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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:658231..666281+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036821 ID=XLOC_036821|Name=XLOC_036821|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8051bp|location=Sequence derived from alignment at sc0000154_pilon:658231..666281+ (Clytia hemisphaerica_ch_hm2_pilon) TTGGGTGTTCTGTTCTATTCTGTTGAGAGTAGAGACAACAGAACGCGCAT
CGCCAAACGTTCAGCTAGCGTTTACAGCGTGGAAGGCTGCTTCAGGTAAG
ATACTTCTCCCGAGTCGcatttaaagcccgaagggctagatgtcgtgctt
tgacAGAAAAGTGTGTTGAGGCTagataggaaatcctacctaggtcacgt
gacattacacaAGATTTTCAAcacttgaccaataagaagcttcgcgggct
ttcaaaaacaatagcagcattttttgcgatatttttttttacttggaaga
tcttaaagcacgacatctagcccttcgggttttacagaaatctgtggtat
TATGTCATTACACGTACACCCCTTTATCAGTATTCTTGCTTTATCTTTGA
AGTAttactttttgccaccgcaggaagcctaaagcttccgaggatggcat
tcatagcttcactcgtgagggaaagttgggaaaacatctcataattttgc
gcgcgcgtttcagtattttagttccgcttagcggaacattatcaattaac
ggttatttgatttcccggaatgaagagcgataagccgtgttttacaggat
agctcttttttagcttgcgcggcggacgtttgtttcttcctatcgtgtcg
gagctttcaaacaatgtcaattgaattatctggtatttcttctattgact
atgtttcaaacgatcagccgatggctctggctttaggtataaggtaatgt
cagcgataaaaaaggaaagttggtggacctgatgtgatggtggcagacat
cttgaatttctccctgtttctttaaatctgttttattccagttattagca
cagtccagtagtccaatcgcactacttttctataaacccaacaatccagt
gtgagtttgctgaaaggaaaactaaacaatttgaatcctttttagacatt
gagattgatttatattttccagcgaaacagagcacagactgacagaacaa
cagtctgacagttatttatatagttttttccatcatcgttctaacactat
tgatacagaacagcacacagctgacaattaaaagaatttttgaaactgaa
ctaaagtataaaacaaggcgccctataaaagggaaattccataaaggaaa
gtttgcattttgcaaaaatctatatatacagtagttgacactctctaatt
caaatttcaagggattctcatcgaataccacagcatattgaatattgaga
aagtctcccaaatccctaaagtaaatattgaattatagagTAACACGGGA
AGAAGAAGGCGAAGCGAAGGTTGCTTATTGCGATTGGTTTTTGAACGTCG
AATCAGTACAATAACCGAAgatcttgctgaaaatttatataagttttttg
gaagaaatctttgatatttgcaatatttgaggagtcaaattttgagtttc
taatttgaacgcaacaaaatcgaacatttgaatttcaaaatatctggcat
tttttttgttactagaaatcaaataagagagtggtttttcaaaaccttta
aagtgacttcaaatttttatccaaaacgggcttatcaaatagtagaacgt
caaattagacagtgtcaactgtaattacattttttgctttttgctcctaa
aataatttgaagatttttcacagtatggcagaggaagactttgcgattaa
tctagacactgcattgaatgttgcacatttccgaaattcaagcaggacaa
ctggcagtcgtacctattcttgcgctgttgattgctttcttgaaatatgt
taccgcttgcttcttccagaaatgaaagctaaagtatcatatgaaaaatc
aagtgatttttttaagctgcttcaattaagtggatcaatggaaatttcac
ttgaagattacgatatgaaaagtaatgcttttcgactgctggatgaaatt
agggaaccggtatggtctaagattattgaaaaaattgtggtacctttgtg
agaagaaatagcgacgcagagtttcaagagatttttggaagtaatatttt
caaagaattatcagaagaagagagacatgtttttgaaacaagttttgtaA
TTCAGGGTACTTGTAATAGTTGTGGTAGTGAGAAGGAACAAAGAGAAACG
GGTAGCATTGTCAGTCTTCTTTCGCATTTTTTATATCCAGAGATTTTAGT
TGATGCAAGTTTGTGGCCAAACTGTGTATCAAATTCTCTTAATCCAAGCT
CAGAAATTAATTGTGATTCTTGCTCTGTCAACATACCAGCACAGATTCAA
GTTGTCAATTTGCCTATTTTTCTTCTTATAGAACTCTGTACAACAGTATG
TATAAAcaattgtagattttttgagGAGATTATAGTAAAAGAAAATAGCT
ACACATTACATGCCATTGTAAGGAATTGTGGTGCCCATTTTGCATGTGGT
ATATTTATTGAGAATAAATGGATTTACATTGAtgatttaaatcctgaaaa
aatttgttttcaaaacattaatgaaatgttttctgaaaacaaaGGAGGTT
GGTTTTTTGCCTTTTATAGAAAATCTGATTctgaaaaaattgactttgtt
atAGATACTACTAACCCTCTTAACACAGAATTGTCTATCAATAATGAAGA
AAATGAGATCaaaaaaaCATATCctaatcgaaagagaaatccaATAAACT
ATGAAGGTCTTTGCAGTACAAgcaacaaaaaaagtaaatttgatgattta
tttgagaaaatcaaccaaaaggttaaaattttgaaacgaaaggaagaaaa
taaaaaattttacgactcgcattctgtgaaaataaaagcaaattATGACC
ATGAAAAGCGAATAGCTCATTACAACCCTGAAAAGCGAAAGCTAGTGTAT
GATTCTAATAAGcgaaaagaacgatacaatccaaaagagcgaaaagaaag
atacaatccaaaacaacgaaaagaaatgtacaatttaaacaagcaaaaat
taaattcacagTCTGAAGAAAAGAAAGTCAACTACAATATATGtagtgaa
aatatgaaaaaatttcagcAGTCAATGAAGTTTATTATGGTTCAATGTCA
AACATGTTTTGAAACTTGGCCTATCAAAAGCACGTTAAAGTCAGTTTGTA
ATTTTAATTGTACTCGCTGCAAGAGAGATAAAGGGACTCCaaaaaaaTTC
AGTGCTGATAATAATATGAAACCAAGTCCTGTCCCAGAATCACTCAAAGG
TCTAACACAAATTGAAGAAATGCTTATAGCTAGAGCCTTTCCTGTAATGC
AAGTATACACCCGCCCAAGGGGAGGTCAGAGAGCTTATAAAGGTCATGTT
TTGAATCTGCCTCACAATGTACAAAAAATTGCAGATGTACTTCCAAGAGA
GCCCTCTGAAATTCCTATAgtgatttttaaaatgaatgGGAAAAATAATA
CCTCAAAGGAACTTGTTGTTCGACGTGAGAAAATTCTACAGGCATTATTG
TGGTTAACTGGTAAAAATGGACAAGGTGAACCTAACaactttttgccacc
gcaggaagcctaaagcttccgaggatggcattcatagcttcacgcataag
gaagttgggcaaacatctcataattttgcgcgcgtttttcagtattttag
ttccggttaaatggtgtaccggtaacattcttagcttgactgtatttcta
ttgttttatcatcattaaaaacacttttccggatttgttttgatctgatt
acccattttcaaagctctttatgtctttttttattacctcagggagtcga
attaagggaaattcccgtattaaaccacaagtagttattaaccgctctga
gcaacccaaattaaaaattttcaacctttcaaaaacttgtcgtttgactt
ttacattaaaatggcagtttagtacagtagcgtttagtatgatataaaca
aaccattatataccattattttggtaataaaagagataacaaaaaaaaaa
cagataaataactttatcttatctctataagaagatatctatgagatgga
cacaaattgctaatatttgtagactaaattttgcttcagatgagatgcca
ttctaacagaagtaacggctatcagtaacatttctttccaaattcaacaa
cttatcttctgcggtggcactttaatgaaaattatggctagtataATTAC
TGAGGCCTTAAGTTGCACCTTTCAACACGCCATCAAGTGAAATATTTGTT
CTcatcaagaaaatgaaaaactagcCTGAATCAATAGCCTAAATTTTTTC
CTTCTCATGTACCACACCAATTTTGAGCACAAGTCAAGAGCAGGAAAAAG
AGCCCCAATTACGCCTTCGCTCAAAAACAAATGGTGGCCTCATCACTTTT
TTCTAAATCTACCGATACttcaaaataaagatttaaGGAAAGCCTATTAA
ATATCATCAATCTATTTTTGGACTGAATTCTATTTTTATGCGATGGCGCA
ATAGAATATGTAAATGTGATTTATTTGGTAACAAATTTACCGTCAAACCG
AGTGTTCAAGGGCGTGAGCGTACCTATACGTATATACCTACCtagaattt
ttgactgaagatcgtgacgaaaagttgcgtgaaactttgagtatcaaaca
attcttatctcaacttcaatttattgtgtACGTATATACCtataaatttt
ttcatttactgTAAGGTCCCGAACAAACGCAAACTCCCCAGTTACTAATT
GCTCTAGATAGCTTGGTTTTGGTATATAATTATGGTTGGGGTTTTGAGAG
GTAAAATGTTCGACATCCTAATAgtaagctagacgactaattcaaacata
gtagaaataaagcaaaaacgTAGGTAGGACAtctttatttttccaaacag
tttgggaattgaaaaaagcgtcaaaaatcgatgttggaaattacatttta
gtGAAATTTAGACTCCTCCTTGGAAAACTAgattttttgggtcggaaaat
gtgtttctccaaacagtctggaaaacgttaaaaattcaTGTAGAAATAAC
AGAGAGATTGACCgagagccatcgagcctaggctagcgagtgactgttca
caaaaacaaaaaccttgtttaattaagatctctttttccacatctctgtc
atcactttttggattcaacctggatttttgaaaattccaaccttttttag
ttttgattttggctttattcaacctggatttttgaaaattccaagtttgt
ttactttggaTTGTAgctttttcaacctggatttttgaaaattccaagcc
atggaaaatgcaaaatttccattCTTGGAGAGTGTCCCAAGtttccaggt
tggattttccattggattttttctattttccaactaagaaatcttgaaat
ttctattaataccttggaaatcgaaaattttttcctgtgataatcgtatt
atcatatgacgcctatactactgtattacacgctaAGTTTCCTTCTTCAC
TGATGGGATACTGATTAAGTATTATTCGTGATATAAAGCTCAAACTCATT
TTCTTTGCCAGGATGTTTCCACCGGGTTCTTTGGATTCATCAGACATGGG
AATTCATCAAAGTTCCAATATCAGATGTCAAGAAATTTGTCGTGATAAAG
GATATGTGCTCGCCGCTACTAAAGGTAAAACGTTGATTATTTAAGTCTTA
TATCACACTTAAACTTCATGGTCTCAGGGGGATATCCAGAAAGGTATTCT
agcatgaaacaaaaaaatgattatCATATAATTCACATTGACCCTTTTAG
AACCCTTTTTTGAGACTTAGTGATTTTGATAATCTGCCAGGGATTTTCAG
ATAAGTTGGTATTTCCATTAACCCAATTTTACAGAAGTGCTCCCCAAGAC
CCTACAGAGGTACAGTAATCGATGAAATTGTACATGTATACAGTACTTGT
ATGATAACATACGTCTTACGAACTTTGAATTACTTACAGGTCAGATGTGT
CATTGTTCGAATATTTATCCACGAGGaaaaaaaGTAGTCGATCAAGAATG
TTCTACAAGATGTCGTTCATATACACCATGTCATGATGTCCAGAGCTGTT
GTGGAGGTCCCAACGCATACTCTGTTAGCGTGGTAGGAGATATTGACGTG
GCCAAACAAACGTTGAGAAGACTGGCCAATAAATGGCAAACGAATGTGGG
ATATCATAATTCAATGTTGAGACATGTTGGATTACTTTACGATGCTGATT
GGAGATCTTCTATTGAGAATGGAGGTTTGAGTTTTATTAAAAGCATTCTT
TTCCAGCTggaacacaacgttgtttcaacgtttatctaacattcacaacg
tccatataacgttaaatgaacgttgaaacaacgttgtgtgccagctggga
ttatttaaataaaattttcaaaatttaaaatcataatGTTTGCTGCTGAT
GTCttcaagtttctttttaaaataaaagaatcgACTTTGTTACTAATAGA
CAAATATTTGATTCAAGTTTGAAGGAAGTTAGATGTTATCAATACTgaag
aaattaaatttcttaGTTTTGATGACTTCCTCAAtcagattttcgcaaaa
atgcGGATAAATAACAACTAGGGTATACACCCAAGGATTTGCATCAAATT
ACTCTTCATTTTCAGTCTATTATTTGCTCATTTTCTGTTGTGTTCTAAAA
CTTATGGTAATATTCACGTTTTTGAGACATACCATAAATTAATCAAGCTA
CATTTAGTTAAATAGCAATAATACCAAGTCAActgaaatttttacatttt
tcaggcTGGTCGAAATGCAATAAGGAACATTACATCAATGGACTATCAAG
AGAAAACCAATACAGTGGATCGTCGTCAGATCCTCTTGGAAGAATCGATT
ATGCAAGTTGCCAAAAGGAGCCTGGAGATCAAGTTTGCAACTATCAATTC
GCTTTTCTTTTCACCAGTGGAACGGTTtggaaaacttgtaaacaagGATA
CTTTATGTCTGGTGTCTTCACTCAACCAGGGGCTCAAAAAATCTCCGATC
TTGCCCAATTCCATTGTTGCCGACccaagaaacaaaaagaacaatGGGGA
CATTGTTATAATCACGATGTATCTTCATCCTTAGATAATAAGGGTTGGTC
TACATGTCGATCTGGATATTTCATGGCTGGAATGGAACGAGGTTATTGTG
ATGGTTTACACTGcgtcaatcaaatcaaatgttGTCAAATGGAAAGCCTG
GCTGTCAGTGAAAACCCAAAACTGTCCATCAAGCTCAAGGACACCACAAA
CAAAGGACAATTGAAAGAATGCACCATGGAAGCAAGAGATCTTACACCTG
AAAGTAAAACCTATGAATGCAAATCTCTCAGTAATTTGAAAGATGTGGCA
AGTTTGGAATCTGTATCTTTCAAGATGGAAGACGAATCAGATCCTTTGAC
TTCGAAACCCGAACGTGTCAAAAATTATATCCCTGTTATCTGTATGCCAG
CTTCTTCAGACTACGAGTGCAAGAAAGTCTTAGCTGTTTCAGTGGCACAA
TCCAGTACTTTGACTATCGGCTCTGGCTTTTCCATGACCACGACATTTGG
TGTGAAAACAGCTTTCGAAGCGAATTGGTTTGGGCAGAAATTCAAGAATG
AAATCTCATTTGAATTATCAGCATCTTCTTCTCTCAATATTGGTACAAGT
AAAACAACAACCAAAACGGTAACCGATACAACATGGGTGACCGTTAAGGT
TCCAGCTAACCAGCAAGTTATGATTGATCTCCTTCGACAGAAAATCGACA
TCGTTTACAAATGGAGTGGCGTTTTTCGTCTTCTTGGTAAATACAAAATG
AATTGGCAGACAGCAAAGAAAGAAGAAACGAAACAAGATATCACAACAGT
ATTGAGTGGTCCTGATCGTGAGATGTATGCTTTCGGTAAATGGAAATATC
CCAATACTGACGTCTTACAAGTCGTGGTGACTGATAAATATGGTGAGAAG
AAAGGATGTGAACATGCAACAGGTGTTGATAAAAACTGTCTCATTGAttg
a Coding sequence (CDS) from alignment at sc0000154_pilon:658231..666281+ >XLOC_036821 ID=XLOC_036821|Name=XLOC_036821|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3480bp|location=Sequence derived from alignment at sc0000154_pilon:658231..666281+ (Clytia hemisphaerica_ch_hm2_pilon) TTGGGTGTTCTGTTCTATTCTGTTGAGAGTAGAGACAACAGAACGCGCAT CGCCAAACGTTCAGCTAGCGTTTACAGCGTGGAAGGCTGCTTCAGTTGGG TGTTCTGTTCTATTCTGTTGAGAGTAGAGACAACAGAACGCGCATCGCCA AACGTTCAGCTAGCGTTTACAGCGTGGAAGGCTGCTTCAGGATGTTTCCA CCGGGTTCTTTGGATTCATCAGACATGGGAATTCATCAAAGTTCCAATAT CAGATGTCAAGAAATTTGTCGTGATAAAGGATATGTGCTCGCCGCTACTA AAGGATGTTTCCACCGGGTTCTTTGGATTCATCAGACATGGGAATTCATC AAAGTTCCAATATCAGATGTCAAGAAATTTGTCGTGATAAAGGATATGTG CTCGCCGCTACTAAAGGTCAGATGTGTCATTGTTCGAATATTTATCCACG AGGaaaaaaaGTAGTCGATCAAGAATGTTCTACAAGATGTCGTTCATATA CACCATGTCATGATGTCCAGAGCTGTTGTGGAGGTCCCAACGCATACTCT GTTAGCGTGGTAGGAGATATTGACGTGGCCAAACAAACGTTGAGAAGACT GGCCAATAAATGGCAAACGAATGTGGGATATCATAATTCAATGTTGAGAC ATGTTGGATTACTTTACGATGCTGATTGGAGATCTTCTATTGAGAATGGA GGTCAGATGTGTCATTGTTCGAATATTTATCCACGAGGaaaaaaaGTAGT CGATCAAGAATGTTCTACAAGATGTCGTTCATATACACCATGTCATGATG TCCAGAGCTGTTGTGGAGGTCCCAACGCATACTCTGTTAGCGTGGTAGGA GATATTGACGTGGCCAAACAAACGTTGAGAAGACTGGCCAATAAATGGCA AACGAATGTGGGATATCATAATTCAATGTTGAGACATGTTGGATTACTTT ACGATGCTGATTGGAGATCTTCTATTGAGAATGGAGgcTGGTCGAAATGC AATAAGGAACATTACATCAATGGACTATCAAGAGAAAACCAATACAGTGG ATCGTCGTCAGATCCTCTTGGAAGAATCGATTATGCAAGTTGCCAAAAGG AGCCTGGAGATCAAGTTTGCAACTATCAATTCGCTTTTCTTTTCACCAGT GGAACGGTTtggaaaacttgtaaacaagGATACTTTATGTCTGGTGTCTT CACTCAACCAGGGGCTCAAAAAATCTCCGATCTTGCCCAATTCCATTGTT GCCGACccaagaaacaaaaagaacaatGGGGACATTGTTATAATCACGAT GTATCTTCATCCTTAGATAATAAGGGTTGGTCTACATGTCGATCTGGATA TTTCATGGCTGGAATGGAACGAGGTTATTGTGATGGTTTACACTGcgtca atcaaatcaaatgttGTCAAATGGAAAGCCTGGCTGTCAGTGAAAACCCA AAACTGTCCATCAAGCTCAAGGACACCACAAACAAAGGACAATTGAAAGA ATGCACCATGGAAGCAAGAGATCTTACACCTGAAAGTAAAACCTATGAAT GCAAATCTCTCAGTAATTTGAAAGATGTGGCAAGTTTGGAATCTGTATCT TTCAAGATGGAAGACGAATCAGATCCTTTGACTTCGAAACCCGAACGTGT CAAAAATTATATCCCTGTTATCTGTATGCCAGCTTCTTCAGACTACGAGT GCAAGAAAGTCTTAGCTGTTTCAGTGGCACAATCCAGTACTTTGACTATC GGCTCTGGCTTTTCCATGACCACGACATTTGGTGTGAAAACAGCTTTCGA AGCGAATTGGTTTGGGCAGAAATTCAAGAATGAAATCTCATTTGAATTAT CAGCATCTTCTTCTCTCAATATTGGTACAAGTAAAACAACAACCAAAACG GTAACCGATACAACATGGGTGACCGTTAAGGTTCCAGCTAACCAGCAAGT TATGATTGATCTCCTTCGACAGAAAATCGACATCGTTTACAAATGGAGTG GCGTTTTTCGTCTTCTTGGTAAATACAAAATGAATTGGCAGACAGCAAAG AAAGAAGAAACGAAACAAGATATCACAACAGTATTGAGTGGTCCTGATCG TGAGATGTATGCTTTCGGTAAATGGAAATATCCCAATACTGACGTCTTAC AAGTCGTGGTGACTGATAAATATGGTGAGAAGAAAGGATGTGAACATGCA ACAGGTGTTGATAAAAACTGTCTCATTGAttgagcTGGTCGAAATGCAAT AAGGAACATTACATCAATGGACTATCAAGAGAAAACCAATACAGTGGATC GTCGTCAGATCCTCTTGGAAGAATCGATTATGCAAGTTGCCAAAAGGAGC CTGGAGATCAAGTTTGCAACTATCAATTCGCTTTTCTTTTCACCAGTGGA ACGGTTtggaaaacttgtaaacaagGATACTTTATGTCTGGTGTCTTCAC TCAACCAGGGGCTCAAAAAATCTCCGATCTTGCCCAATTCCATTGTTGCC GACccaagaaacaaaaagaacaatGGGGACATTGTTATAATCACGATGTA TCTTCATCCTTAGATAATAAGGGTTGGTCTACATGTCGATCTGGATATTT CATGGCTGGAATGGAACGAGGTTATTGTGATGGTTTACACTGcgtcaatc aaatcaaatgttGTCAAATGGAAAGCCTGGCTGTCAGTGAAAACCCAAAA CTGTCCATCAAGCTCAAGGACACCACAAACAAAGGACAATTGAAAGAATG CACCATGGAAGCAAGAGATCTTACACCTGAAAGTAAAACCTATGAATGCA AATCTCTCAGTAATTTGAAAGATGTGGCAAGTTTGGAATCTGTATCTTTC AAGATGGAAGACGAATCAGATCCTTTGACTTCGAAACCCGAACGTGTCAA AAATTATATCCCTGTTATCTGTATGCCAGCTTCTTCAGACTACGAGTGCA AGAAAGTCTTAGCTGTTTCAGTGGCACAATCCAGTACTTTGACTATCGGC TCTGGCTTTTCCATGACCACGACATTTGGTGTGAAAACAGCTTTCGAAGC GAATTGGTTTGGGCAGAAATTCAAGAATGAAATCTCATTTGAATTATCAG CATCTTCTTCTCTCAATATTGGTACAAGTAAAACAACAACCAAAACGGTA ACCGATACAACATGGGTGACCGTTAAGGTTCCAGCTAACCAGCAAGTTAT GATTGATCTCCTTCGACAGAAAATCGACATCGTTTACAAATGGAGTGGCG TTTTTCGTCTTCTTGGTAAATACAAAATGAATTGGCAGACAGCAAAGAAA GAAGAAACGAAACAAGATATCACAACAGTATTGAGTGGTCCTGATCGTGA GATGTATGCTTTCGGTAAATGGAAATATCCCAATACTGACGTCTTACAAG TCGTGGTGACTGATAAATATGGTGAGAAGAAAGGATGTGAACATGCAACA GGTGTTGATAAAAACTGTCTCATTGAttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000154_pilon | genome | sc0000154_pilon:658231..666281 + |
Properties
| Property Name | Value |
| Aaloc | 496-1740:6807 |
| Aaloc | 211-492:5992 |
| Aaloc | 97-207:5563 |
| Aaloc | 1-93:1 |
|