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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:691946..697676+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036823 ID=XLOC_036823|Name=XLOC_036823|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5731bp|location=Sequence derived from alignment at sc0000154_pilon:691946..697676+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGATCATGGTATTCAACCAACCACCATAATCAGTGAAGGCATGTATTC
CTGTTATTTTAAATgtcaaaatctgaatttttcCGCTTTTAttcgggaca
cactgtatactTTAGGAGTACAAACTTTTGCAAGCAgaaattttcgtgat
ttttgcgaattttcaGGAAAGTAAATGTCATTTTAAACTCTTAACAAGGA
TATTCGCAaaggtttattttcatttttatcctacgattcacgaaagttta
aaatgttttttcctcaaatttgcaaaagtaaaatgttgtagatttcaaaa
ttttacgatCGTGAAAGTTATTTCTGCTTGCGAGAGTTTGTGCGCCTAAA
ATAAATGCGATCTCTAATAAATTTCCCATGGGATTCTTtgcaaacttttt
cattttccagggggtatccacgcattttcaagaatttttttttgatttga
aaagtttCGTCTACTCTCCTAATATGAAAATTtcatggaatggcccaata
gaGGCCATAACAAGTGCCACATtctattatcaaaattttcctgAATAACC
CCAGCAGCACACAACActgtttcgacgtttatctaatgttaacaacgtcc
atataacgttagttgaacgtgttgaaacaacgttgtgtgccagctgggaa
cccTCCTCATTTACACtatattttcaatatatctTTCAGCACAAGAATTA
CATGCGAACAATTTACTTCTTTTCATTCCCATTCTTTCCACTGAATGGAG
TGTACAATTACAGTTCAAACTTCTTTCCGAGCATGCTGGTGGAAGATGGT
GTAATATTATGCATGTTACAAAGGGACAGAATAGGGATGTTTACGGAGAT
CGGGTACCAGCCATTTTCTTTGATAAGGTAAGCTTTTCTTTTAACATTTT
AGTATACTTAAAAACTTATACCTTAATATAAATGGAATTTGCACCCTCAC
TAAAATTAAGTTTCTTCAGGATTACCTTATTTTCTCTCAAGCGttaattt
ttagacaaaaaagaACCCATTGAACCTAATAAGTAGGTCAATGAGATTTT
AAGCTcgattttttgtaagaatttttctaaatcatGGTGCCATTTTCAAC
TTTCTCCCCATTTGCCCAactcgaaaaaaaagaagaagaaaccgGCAGCA
TCACGATGGAGCGCATGACGTCAGCTGCGCGGAAATTAACACGCTTGTAA
TTTGTTCATTATAGTAGGGCCGTGGGCGttttttttGACAGGCGCcttct
aattctccaatcgccGTCGGCCATTTtgaagtaaaacaaaaaattaaaaa
atagcaCGCTAAAAGCGAATTTTCATTTGTTATTGTCTCCTGGCCAAACT
TAATGTTAGATTAAGTGGGGATCAATTCTGCTCGTCAAATTAGTTATCAC
TTTAATTAGGTACTTTCATAAGATATTCTCTATCCTTATTTACTCTTGAC
AGACTGTATTTTTCATATAACCGTATAAGCTCGAAACCAGATTTATGCCG
GCATTCTTATGCCGTCtttagggacaagctggagtttttacaagatagaG
AAATGCTGAATTTTGCAGAACAGGATCAATTCATCCTTTGTTTCTACAAT
GTTTAAAATTACAAAGTTACAGTCATTGAAATACTGAATATAtcgaaatt
ctatcaaaaaaaataCACCATACTCAAGTCCcaaagtcccgaattgaaat
acatcaactttctgaaagAATTTTAAACTAACCCAAAGTCCCAAGGTCCC
AAAGTCCCGAAttgcaaaatatcgaaaatctattttaaaaaaatcacacc
atacctatgtcccgaagtcccgaattaaAATGCAtgaactttctgaaaaa
aatattacaccaacccaaagtcccgaggtcccgaagtcccgaatagCAAA
ATATCTAAAGtctgttaaaaaaaatcacatcaTACCTAAGTCTCGAAgac
ccgaagtcccgaattgaaatatatcaactttctgaaaaaaatattacacc
aacccaaagtcccgaggtcctGAAGTCCCGAATAGCAAAATATCGAAAgt
ctgtttaaaaaaatcacaccatacctatgtcccgaagtcccgaattgaaa
tgcATCAGCTTTCTGAATAaaatattacaccaacccaaagtcccgaatag
caaaatatcgaaaatctatttacaaaaaatcacaccatacctatgtcccg
aagtcccgaattgaagtatatcaactttctgaaaaaaattttacaccaac
ccaaagtcccgaagtcccgaagtcccgaatagcaaaatatcgaaaatctg
tttaaaaaaatcacatcATACttaagtcccgaagtcccgaagtcccgaat
tgaaatatatcgaaagtctatttaaaaaagattacatcatacctaagtcc
cgaggtcccgaagtcccgaggtcccgaagtcccgaggtcccgaagtcccg
aattgaaatacatcaactttctgaaaaaaaaattacaccaacccaaagtc
ccgaggtcccgaagccCCGAatagcaaaatatcaaaaatctgtaaaaaaa
aatcacaccataCCTATGTCCCGAgctcccgaagtcccgaattgaaataa
atcaaattcAGAGAAAATAAATACTACACCAACttaaagtcccgaggtcc
cgaagtcccgaatagcaaaatatcgaaaatctgtaaaaaaaaatcacacc
atacctatgtcccgaggtcccgaagtcccgaattgataTAAATCAAATTC
AGAGAAAATAAATACTACACCAACttaaagtcccgaggtcccgaagtccc
gaattgaaatatgtcaaaattctatcaaaaaaaaattacaccaacctaaa
gtcccaaggtcccgaagtcccgaatttcaataaatcaaatttcagaggaa
aaaaattgcacaaacctaaagtcccgaagtcccgaattgaaatatgtcaa
aattctatcaaaaaaaaattacaccaacctaaagtcccgaggtcccgaat
tCCCGAATagcaaaatatcgaaaatctgtaaaaaaaaatcacaccatacc
tatgtcccgaggtcccgaagtcccgaattgataTAAATCAAATTCAGAGA
AAATAAATACTACACCAACttaaagtcccgaggtcccgaagtcccgaatt
gaaatatgtcaaaattctatcaaaaaaaaattacaccaacctaaagtccc
gaggtcccgaagtcccgaatttcaataaatcaaatttcagaggaaaaaaa
ttgcacaaacctaaagtcccgaagtcccgaattgaaatatgtcaaaattc
tatcaaaaaaaattacatcaacctaaagtcccgaggtcccgaagtcccga
atttcaataaatcaaatttctgagagaaaaaaattacacaaacccaaagt
cccgaagtcccgaagtcccgaattgaaatatatcaattTTCTGAGAGAGA
AAGTTTCCACCCATGTCTCGTCTTAATTGATTTTTACCCCTACTCTTTTC
ATACTATCTCTGCCACCTCCCTTTACATCCATCTCACCCCTTTCTCACCC
TCCCTTTGCATCTATCTCACCCCTGTCTTCATGTATATATCTGTCCCCTC
TTTACGCGTCATCTCATCCTTATCTCGTGTTTCATCAATCATTTATTCAA
GCCCCTCTTTTTGCTTGAGTTTCATCCCACCCGTTTTCTTCTTTGTGTGA
ATATTTCACCCTTGCCTAATTCAACAATCCGATCTCCTGTCTCACCATGT
CTAATCTATCATTCTCTTTCTCCGGCCCTTTTTCAACTTTAGTTCCACCC
CAACCGTTTTCCTTCTTTGTGTGAAAATTTTATCCATGTCCATTTCATTA
atctcacccctgtctcactgtaTTCAATTTATCATTCATTGTCTCTGCCC
CTCTTTCACCCCACCccttttgatagatttccaaTCTTTCTTTATGTGAA
ATTCACTAAAGCCTCCCCTCTTTCCACTCGAGTTTCCCCCAACTTTATGT
GGAAATTACACCCTTGTCTATTTCATCAATCACCCCTGCCCAATCAAATT
TAATCAATCAGTCATTTCCCCCGGTCCTCTTTCTACTTGAGTTTTCATAT
TTCCATCGGGACTTCAGGACCTTGGGATTTTTGATTGGGGTAACtttttt
tCAGACTATACTTTGGTAAATTTCCATTCTGGACTTCGGGACTTTaggtt
ggtgtaattttttttctctgaatttgatttaatgaaattcgggacttcgg
gacctcgggactttaggtttgtgtaatttttttctcagaaatttgatata
tttcaattcggggcttcgggacctcgggactttcttgttgatgtaatttt
tttcttcataagttTGAtatttcgggacttcgggacctcgggactttagg
tgagtgtaaattttttttctgatagaATTTTGATATATTATAATTCGgaa
cttcgggacctcgggactttgggttagtgtaaaaaaatttttctgataga
aatttgatatatttccATTCGGttggtgaatttttttttttcagatagaA
TATCTCAACTTATTCTGTTTTTGCATTCTGTGAAATACACATCAAAAATC
ATGGCCGacgttgtaaaaactccagctcatccgcGTCTTTAGCGCTTTAG
ATAGCACGATTAAAAGAGCGAAAAACgtttaaattttaaacaaagtgaac
aaaataatttgaaaatgtgatttttttggTGCTTACTCTCAGGTTCCAAA
TAAATGCCCCTCCCCCGCTTgttaatcttttgaaaatttgccaacccccc
ccggaccttatgaggacccccccccgtttattaatttttaagaatgtttt
cagctttcaaaaaCAAGGTACTTTATTTCTCtttaaatagcctgatttta
gcattaccttatttttgagttttcgtaattacaatttccacccccccccc
cggtaattaggtccctaCCCCAGtctaaaaaaatttccaagccccccccc
cctgtttatttgaaCCAccttgtttatttggaacctaagagtaagtgcCA
TCAgtcatttctaaaaaaaattaagaaaattcgCTCCTTCAAGCTTTAAA
GGCTTAAGACTGCGCAGACTTGACTGAacgatggaaaggtgcccagtggt
aaaacttccattcaattcccaaaaaacagccaaaatttcaaaaaaatgga
tatttgtcaaatttttgcatttttttgactttttggcatAATACCTCGCT
AAAAAGACTCAGTTTTGAATTTCTTGACTATGAAGCACAATCCAATTTCT
ACgacttagataaaaaattacGATTTCTAATTCAAACTGGGTATTACAGG
AgagcttcgccctcctatatagcccatgtgaAATACACTTGACATGtaca
cggaaagggttaaatttcaaacaaaatattgttcttttttcaatttcagt
tcAATATGATAATTTCAATACAATCAGCAGTGAATGGCATTATAAGTTAT
AATGTTTTCCATACGATCCAATATAACACAGAATACAATATGGAGATTCA
CCAGAGATACAAAAGTGGAGGTGTTTACAAATATTCCATCCTTTTCGATG
GGGAAGAAATCCACTCAACCAATAATACACAAGCTCGACAATTTTATGGC
ATGGAAGTTTACATTTCCGATCCTTGGTATAACGCATGCATTGGTTTGGT
TAAAAATGTCAAGATCACTAACTTTctataa Coding sequence (CDS) from alignment at sc0000154_pilon:691946..697676+ >XLOC_036823 ID=XLOC_036823|Name=XLOC_036823|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1020bp|location=Sequence derived from alignment at sc0000154_pilon:691946..697676+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGATCATGGTATTCAACCAACCACCATAATCAGTGAAGAATGATCATG
GTATTCAACCAACCACCATAATCAGTGAAGCACAAGAATTACATGCGAAC
AATTTACTTCTTTTCATTCCCATTCTTTCCACTGAATGGAGTGTACAATT
ACAGTTCAAACTTCTTTCCGAGCATGCTGGTGGAAGATGGTGTAATATTA
TGCATGTTACAAAGGGACAGAATAGGGATGTTTACGGAGATCGGGTACCA
GCCATTTTCTTTGATAAGCACAAGAATTACATGCGAACAATTTACTTCTT
TTCATTCCCATTCTTTCCACTGAATGGAGTGTACAATTACAGTTCAAACT
TCTTTCCGAGCATGCTGGTGGAAGATGGTGTAATATTATGCATGTTACAA
AGGGACAGAATAGGGATGTTTACGGAGATCGGGTACCAGCCATTTTCTTT
GATAAGttcAATATGATAATTTCAATACAATCAGCAGTGAATGGCATTAT
AAGTTATAATGTTTTCCATACGATCCAATATAACACAGAATACAATATGG
AGATTCACCAGAGATACAAAAGTGGAGGTGTTTACAAATATTCCATCCTT
TTCGATGGGGAAGAAATCCACTCAACCAATAATACACAAGCTCGACAATT
TTATGGCATGGAAGTTTACATTTCCGATCCTTGGTATAACGCATGCATTG
GTTTGGTTAAAAATGTCAAGATCACTAACTTTctataattcAATATGATA
ATTTCAATACAATCAGCAGTGAATGGCATTATAAGTTATAATGTTTTCCA
TACGATCCAATATAACACAGAATACAATATGGAGATTCACCAGAGATACA
AAAGTGGAGGTGTTTACAAATATTCCATCCTTTTCGATGGGGAAGAAATC
CACTCAACCAATAATACACAAGCTCGACAATTTTATGGCATGGAAGTTTA
CATTTCCGATCCTTGGTATAACGCATGCATTGGTTTGGTTAAAAATGTCA
AGATCACTAACTTTctataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:691946..697676 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 229-510:5450 |
| Aaloc | 43-228:692 |
| Aaloc | 1-39:1 |
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