCGCATATATACCAGATAA
ATTTTTTAGATGATGCATACTATTAGCTTAGTTGAAAACAAACTTGGTAA
AAATATGATGACTTTTGTCAAAGAATTTTCGAATTCCCAAGGCAATAGAT
TAAAGTATTTTGTTATCAAAAGCAAAATAATAACAGCTATGCTATTTGCA
AAAGCAATGAAAGGTGACAAACTCTTTGTTTGGAACGCGTTATTTTATGA
AACTGTCAGAAACaataaattgttgttttgattgcCCGGGAAAATACTAG
AATCTAATTGGGTGCGATAAAGTGAGCCACAACAAAGATTTGTTTGCGAT
CAGGCGTCTGTATAAGTAtagtgaaaactttttgaatggAGGTTGAACAC
CACGCCTGACACTCTAGGCTAATACAGTAATGACAGGATAAGAAATGGTT
TTTGCCTCCAAATGTATTTTCTctctaatttttaaaacatttttctgcTT
AGGTCCAGTCCCAATGAAGTTAAGAGCATTACCGGAATCCTTTTGGAAAG
AGCCTGCAACAATACAAACAAGTCAGTTGGTTGGAAGCAGTTACGCTGTA
CTTCCACCTTTATTCTCAGCAGAGGCTAAAAACTCAGATGTCACAAACAT
TCGACCAGTTACACCGCCAGATGATAAGAAAAATTCCCCAAGACATTCAC
CACGTAGTAAAAAGAAAATCGTTGTTGCATCAAATGCAGATACTGAACTT
TTGTTTAGCTTATTTGATCATTTAGAGAGCAACAAAATTGATGAGAAATT
GATTGTTAGAAGGGGAAGGTAAGATTCACTCATTCCATCATTCTTCATTC
AATAAGCTATTACTTGCCACACTTTGCTTATCTGAAAGGCTTTTCTTGAC
GAGATGGTAGAAAATAATTGACTGATTTCAGAGGGATCGAACCAAAATAG
ACTTTTTACCTCGTTAATATTTAGATGCTTTGAGTAACATTCTTGCTTGA
TTATATCTGTACAGAGTTCCGTTTGAatcccctccccccccccaaaaaaa
aaaggttgaCCCAATGTATGATCAttattgggaaaaaaatttttttgtta
gaCAGTTCCAATTTATTACTGAGGGGAGAACAAAAAAGTACCGAAAATAA
ATGATAACGAATGATATTGGTCTTTAACATGATTCTCTCAAGGGAATACA
CTATAATTGATATTGCAGATgtccaaataaaaagaagtaTTCTTTAACCA
ATTCTAGTGAACCCATAGTCTGTATCGTGATATTATATAAATGGGATATA
GATTTATTAAGCACagataaaagttatattttagcaAGTGTcacatataa
tttttttgctctTTAAGACCGaaaaaaaGCACCAGCGACAAAGTCCCGCC
TCCTCCTTCACGCAGTATGGAAGAAGATCCTTGTATTGTCGATGATCTGG
CTAATAAGCTGTTTCCAGACCTGTCTCTTcaccaaaacaacaaatcagTC
ATTCCAAATTATGCAATGGTTCGTATAAACAAAGGTCATCACACGATTGA
ATTTCCAGCAGCAAAAGCCAATGAGAACTATCCAACTATACTGAATGAAT
TAGTGACTCATATGTAA Coding sequence (CDS) from alignment at sc0000010_pilon:1063345..1067611+ >XLOC_036875 ID=XLOC_036875|Name=XLOC_036875|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2610bp|location=Sequence derived from alignment at sc0000010_pilon:1063345..1067611+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGATAATACAATTGATTTTGAGAGACTTTTATTAGATGAAGAAGA
CCCTGATTCTGGGTTGGTAGAGGATGCATTTGATGTTTTACCGGATGAAC
TAACTTTACCTTTTGATTACGATGAGCTTGATTTAGATTTGAGTGAAGAG
AATTTCGGAAGATGTAGTACAAGTACAACAGATGACTTTTCTGATCTATT
AGAGCTTGATGGCAATCTTGATACAACGGCAGATGAGAATAACGATAATG
TTTTTTCTGAATCCTTTGATGATGATACAAAACTCGGTTTGAAAGATGAG
CAGAATGGTGTTTGTAATACACCAATATTAGAATCAAGTGCATTAAATTT
AATCCCCAATCAtgataatattgataaaaaggaAGATAACATTCATCTTT
CCAATCACCACAAGGACGAAGCAAAAGATTCTACTTCATCAAATGGGAAG
TtggtttctttttcaaaagagcAAGCCCGTCAATGGAGAAGGAAACGTAT
CTTAAATTCATGTCAGAAAAAGATTCCAGTTGTTGGATTAAAGGACTCAC
AAGGAGCATTATCTAAGCAATGTCCAATGAAACTAGAACCTTTGCTTCCC
CTCCCAAAAAACCTCAAACCAGTTTCGCAcaaaaaattcaatagtaaatc
aatttcaaatgatatcaaaattggtccaaaagaaaaattggcGAATCCAT
TGCTAGGAGGAGAAAGATTGGGTACTAAAACAAATCGTGATGACTGATAA
TACAATTGATTTTGAGAGACTTTTATTAGATGAAGAAGACCCTGATTCTG
GGTTGGTAGAGGATGCATTTGATGTTTTACCGGATGAACTAACTTTACCT
TTTGATTACGATGAGCTTGATTTAGATTTGAGTGAAGAGAATTTCGGAAG
ATGTAGTACAAGTACAACAGATGACTTTTCTGATCTATTAGAGCTTGATG
GCAATCTTGATACAACGGCAGATGAGAATAACGATAATGTTTTTTCTGAA
TCCTTTGATGATGATACAAAACTCGGTTTGAAAGATGAGCAGAATGGTGT
TTGTAATACACCAATATTAGAATCAAGTGCATTAAATTTAATCCCCAATC
AtgataatattgataaaaaggaAGATAACATTCATCTTTCCAATCACCAC
AAGGACGAAGCAAAAGATTCTACTTCATCAAATGGGAAGTtggtttcttt
ttcaaaagagcAAGCCCGTCAATGGAGAAGGAAACGTATCTTAAATTCAT
GTCAGAAAAAGATTCCAGTTGTTGGATTAAAGGACTCACAAGGAGCATTA
TCTAAGCAATGTCCAATGAAACTAGAACCTTTGCTTCCCCTCCCAAAAAA
CCTCAAACCAGTTTCGCAcaaaaaattcaatagtaaatcaatttcaaatg
atatcaaaattggtccaaaagaaaaattggcGAATCCATTGCTAGGAGGA
GAAAGATTGGGTACTAAAACAAATCGTGGTCCAGTCCCAATGAAGTTAAG
AGCATTACCGGAATCCTTTTGGAAAGAGCCTGCAACAATACAAACAAGTC
AGTTGGTTGGAAGCAGTTACGCTGTACTTCCACCTTTATTCTCAGCAGAG
GCTAAAAACTCAGATGTCACAAACATTCGACCAGTTACACCGCCAGATGA
TAAGAAAAATTCCCCAAGACATTCACCACGTAGTAAAAAGAAAATCGTTG
TTGCATCAAATGCAGATACTGAACTTTTGTTTAGCTTATTTGATCATTTA
GAGAGCAACAAAATTGATGAGAAATTGATTGTTAGAAGGGGAAGGTCCAG
TCCCAATGAAGTTAAGAGCATTACCGGAATCCTTTTGGAAAGAGCCTGCA
ACAATACAAACAAGTCAGTTGGTTGGAAGCAGTTACGCTGTACTTCCACC
TTTATTCTCAGCAGAGGCTAAAAACTCAGATGTCACAAACATTCGACCAG
TTACACCGCCAGATGATAAGAAAAATTCCCCAAGACATTCACCACGTAGT
AAAAAGAAAATCGTTGTTGCATCAAATGCAGATACTGAACTTTTGTTTAG
CTTATTTGATCATTTAGAGAGCAACAAAATTGATGAGAAATTGATTGTTA
GAAGGGGAAGACCGaaaaaaaGCACCAGCGACAAAGTCCCGCCTCCTCCT
TCACGCAGTATGGAAGAAGATCCTTGTATTGTCGATGATCTGGCTAATAA
GCTGTTTCCAGACCTGTCTCTTcaccaaaacaacaaatcagTCATTCCAA
ATTATGCAATGGTTCGTATAAACAAAGGTCATCACACGATTGAATTTCCA
GCAGCAAAAGCCAATGAGAACTATCCAACTATACTGAATGAATTAGTGAC
TCATATGTAAACCGaaaaaaaGCACCAGCGACAAAGTCCCGCCTCCTCCT
TCACGCAGTATGGAAGAAGATCCTTGTATTGTCGATGATCTGGCTAATAA
GCTGTTTCCAGACCTGTCTCTTcaccaaaacaacaaatcagTCATTCCAA
ATTATGCAATGGTTCGTATAAACAAAGGTCATCACACGATTGAATTTCCA
GCAGCAAAAGCCAATGAGAACTATCCAACTATACTGAATGAATTAGTGAC
TCATATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:1063345..1067611 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1057-1305:4019 |
| Aaloc | 742-1053:3155 |
| Aaloc | 1-738:1 |
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