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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000026_pilon:516710..522231- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036853 ID=XLOC_036853|Name=XLOC_036853|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5522bp|location=Sequence derived from alignment at sc0000026_pilon:516710..522231- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGAAGGACCTGAGCATTTCAAGGCAGCTGCTTTTATCAATAAACA
TTGTCAAGATAGATCTTTCACTGGGAAGATAGTAAAATCTGAAGTCAATC
ATCGTAATCCTGAAATTGATTGTCAATATGAGACTTACACAGTATCAGCA
AAAGCACGTGGAAAAGAAGTGATGGTTACGGTTACAAATCTAACATTAGA
TGAGAAGAAACAACAGTCCATAAAGAAAAAAGGAATTGTGAAACTTGAAC
CAGTTGAAAATAAATCAGAACATTTCAGCATTGTTTTTCGATTTGGAATG
TCTGGCTGCTTTAGGTTTACTGATGCAGATAATCTACCCAAGCATTCACA
TTTACGCTTTTTCAGTATTGATGGAATGGTTCTTTCATTTGAAGATGTTC
GCAGGTAAATAATATTAATTTTTACTGATATTTGTAAAATTCCGGCCTTA
CTAAAGTAATACAATTTACAGGAAGAAAGTCTAATTAATTCTCAAATAAT
TTTGTAAATAGCTTTATAAAGTTTCTTACTAAAGCCTTTTTCACATGTAC
GTCAAATTTTACTTAAGACCTTGAATAGTGGGGAATTTCCCTAAGCTAAC
GTAGTGTTTTAAGGCCTTATGTAGAGTTTGCTTACGTTCAAAAAGTTTTG
AACGGAAGGAAAAGTCACGTAAGACCCTCTTAATAACAAAAACTCTACAT
AATGTCGGGGAAATTCCCAAAAGACAGCCTTACAAACGATTTACCCTAAG
GTCTAAAGTAAAATTTTACGTGCATGTGAAAAAAGCTTAAAAGAGTAATT
TTTTAGTGACTTTTTTCCCTTTCATCTTAGATTTGGGAAATGGAAATTAA
CAGATACTTTTTCAGCAGACAGAGGACCTGACCCAGTTTATGAATACATT
GACTTTCGAAAAAATGTCCTCAACAACATCAAAAACCGAATATTTCAAAA
ATCTATCTGTGAGCTATTACATAATCAAAAATATTTCAATGGCATTGGGA
ATTATTTGAGAGCAGAAATCTTATACAGGTGAAACATTTTAAATCAAGAA
ATTTGCTAGGGCAATAAGATTTCTGATTATAATAGCTGTTACCTTTTTTT
GGTTTGGTTTAAGATTTGTTGAACCACGTGAAAAAGAATGTGGTTATTAA
ATTTTTCCCATAAATTAATTAATCCCATTAATTTTGTTGATTATTATAGA
TGTAAGATACCTCCGTTTACAAAATCATTTGATGTATTTGAAAACTTGGC
AATTGAAAAGGAAGAACCAAAGAGAAAAGCAAAGGTTGAGTTTTTTTGTT
CATGGGCCCCGGCGAGCCATTTTGAGTGAGGGGGCCAATATTTTGGAAAA
AAATGTCGCCCACCATGGTTGGGCGACGAAAATTTTTCGGTTTGTGTGGT
CTGATTTGGTCTCAAACCAGCTTAAAATAGTAACTCTTAAAAACGTATGA
CATAGTCTACCAAAAAGTGGGGGGCCATGGACCCCCCGGCCCCCCCGTTG
ACGGGGCCCATGTTGTTATATATGTTATTGTTCTATTCTTGATAAGCGAT
TATCGTAATTTGTTTATTCCAGTTTAACTTTTTCAGTCCAAAGCACCTTC
TTTGCTTCTTGCCGGACAGGGAGTGTATTTTTCACTGCTTTATGTTTCTA
CCTTGAAAGGCTGGGAATGATTTCAATTCAAAAAAGAGTAGTTTTGCCAT
ACAAAAGATTGCTTATCAATAGCAATCTTCTATCAAATGTCAGGCAAAAT
ATGAAACGCAAAAAATCTCTCTCTAACAAGGTTGATTTTAATAAATCCTT
CGGACTAAAAAAAGGGTTAAAAGTAAAGAAAGCTTTTAGCTCTAACCTGA
ATTTTAATTTTTTTTTTTGATTTATATTAACATTTCATTTTTTCTTCAGG
GAAATGATGGTGATTTTGACATTTTAGAATATTGTTCATTAGTTCCGTTT
GAGGTGATGGTGCTTGGTAAGAACTAACGAGTAACATTGCTTCTCGTTTG
ACTTTACTGAAGTTGTTATACTAGTATCCAGTGGCGTGGTGGCAGGGGGG
GCCAGGGGGGCCAGGCCCCCTCAGCGGAGCCCTTTTGAGAAGGGGCACCC
AAAAATAAGGAACGCCAAGAAGGATTTTTCAGGCGCCCATATCGAAAGAT
TGACAAATGAAAAAACAAAAATGGCGCCCCTCATCACCTCAAAATTTTCT
GGCTCGCTTCGCTCGCTCACTCCCTTTTTTGTGTTCATAATGAGCGTATA
GAGAGGGGCGCCAAAAACAAAAAATCTTTAAAAAGGGCGCCATATTTGCC
TTGGCCACCCCAGAGACATTTTCCCACCACGCCACTGCTAGTTTCATAGC
CCTGGGGGACAGCACTCGATTAAAAAACGACTGTAACTGCGGACCAAGAT
TAGGCGTTTGAAGTTGGAACCTTTGAGGAATTTCGGACAAAGATTTTAGG
AAATTCGGACAAAAATTTACCCTTAAGGTGTATTTTTTTTATCTTTTGAC
CATTTTAAGGCAAAATATGGTCAGATTAGCCAGATTTTACATCCTTATTA
AAGTGCACTTTTTCTTATCTTTGCTCATTTCAACCCTTTATGAAGCTTGG
AAAAATGACCCTTAAGGGCTGCACGTATGGTAGGTCATTTGCCTTGAGTG
CCCCCCCCCCCTGGGCATCATAATCAATTACAGTTATAGGATAGTTGATA
GAGTATAGAAAATCCTTAGCCCCCTTTTCTGTATCTTCACCTTCTCTCTC
TCATTCAGTTGCTTAGTACATTATTTTAAATTAGTAAGCCTCCTATTCTC
AACTTCAGTTGAGCTAGAATCTGAGAATGTCTGTGTGTGTGTGTGTGTGT
GTGTCTGTCACCAAAACTTTGGGGCAGGCTGGAGACTTAAAAAATGGTCC
GATTTGGCTGAAATTTTGCACACTTGATCCTTGGGCAAATCCCTGGGGGT
GTTTTTTTCATTTTTTCAAAATTTTGATTTTTGGGGCCTGGGGACGAGTT
TTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAA
TGGTCTGATTTGGCTGAAATTTTGCACACTTGATCCTTGGGCAAATCCCT
GGGGGTGATTTTTTCATTTTTTCAAAATTTTAATTTTTGGGGCCTGGGGA
CGAGTTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTT
AAAAAATGGTCCGATTTGGCTGAAATTTTGCACACTTGATCCTTGGGCAA
ATCCCTGGGGGTGTTTTTTTTCATTTTTTCAAAATTTTGATTTTTGGGGC
CTGGGGACGAGTTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTG
GAGACTTAAAAAATGGTCCGATTTGGCTGAAGTTTTGCACACTTGATCCT
TGGGCAAATCCCTGGGGGTGTTTTTTTCATTTTTTCAAAATTTTGATTTT
TGGGGCCTGGGGACGAGTTTTTCGCCTAAACGAGGCTAAAACCCAAAATG
CTATAATTTTTCTTAAGCCATTAAGTTTACAATTGGGCCTACGAATGATT
TCAAAGATACTGAAGTTGAGCCAGTGCGGTTAGCACGTTCGACAGTTATA
ATATATTAGGCAAATTCCATTAAAACCGATCTGAATATGCAATTTTTGTA
AAAAGTTTTCAAACTAAAAGTATAAGTTTATTGAAAAAAGTTGATAATCG
TTTATGTTGTTATTTTTCTCATAGAAGGTGGAGGCTATGATAAATCAGAA
AAGGATTCAGATTATTCACTTTTCGAAAACTGGTTACAGTGTTATTATAA
CAAGGACATGAACAACCTTGTAGACCATGATGGAAGAACAATGTGGTTTC
AGGTGATACCTTTTAGTAGCTCTTGTATTTCGATTAAAGATAATTTACCA
GTCGAAAAGAACAACACCTCTTATGTCAATATTTTGGCATCACATCTTCT
TCAAGATGATTGAGTTTATACATCAGAATTTAGTTTCCAAAGGCGTAGAA
TTTCAATATTACTGGTCTACTGTACTTTAAATATAGGAGTGTATTGTATT
CTAGAGTTTCGCCTGGAAGAGATGAAGCTGCTTCATCTTGAGTTTTACCA
TTAACGTTTTGCAGATTCTCAGAAATTTAATTGCAAGTTAACATTATTTT
CAATTTATGTATTTTTTGTATGTTTTCTTTTTTAGGGTGAACCAGGACCT
TTAGTTCCGACAGGTAAAGATATTTTATGGTGCTTTTTAGCATTTGCCCT
AAAATCATAATCAGTACAAAAAACCCTGGTCTTGAAGCTTATTGCTTTAA
CCTTTAATTAGATTTTTCCTTTGTCAATAACAAAAGATAAAAGTGGATTT
GCTCAGTTTTGGATCGTTACCAAATAAAAACACTCCTCTTGGGTTTGGCT
CAAAATTTAATCACATTTTGATTCTAAATTAAATCAAACTAAATCGGCAA
TGCAAGTTTAGGTTATAAACAATATAGAGGAAACAAACCATGACTTTTTC
TACGGACTTTTCTGAAATGAATTTAAAAAAGTCTTATTGATTTTTACTAA
AAGGAATGACTCGCAAATGGCTCGCATTTTTTGAAATTAAAAAAATCTAG
GTCTCATCTTAACTGTTTCTCATTGTATGAGAAGATAATTATTATCTACT
TGATCTCTTTTTAGGGGAGAAAGCCAAAGCTAGACATAATGCAAAGGTTA
TAGTAAGTTCAATATTGCATACTTGTAATTATAAATGATCAGAATATGTG
TTGCTTATGTGTTAAGGAAAAGCACTGATCTCTGACTACTTGACTAGATT
GGGCTTCATTTTCCCTTTATAATAGGAGGTGTGTAAAGCTTTCTTGAGCT
GATTAGTCTACCATGTTTCTTTACTTGTTGTCAAAAGTGGGATTCAAATG
TTTTTAAATTGAAACGTTTGAGAATGTGATGTAAAACAAAAGACAACATG
GCTGACAAGTCGACTTTAATACTGGATACACTTCCACAGGAATTTTGTAA
GCCCTTTTAGCCTATGTAGTGTGTAAAGGAATACGGTGAGTGAAAAGAAA
AAAAACGGTGGCTTGCTTCAAAAAGAAACAGACTATGATATAAACAACAT
CAGAGTTGATCTAAGCACTTTGAATTGTTTTTCACTATTTTCATACTTGA
TAGGTGCCTACAGAAGACAATAAAAAGAAGACAAAAGAAAAGAGCAAGAA
AAACACTAAGAAAAAGGCCGAGAGTAAAAGGTCCTTGACAAAAGGTCATG
TCCAGCCAAAGAAAAAGCTTGCACATGGACGTAAGAAAGGTAATATTAAG
AAGGAAGAAAATGCAGATCTTGTCGAAGAGTGTGATAACAAAGATTCCAG
CAAGACCCCCACATCTTTAAAAAGTACTAAGAAAAAAGGGCCTGGGAACC
GCAAGAGATCTATTAAGCACGAAAGAGGCAAGATTGAGGCTGCAGATGTT
GAAGTGAAAGATGAAAAAGTAATTAAAATTGATGATAGTCATTTACGAAG
AAGCTCTAGATTGAAGAAATGA Coding sequence (CDS) from alignment at sc0000026_pilon:516710..522231- >XLOC_036853 ID=XLOC_036853|Name=XLOC_036853|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2634bp|location=Sequence derived from alignment at sc0000026_pilon:516710..522231- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGAAGGACCTGAGCATTTCAAGGCAGCTGCTTTTATCAATAAACA
TTGTCAAGATAGATCTTTCACTGGGAAGATAGTAAAATCTGAAGTCAATC
ATCGTAATCCTGAAATTGATTGTCAATATGAGACTTACACAGTATCAGCA
AAAGCACGTGGAAAAGAAGTGATGGTTACGGTTACAAATCTAACATTAGA
TGAGAAGAAACAACAGTCCATAAAGAAAAAAGGAATTGTGAAACTTGAAC
CAGTTGAAAATAAATCAGAACATTTCAGCATTGTTTTTCGATTTGGAATG
TCTGGCTGCTTTAGGTTTACTGATGCAGATAATCTACCCAAGCATTCACA
TTTACGCTTTTTCAGTATTGATGGAATGGTTCTTTCATTTGAAGATGTTC
GCAGATGCCTGAAGGACCTGAGCATTTCAAGGCAGCTGCTTTTATCAATA
AACATTGTCAAGATAGATCTTTCACTGGGAAGATAGTAAAATCTGAAGTC
AATCATCGTAATCCTGAAATTGATTGTCAATATGAGACTTACACAGTATC
AGCAAAAGCACGTGGAAAAGAAGTGATGGTTACGGTTACAAATCTAACAT
TAGATGAGAAGAAACAACAGTCCATAAAGAAAAAAGGAATTGTGAAACTT
GAACCAGTTGAAAATAAATCAGAACATTTCAGCATTGTTTTTCGATTTGG
AATGTCTGGCTGCTTTAGGTTTACTGATGCAGATAATCTACCCAAGCATT
CACATTTACGCTTTTTCAGTATTGATGGAATGGTTCTTTCATTTGAAGAT
GTTCGCAGATTTGGGAAATGGAAATTAACAGATACTTTTTCAGCAGACAG
AGGACCTGACCCAGTTTATGAATACATTGACTTTCGAAAAAATGTCCTCA
ACAACATCAAAAACCGAATATTTCAAAAATCTATCTGTGAGCTATTACAT
AATCAAAAATATTTCAATGGCATTGGGAATTATTTGAGAGCAGAAATCTT
ATACAGATTTGGGAAATGGAAATTAACAGATACTTTTTCAGCAGACAGAG
GACCTGACCCAGTTTATGAATACATTGACTTTCGAAAAAATGTCCTCAAC
AACATCAAAAACCGAATATTTCAAAAATCTATCTGTGAGCTATTACATAA
TCAAAAATATTTCAATGGCATTGGGAATTATTTGAGAGCAGAAATCTTAT
ACAGATGTAAGATACCTCCGTTTACAAAATCATTTGATGTATTTGAAAAC
TTGGCAATTGAAAAGGAAGAACCAAAGAGAAAAGCAAAGATGTAAGATAC
CTCCGTTTACAAAATCATTTGATGTATTTGAAAACTTGGCAATTGAAAAG
GAAGAACCAAAGAGAAAAGCAAAGGGAAATGATGGTGATTTTGACATTTT
AGAATATTGTTCATTAGTTCCGTTTGAGGTGATGGTGCTTGGGAAATGAT
GGTGATTTTGACATTTTAGAATATTGTTCATTAGTTCCGTTTGAGGTGAT
GGTGCTTGAAGGTGGAGGCTATGATAAATCAGAAAAGGATTCAGATTATT
CACTTTTCGAAAACTGGTTACAGTGTTATTATAACAAGGACATGAACAAC
CTTGTAGACCATGATGGAAGAACAATGTGGTTTCAGAAGGTGGAGGCTAT
GATAAATCAGAAAAGGATTCAGATTATTCACTTTTCGAAAACTGGTTACA
GTGTTATTATAACAAGGACATGAACAACCTTGTAGACCATGATGGAAGAA
CAATGTGGTTTCAGGGTGAACCAGGACCTTTAGTTCCGACAGGGTGAACC
AGGACCTTTAGTTCCGACAGGGGAGAAAGCCAAAGCTAGACATAATGCAA
AGGTTATAGGGAGAAAGCCAAAGCTAGACATAATGCAAAGGTTATAGTGC
CTACAGAAGACAATAAAAAGAAGACAAAAGAAAAGAGCAAGAAAAACACT
AAGAAAAAGGCCGAGAGTAAAAGGTCCTTGACAAAAGGTCATGTCCAGCC
AAAGAAAAAGCTTGCACATGGACGTAAGAAAGGTAATATTAAGAAGGAAG
AAAATGCAGATCTTGTCGAAGAGTGTGATAACAAAGATTCCAGCAAGACC
CCCACATCTTTAAAAAGTACTAAGAAAAAAGGGCCTGGGAACCGCAAGAG
ATCTATTAAGCACGAAAGAGGCAAGATTGAGGCTGCAGATGTTGAAGTGA
AAGATGAAAAAGTAATTAAAATTGATGATAGTCATTTACGAAGAAGCTCT
AGATTGAAGAAATGAGTGCCTACAGAAGACAATAAAAAGAAGACAAAAGA
AAAGAGCAAGAAAAACACTAAGAAAAAGGCCGAGAGTAAAAGGTCCTTGA
CAAAAGGTCATGTCCAGCCAAAGAAAAAGCTTGCACATGGACGTAAGAAA
GGTAATATTAAGAAGGAAGAAAATGCAGATCTTGTCGAAGAGTGTGATAA
CAAAGATTCCAGCAAGACCCCCACATCTTTAAAAAGTACTAAGAAAAAAG
GGCCTGGGAACCGCAAGAGATCTATTAAGCACGAAAGAGGCAAGATTGAG
GCTGCAGATGTTGAAGTGAAAGATGAAAAAGTAATTAAAATTGATGATAG
TCATTTACGAAGAAGCTCTAGATTGAAGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026_pilon | genome | sc0000026_pilon:516710..522231 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 949-1317:370 |
| Aaloc | 913-948:857 |
| Aaloc | 883-909:1338 |
| Aaloc | 757-882:1797 |
| Aaloc | 688-753:3624 |
| Aaloc | 604-687:4323 |
| Aaloc | 406-600:4692 |
| Aaloc | 1-402:5523 |
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