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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:1083066..1088985- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036835 ID=XLOC_036835|Name=XLOC_036835|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5920bp|location=Sequence derived from alignment at sc0000010_pilon:1083066..1088985- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACTTATCAACTTAGGCCAATTTTTTAAATACAAACAGAATCTTCA
ATTGAATGTTAGATTGGTAAGGAATATAAACGATTTAAAACATAAAGCAT
TGAAAGTTGCTTTCTTTGGAACTGATGAATTTAGTTTAACACCATTGGAA
AAACTTGTTCAATTGAGGTGAGTTATTTATCATAAGTCTTCTTTTTTAGA
GTAATGTTTGTTTATTAATTTTGATGTTATTTTACATCAATGTTGGTGCA
GAATGTACCTTCATCTGAGTCAACCAATGTCATGTTAGAGGAATAAGGTA
CAACTACTCTGATATTCAAGGGTCTTTGGTGCGGTATGGACAGCTGTTAT
GTTCCAACTAAAAGAAATGCAGTATTTGTCCCATACATTTGATTTCTCAT
GAAAGTGTGTGCTTTACTGAGATATTACAATTTCTACTACAAACAAGTTC
TAGCCTCTTTAGCGCATCTCACTAACAAATTTATTTTTAGAAACGAAACA
AACCTTGTAGAGGAGGTCACAGTCGTTTCTCAATTTGAAACCCAAAAGGT
AACACATGAATTACAAACTTAAAATCCAATCAGTATCAGTACTTACTTTT
TTGCTTAATTTTCAAAGTAAATTTTTTTCAAAGTAAGAATTTTTCCCTCT
TTTATCCTCTTGTATATTGAATAAAATTTATTTATTATTTTTCTGGAGTA
GAAGAAGCAATACCTTGTATTGAAACTGATATGAAAACAAAATATGTAAA
ATCATCAAAATCCATAGATTATTTTCATTTTATCCATAGAAATCTACAAA
AGGCATTGTTCCAGTAGTTCATAGATATGTCAGAGAAAATGAACTACCAA
AAATTCATTGGGAAGAGTTGAAGATAAATCCAAAGTATGCTTTTTTTAAG
AGAAGCTAAATTTGGAAGGTCTAAATTGTCACTGAAATATACCCCAAATA
AGACATATCTTTTTCGTTATTAAACAGTCTTCCTCCACAACTAAGATCCC
CTTTTTGAACCCCTTGAGCTCGGCAAATGTAGGTGTCTTAAAATAGGGTT
TTCATATGGACCCCCTCGTCGTCGTCCGACCTTAACATGGATTTTTGAAA
AAGCCTAATTAAAATCCATCTCTTAAATGCTTTAATTAATTTTAAATACT
TTTTTTTAAGACATCATCTCGATCATGATTTGGCTATAGTTGCTTCTTTC
GGCGAATTCATCCCTTCAAAGGTTATCAAGTGTTTTCCAAAGTAAGTCTT
TAATGACAATTTCCTTTATTGTTCAAAATACCCTTTTGTACAGATGAAAT
TGTTTTTACATTATGTGAACAAAATGGGAGCTGAAGTTTTCATAATTCTT
TTCCATTCGCAAACTAGAGCTACCTGATAATGATATACAAGTAAAGCACA
ACATAGTTCCCTGCGCATTATCAGCTTTTTTATGCTTACTGATAGCGCTA
TTCTCTGGCGTCAACCAGTAACGTAAATAAAGCCTGGAATACACGGGGAT
GAGGTTCAGTGAAGCAATGAATCTGTTTGACTTTTGTTCTTGATTTATAT
GTTTGTTACTTTTGATTTCATGAAACTCATGTTTTATTACTATTGCAGGG
GTGCTATCAATATTCATCCTTCCTTACTACCACGATGGCGTGGAGCTTCA
CCATTGATCCATACTATTCTTGCCGGTGATACAATGACTGGAATTTCGTT
CATTGAAATTTCACCCAAAAAGTATGTATTTGTCTACTTTTAGAAGGGTA
CAACAAGCTGTTGATATTTTTCCAAAGAAGATTATATTGATTATTTACTA
AAGTGTCAAGGAAGTATTTTTTGGTTATATACAAAAAACTATCGTTTTCC
TTGTTGGTAATAACATCATCCCTTTCTATAAAAAGTCTTTTAAAGTCGTT
GTGTCAAGTGTTTGAGAAAAATCTGGAATTTTTCTGTGCTATTTTTTCTT
TTGATGAAATAATTTTGTTTCGATTTAGATTTGATATTGGAAGGATCCTC
TATCAAGCAAAGTTCCAGGTAGATCCTTAGTCCATTTGCTTTGAGTCTGC
ACGCTTTTTTTCTACCTTATGGAAACCATGCTATTACAATTTAACACATC
GTAGCAAAAACAAGTGTACATTTAAAATGAATAGCCATCATCGATATGCA
AATACTAAATACTTTTAGGGGGGATTATTCAATCCTCTATTTCAAACTTT
TAGGGTGAATTTCTAATTTCTGTATCTCTTCAGTTTATAGGATTTGTTTA
CCAATACACTCTTTTTTTATAAGCATACGGAAAATTGGGTTGAGGCTCAA
TTTGCTTAGCAAAATCTCATTTTCAGCCTTAATTTATGCTTTTTTATATG
CGTAGACTTTCTTGAAGATTCGTTAATTTTCTTTGGATTCATGGAAATTT
CAGGAATTTTCAAGTCGGAACATTGATTCAGCTCAAAGAATTAAAGTTTT
TTTTGTAATTTGGCACTGCAGGGAAAATCTTTGGTCTAAAAAGCTCAAAC
AGCTTTAAAAGTAACCCTAAAAGGTCCAGTGTTTTAGAAAAGCTACATGA
TTTTTTTGCATTTCAGCTTGGAGGTATGCTTAGCATTTTGCATATTATTT
TTGCTGAATTCGAGCGTAAGTATGCTTATTATAAACATGCTTATACAAGA
AAAAGTATGTAATGTTTTTGAAAAAAAATATGACATCTAATATCTTTTTC
ATATTTTATTTTTGCCAAATAATTAGATCCCACCTCGATGTACAACTGAA
AATTTGAGAGACATGTTATCAAATAAAGCTGCTGACTTGGTAAGAGAAGT
TCAATTTTGAGTATTTCACCAGTACTTAGGTTGCGATTTCAGACTTTTTA
TTTGTCCAAGAATATCAAATAAATTCAAGTTAAAGTCAGTTAAAGGTGTT
TTTGAATTAGGTATTATTGTTTTGATCATCCTACTTCGATTGAAATTTCA
ATGTGGTTCCAGTCCATACTTCGAAAAGACGGCCAAACGGTGTGCGTTTT
ATTAAGTTACAGTCGACGCTCTCTAATTCAATGTTCTACTATTCTTAGAT
TTATTGAAAGTCGCCGTTAGTAAGAAAGTCTCATAAACGACGCTCAACTA
TTCGATACGCTCTCTTTTTTGAAAAAAAATCTAATTCCCTTTGAAAATCA
GAGCGTTAACTGTATTATGATACTTTTTTTTTGGTTTTTGTAGCTACCAG
AAGTAATTGGCAATTTACCAACGTTGATGGAGAATTCAATTGACCAAGAT
GACTCCAAAACAACTCATGGTAAGGAAGATCATTATTGTGACCTCCCAAT
TTGAAGGGCTGGTCCACTTTTGGACACACGTGTTCACCCCATATCACGTT
AACTCGACTGGTTTTTACGCTGTTGTAGTAATCTAGAGGTAGGGTTATTT
TAAAAATTTTCTTGAAAATATACACAAGAAAAAACTTATATACAGCCGAT
AATTAGTGAGTGAAAATCAATTCAGAAAATAGTCGAAAAGTTGCACGGAC
CTGTAAAATCTCTTCGATGAATGAGTTTTTTTTGGGAAAACATTTCGGAA
GTAAGCGTATTATGATATTATAATATACCATGAGAATCATGAAAAGTGAT
TGTACTGTTTCGTGGTGAATAACGCTGGATTTGAATATTTCATTCACACT
AATCTGAAAAATCTGATAAACGGATTTCTCTCACTAGAAAGTCTCTGTAT
CTCTTTAAAATCAAAAAATTTAGTTTTTGTGATATGCAAACAATTTTTCT
ACTCATAGAAGTGGTCTGACACAAGACTTTTTTCAGTATATTTCCTTTTT
AATTTTAGCACCAAAAATATCAAAGACGGTGGGTTACATAAATTTTCATG
AACAATGTTGCGACGAAATCGAACGAACTTATCGAGCTGTTGGTCAACGG
GTAAGGATTCATGAAATTGGGCTTCATGGATACTTGAATGTCGTCATGCC
GAGAGCGAAATTTTGTGAAATTTTTAATGGAATTCGATTCCATGACAAAA
TATTCCATCCATTAATTTTTGCGAAACATAAAAAAATTCTTTTTTCAGAC
ATTCAACGAATTCGTTTTTCCGCAAAAAAGCTAAATTTTCTGAAATTAAA
ATGCTCTTGTGTGCTTCTTTATTAAGATATTAATTTTAATTAGGGATACT
TTTAGACAGCAGTGGCTGGAAATGCTTCCTGCCTCTGTGATTCGCAGCGC
TCCTAGATCCACTCCAGACCCACCTTAAAGGACTGAAAGAAATTGAGCAA
TCCCTTGTGATACCAATGGTACTTAACGGGTCAAATAACATTGTTTACAT
CTCGAAAAAACCAAGGGCTTTACCAGATTTAGTTTAATCTCTATGTTGTA
TTGAGATGAGAACTCAGTATAAAAATGACGAAGTGATTTAAACACACTCA
TACATAAAAAGGTGGGCGTTTTCGGCGGATACTTGGTTGTTTTTAAAGAT
AATCTTTTTGAATTAAATCTTTTATTTTAGGTTAGTATTAAATCATTATG
GGATGGAAAACAAGTAAAACTCGAGAATATTGTAGACATCAAAATGGAAA
ATGGTAATTTAAAGCTGATAAAATATTATTTCCACGAATGTTCGCAGTTT
TTCATCTCTGAAAAAAGCAACCAAACTTTCCCACTTTTTCTAATGGGCTT
GATTTATCACAGATTAGAAAAGTCTGCTGTTTGAATTTGATGACCGTTAG
TTTGTTTTGAAAATATTCATAAAAACAATATGGATGAACAATATGAATTT
TTCTTTCAGAGTCCGAAATAACACCAGGGACTTGCCAATATTCGAAAAAA
GAACGAATGATTTGGATAAAATGCAAGGTATGCATAGTGTGCAGAGGGGT
CTGATCCCCCCATTTATATTTCATCCCCCTATTTTAAAATATTTTCGAAC
CTGCACCAACTACAATGGTGGTTCACAAACCGTTTAATACCAAAAAATTC
AAATTTATATGGTAAGAAAGGGTATAAAATGGCGCCGCAGGCAAAAAAGT
TACCATTGACATTGCTATTTTGTTGGACTATACCCAATTCTTTGACCAAT
TTAAGATAATACATATTTTTAACAAAAAGCTGTTATCCCCCTATTTTTAT
TTATTACCCCCCCCCCTCAAAACTCAAATCCCCCATTTTACTCGGAAAAT
CTCTTATTTCTCCTATAAAGCCTATGAAAAGTTGGATCCCCCTTAAAGAA
GGGGTCACACTATGATGTTATGAAGTGTTTGGACAAAAAACGGAAAAGGT
TTTGTTTTAAAGAAAACAAGTATAAAATAAACTTGGAAAAGTTAAAGTCT
TTCACGTTCATTCAATAGAATTCTCAACCACTGTCGCAATCTTTTATTTT
TAAAGTCACTTCTGTTTTTCTGGAACTGTAAAGATGATACTTTAGGCGTA
CAAACTTTCGCGAGCAGAACCTTTCGCGAGGACGAAAAATCGCGAAATTC
ACGATATTTACTTTCGCGAATCAAGTCGTAAAATTTAGAATTTCCAATAA
ATATTTCTTGGATTGAATTGAAACATTTGTCCTTTGACTTTGTAGTCTTT
AACAGGCTAAAAAGTGCCATAAAAGTTACATTCTATTCAAAGTTTGAAGT
TTTAAAGATTTTCTATTTTGTCAAGAATTTTTCGCGAGCATAAACTTTCG
CGAATGGCCCTTCCTAGAATTTTTAAAGACATTTACTTTCGCGAAAAGGG
CCAAAATACGCGAAAATCGTGAAAGTTTCTGCTCGTGAAAGTTTGTACGC
CTAAAGTATTCGATTTTTTTTTACCATAGACTGGTTGGGTTGGTTTGGAT
AGATTTCAATTCGATCAACGAAAGAAAATAATCTCCGCTCAATCGTTTTA
CAATGGTTACGTCATTGATAAACAGACTGGAAAACCTGGAAGCACAAAGT
TCGAAACGATTGTTGAATGA Coding sequence (CDS) from alignment at sc0000010_pilon:1083066..1088985- >XLOC_036835 ID=XLOC_036835|Name=XLOC_036835|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2154bp|location=Sequence derived from alignment at sc0000010_pilon:1083066..1088985- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACTTATCAACTTAGGCCAATTTTTTAAATACAAACAGAATCTTCA
ATTGAATGTTAGATTGGTAAGGAATATAAACGATTTAAAACATAAAGCAT
TGAAAGTTGCTTTCTTTGGAACTGATGAATTTAGTTTAACACCATTGGAA
AAACTTGTTCAATTGAGATGAAACTTATCAACTTAGGCCAATTTTTTAAA
TACAAACAGAATCTTCAATTGAATGTTAGATTGGTAAGGAATATAAACGA
TTTAAAACATAAAGCATTGAAAGTTGCTTTCTTTGGAACTGATGAATTTA
GTTTAACACCATTGGAAAAACTTGTTCAATTGAGAAACGAAACAAACCTT
GTAGAGGAGGTCACAGTCGTTTCTCAATTTGAAACCCAAAAGAAACGAAA
CAAACCTTGTAGAGGAGGTCACAGTCGTTTCTCAATTTGAAACCCAAAAG
AAATCTACAAAAGGCATTGTTCCAGTAGTTCATAGATATGTCAGAGAAAA
TGAACTACCAAAAATTCATTGGGAAGAGTTGAAGATAAATCCAAAAAATC
TACAAAAGGCATTGTTCCAGTAGTTCATAGATATGTCAGAGAAAATGAAC
TACCAAAAATTCATTGGGAAGAGTTGAAGATAAATCCAAAACATCATCTC
GATCATGATTTGGCTATAGTTGCTTCTTTCGGCGAATTCATCCCTTCAAA
GGTTATCAAGTGTTTTCCAAAACATCATCTCGATCATGATTTGGCTATAG
TTGCTTCTTTCGGCGAATTCATCCCTTCAAAGGTTATCAAGTGTTTTCCA
AAGGGTGCTATCAATATTCATCCTTCCTTACTACCACGATGGCGTGGAGC
TTCACCATTGATCCATACTATTCTTGCCGGTGATACAATGACTGGAATTT
CGTTCATTGAAATTTCACCCAAAAAGGGTGCTATCAATATTCATCCTTCC
TTACTACCACGATGGCGTGGAGCTTCACCATTGATCCATACTATTCTTGC
CGGTGATACAATGACTGGAATTTCGTTCATTGAAATTTCACCCAAAAAAT
TTGATATTGGAAGGATCCTCTATCAAGCAAAGTTCCAGATTTGATATTGG
AAGGATCCTCTATCAAGCAAAGTTCCAGATCCCACCTCGATGTACAACTG
AAAATTTGAGAGACATGTTATCAAATAAAGCTGCTGACTTGATCCCACCT
CGATGTACAACTGAAAATTTGAGAGACATGTTATCAAATAAAGCTGCTGA
CTTGCTACCAGAAGTAATTGGCAATTTACCAACGTTGATGGAGAATTCAA
TTGACCAAGATGACTCCAAAACAACTCATGCTACCAGAAGTAATTGGCAA
TTTACCAACGTTGATGGAGAATTCAATTGACCAAGATGACTCCAAAACAA
CTCATGCACCAAAAATATCAAAGACGGTGGGTTACATAAATTTTCATGAA
CAATGTTGCGACGAAATCGAACGAACTTATCGAGCTGTTGGTCAACGGCA
CCAAAAATATCAAAGACGGTGGGTTACATAAATTTTCATGAACAATGTTG
CGACGAAATCGAACGAACTTATCGAGCTGTTGGTCAACGGGTTAGTATTA
AATCATTATGGGATGGAAAACAAGTAAAACTCGAGAATATTGTAGACATC
AAAATGGAAAATGGTTAGTATTAAATCATTATGGGATGGAAAACAAGTAA
AACTCGAGAATATTGTAGACATCAAAATGGAAAATGAGTCCGAAATAACA
CCAGGGACTTGCCAATATTCGAAAAAAGAACGAATGATTTGGATAAAATG
CAAGAGTCCGAAATAACACCAGGGACTTGCCAATATTCGAAAAAAGAACG
AATGATTTGGATAAAATGCAAGACTGGTTGGGTTGGTTTGGATAGATTTC
AATTCGATCAACGAAAGAAAATAATCTCCGCTCAATCGTTTTACAATGGT
TACGTCATTGATAAACAGACTGGAAAACCTGGAAGCACAAAGTTCGAAAC
GATTGTTGAATGAACTGGTTGGGTTGGTTTGGATAGATTTCAATTCGATC
AACGAAAGAAAATAATCTCCGCTCAATCGTTTTACAATGGTTACGTCATT
GATAAACAGACTGGAAAACCTGGAAGCACAAAGTTCGAAACGATTGTTGA
ATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:1083066..1088985 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 937-1077:142 |
| Aaloc | 871-936:1160 |
| Aaloc | 796-867:1441 |
| Aaloc | 706-795:2111 |
| Aaloc | 628-702:2728 |
| Aaloc | 565-627:3195 |
| Aaloc | 526-564:3942 |
| Aaloc | 403-522:4322 |
| Aaloc | 322-399:4760 |
| Aaloc | 226-318:5132 |
| Aaloc | 169-225:5430 |
| Aaloc | 1-165:5921 |
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