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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:1000859..1005542- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036838 ID=XLOC_036838|Name=XLOC_036838|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4684bp|location=Sequence derived from alignment at sc0000010_pilon:1000859..1005542- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGAGCA
TGCGCGAGTGATGTTCGAATTGGCAGGAGCTGAATATGAATACAAAACAT
ATGTGTTCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATCGTTAGTGA
TTTCATCTTTTTGCCGCACAAGATTTTTCATGAGAATGATGTTTGTTCGT
TTCATCATGAATATTCTGAACTTTTTGAGTAGAATCATCCTAAATTACAC
ATTTTATTTTATAAGAACATCCAAAATTTTTGAAGCCTTTTTAACTTTAA
GTTCTTAAATGAGTTTTAAGACTAAAAATGTATTATTTCCACAATTTTTC
GAGTATTTTCGTCCATTTTGCTAAGAAATTGAGTGTTTTAGGGTCTACAA
AGCCTTAAAATGTTCTTAACTTGTTCTTTAGCAATATGTTCTTATATAGT
TTGTTCTTATAAAAAACGGTGTATTCTAATGATATTCTTAGTTAGGATCC
AAACTCAACCAATAAAAACATGTAATACGCATCTGAAGCATAAAATGGCA
TTTTTGTGAATGTATTGCGAGTCCTACTGTGAATTCGATTTGGAAGCATT
GCAGATTTTGAAAGTTTTGCAGAAATTTTCGCGAGCATAAACTTTCGCAA
ATCGCCTCTTTAAATATATTCGAAGACATTTACTTTCGCGCAAAAGGCCA
AAATTCGTGGAAATCGAGAAAGTTTCTGCTCGCGAAAGTTTGTACTGAAG
TACAGGCGAAATAATAATGATAATGTCAATCAGGCCCTTCAAAATAAACC
AATTATTATTCCGTAGGCGACAGCAAAAATCACTTGATATTTCTTTTAAA
CTTACAGCCAACCTGTTCCCACTTTCACAAGTTCCAACATTAGAAGTCGA
TGGTCAAGTTATTACACAGTCATATGCCATCAATAGATACTTAGCACATG
AGTTTGGATTTTATGGTGATTCGAATACTGAGAGAGTGCAAATTGATCAA
GTGGTAGAAACACTTGTTGAAATGTTCGCAGAAATGGCTCAGTTGATTTA
CATGGAACCAGATTTAGAGAAAAAGGTGTGAATGTTACTTTATTCTGACC
CGTTCAGTTGCAATGGGCTTTTCCAGAAATAAATTTTACCCCCACTGTCG
AGGATATTAATTTTTCGAAGTATTGAACCCCCTGGATATCCTACTTTATT
AGTAAAGACATCCACTCTTGAAAATATGCTCAACCCCCTGGATATCCTCT
CTTATAAGGATGCTTACCCCTTGATATCGTCTTTTTTACTTGAAAAGAAA
CTCTACCTCACGGATATCCGCTCCCTTGTAGATATTTAACCCCCTGAATA
TCCGATATCCTCAACGGGGGCACGGATTTTTTTCTGGATAAGTCCAATCT
TGGCACGAGCACTTTCAAATTCCTTGTCGGGTTTATAATATTAAAGCTTG
GAGAGGGGGGTTGGTACTTCGACAAAACAGGTGATGGGTATGTACGATTA
AGGTAACCTTTTTCATATCTCCAAAAGTCCCTCAAAGGGATAAAAATTAA
TAGGTTATCGTTTTACTTCGAATAAACGCCCCTCCAAATAAACCCCTTGG
AGGGGCGTTTATTTGATCCAGGTAGCAGTGAGGAAGTATAATATGAAAAA
AATCTAATTTTCGCATATTTACGCATATTATTCTCTTCCTTTCCAAAAAA
AAGCAAGCTTGAGTCATAATTTACACTTCTAAAATGGATAATGCATTTAA
GAGAGGGACCTGCCTACGAGAGAGTTGCAGAACATTTTATTTTATTTATT
TTATAAAACATTACCTGTTTCTATTGAAAAATGATGGTTCTTCTAATTGG
TAGTAAGTGGAAAAAAGCAAAAATCAGAGGATAAAATTTGATGAAAGATA
ACGAAAGACTTGTTAACAAATACCCAAAACATATTTTTATCTGAAATTTA
TCATGTTAACAGTTTGATTGAAAAACGACAAATGAAGTGCTTCATGTTGA
GGCGACGATTTTCTGAATTTTAGAAGGATTTTCTTGTGAATTGGGAAGTC
TGTTTCTTTGTTTACATTTTTCTATCTTCCTGTTTCTGTTTTGAAGAAAT
CAAACCTTCCTAAAACAGCAGATCTTCCGAATGAGGAAGAATTCTCTATC
TTCCCGTTTGAGTGCCGAAATATTTTCGAAACCTAATCGGGAAAATCTTC
CCGTTCGCTATCCTGAATAAATTACTCTTAACAGATAGTTACATACCATC
GTGCAAAGTAAACACGAGTGTTGGATTTTTTTTTCTCATTGATCCAACCT
TACGAGAAAAAAAATCTACAGAAACTTGGTAAATGAGTCCCTGACTCGAG
TCGCATCCATGAAAATCTTATTGAATTTGTATATGGATTGCATTTCTTGA
AAGTGAGATAAAGTAAATATCTATTGGCTGTGTCAACCAATATATCCCGT
ACTTAATTTATGACCAAAAACTGTCAATCTTTTCTTTGTAGTAGTATATT
TTGAATTAGCTTCCATCTCAACTACTTGTTTTTCCCCATGCAGTTTAAAT
ATTAGGCGAAATTTTCGACTTAAAAGTATCGTCTTGTTTACTTTTAGAAA
AGTGCATTGAGTGAATTCGCTGAAAAATTCCAAAAACATTTGAATTTCAT
CGAAAGATTTTTGAAGAACAATCCATCAGGTTATTTGGTTGGAAATAAGG
TATGTCTTACATTTTTTGAAAATAAAAGAATTTTTGTATTTCTTGGCTTA
CATGATTTTAATCGATCGGTCAGTTGGTTAGACGGGGCTAAACGATTCGT
CTTTAAAGAAACCCCTTTCTCACATCCCCGAAAGAACTTTTTCCCAAAGT
GGGGATAAAAATATCTAGCGAAATCACAATGGGTATATCATTCTATCTTT
CTAAGCTAAAAAATCCTTGTCCCACAGGAAATTTTGACCTAATTTTCCAG
TCGGACGGGGGTCCCACCGGTTCTGTGACACAAGGGTGTTTCACCCAAGA
GAGAAAATTGAGGACGTTCATCTAACGGTATTATTGAAGCGTTTGATGAA
CATTATTCTAGCTTTGTAGTAAAGTACTTATACCACTCTTCCTCTATGGA
TTTCCCCACTTACGTTTGATCCCTCTCTTAAACCCTATTAACCCCAACCT
TTTTTATTTTTGTAGCCCCAGGGGGGGTAGAATCTACCTCGATTATTTTT
GATCTAATAGAGCTATGACCATGAAAATTGGTACAGATATTCTCCATCAT
GACACAAACTTTCAGAAAGAAAAAAAATTTGACTTCCACCTGTCGGAAAA
AAGCAAAACTATATGGTTTACAAAAATGTCTCTCACAGTCGAAGCAATAA
AGATATTGAGATTCTGTTTGAAGATTCTGAAAGATAAAAGGTTCTTCTTT
AACATAATTGCCGGTTTTGTATTTCCCATTAAAACTTTATGCTGAAAATC
TATGCTGAGAATGAGTAAAATTTTCAAAATTTGATGACGTCATAAATAAT
GACGTCATCATTTTCATGATGTCATAAATGTCAAAGATTTTTTAAGTTTT
TTGAAATCAAATTGTTAATACCTATCACGTGTCAAAATTTGAATATGATT
GGATCAATACTTCAGAAATTATCGCAATTTTAAAATTTTGAGTTTTAAGC
GATTTTAGCTTGGTTTCACAATAAAGTCATGAGAGCTGACCTAGAAGACA
TATGACCCTAAAAATTTACACAATTACTCTTAATAAGATTTTATTAAAAG
TCAAAAAGTTTCAAGTCGTTTCAAAATTTTTACTCCGAAATATACACAAA
AGAACACAAGTGTGGTAGATTCTACCCCCCTGGGGCTAATAGGGTTAATA
GACCTTTTCATAAATTACGTCACTGACATCACTTGCCTCGTTTTAAAATT
ATTTGCATGGTGATTTACTCTAAGCGGATTTTATTGAATTAAACTACTAT
CTATTCATAAAAAAATTATTTAATGTCTCAAGGTATATATGTCCGTGACG
TAATTTATGAAAAGGTCAGAGAAGTACCAAGTACCATTTTGAACGGGTTT
TGCATTAAGTACAGAGTCTTTGGTATAAGCCGACCGGGGAGTGCATAGTT
TCTACCCCCTATATTTAGGGGGGTCTTGGGTTTTGACGAACCAAAAGCAA
GGGGGATGTTAAAAGTTGGACTTTCCTAATGAGGGGTTGCCAGTTAAGTA
GGGGTCTTCTTACCTAAGGGGGAGGGGGTCTTCTTAGATAAGGGGAAATT
TTCTTTGAATTATGACTCTTGTACAATCGTTTCATTTAAACTGATTTTCT
AAGGGAAGTGTCAAATTTTAAATGAATTTCCTAAGGGGGGTTAGCACTTA
AGGGGGGGGGGGTCCTCTTACCTAAGGGGGGATCTTGACCCCTCTAGAAA
CTATGTCGGAGTGAACCCATGACCCTGTACACCTTAACTGAATGCTCAAC
CTTTACACTACTGGTCGTTGACGTGGTACTACATACCTACTTTTACTTTT
ATTCATTTAGATCACTTTAGCAGATATTTGTCTATTCGTTTTCGGCGACA
TTGTCACTTTCCATTATCCAACCTTTTTTGATAACCAACCAGAAATCAAA
AAATTCATCAGCCGTTTTCATGAAATTGAACAAGTCAAAAATTATGTGGA
AAAGAAACGAACCCATAAAATGCATGTTTATTGA Coding sequence (CDS) from alignment at sc0000010_pilon:1000859..1005542- >XLOC_036838 ID=XLOC_036838|Name=XLOC_036838|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1272bp|location=Sequence derived from alignment at sc0000010_pilon:1000859..1005542- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGAGCA
TGCGCGAGTGATGTTCGAATTGGCAGGAGCTGAATATGAATACAAAACAT
ATGTGTTCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATCATGGTCAA
ATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGAGCATGCGCGAG
TGATGTTCGAATTGGCAGGAGCTGAATATGAATACAAAACATATGTGTTC
GGTGGTGAATGGAATGAAGCCAAGAAAAATCATCCCAACCTGTTCCCACT
TTCACAAGTTCCAACATTAGAAGTCGATGGTCAAGTTATTACACAGTCAT
ATGCCATCAATAGATACTTAGCACATGAGTTTGGATTTTATGGTGATTCG
AATACTGAGAGAGTGCAAATTGATCAAGTGGTAGAAACACTTGTTGAAAT
GTTCGCAGAAATGGCTCAGTTGATTTACATGGAACCAGATTTAGAGAAAA
AGCCAACCTGTTCCCACTTTCACAAGTTCCAACATTAGAAGTCGATGGTC
AAGTTATTACACAGTCATATGCCATCAATAGATACTTAGCACATGAGTTT
GGATTTTATGGTGATTCGAATACTGAGAGAGTGCAAATTGATCAAGTGGT
AGAAACACTTGTTGAAATGTTCGCAGAAATGGCTCAGTTGATTTACATGG
AACCAGATTTAGAGAAAAAGAAAAGTGCATTGAGTGAATTCGCTGAAAAA
TTCCAAAAACATTTGAATTTCATCGAAAGATTTTTGAAGAACAATCCATC
AGGTTATTTGGTTGGAAATAAGAAAAGTGCATTGAGTGAATTCGCTGAAA
AATTCCAAAAACATTTGAATTTCATCGAAAGATTTTTGAAGAACAATCCA
TCAGGTTATTTGGTTGGAAATAAGATCACTTTAGCAGATATTTGTCTATT
CGTTTTCGGCGACATTGTCACTTTCCATTATCCAACCTTTTTTGATAACC
AACCAGAAATCAAAAAATTCATCAGCCGTTTTCATGAAATTGAACAAGTC
AAAAATTATGTGGAAAAGAAACGAACCCATAAAATGCATGTTTATTGAAT
CACTTTAGCAGATATTTGTCTATTCGTTTTCGGCGACATTGTCACTTTCC
ATTATCCAACCTTTTTTGATAACCAACCAGAAATCAAAAAATTCATCAGC
CGTTTTCATGAAATTGAACAAGTCAAAAATTATGTGGAAAAGAAACGAAC
CCATAAAATGCATGTTTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:1000859..1005542 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 463-636:175 |
| Aaloc | 361-462:2088 |
| Aaloc | 145-360:3826 |
| Aaloc | 1-141:4685 |
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