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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:651164..653903+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036820 ID=XLOC_036820|Name=XLOC_036820|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2740bp|location=Sequence derived from alignment at sc0000154_pilon:651164..653903+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATGGAAATTGTTATATGGCATCATTGCTGTATGTGTCTTGCCTAT
GATGGGTGCACTGTGGAAAGTCGATcgagaaattaaagaaaatctcAAGC
ATTTCACCATCAATGAACATTCTGTTCTGCTCAACCAAGGTAAGCATGGT
TGTTAAACACTTCATcacatacagtatgtggcccccaaaacgtcgatcga
gactaaaatttctctcaaatctagaggaaaagtggttttaaatttttttt
ttgctgcatgcaaaactttaacatctctacttcaTTTCccaaaagttctt
tttcaaaattttcaatttcaacaatttttttcaatcgcttaaagatagat
agcttttttctaatggccatTCTGTTCTGCTCAACCAAGGTGAGTGTGGT
TATTAAAGGGATATTCAGacggtttgagatatttggattACAAAAGCCTT
CTGTGGTCCTTAGTAAAgcctcaaagtatttttgtgtaataatgttccaa
aatcgagatataaaaatttgaaacttttgaaaatgggttcttattAGTAC
ACGGTTCTTAGGTTGAAATTCTATAATTTTCATtctaaaaagccaaaaaa
ttgtaacttgaatatctcgactttggatagtagttaggcaaaaatatttt
gagattttgctcaggaGAATAGACGGATCCCTCaccatgccaaatattac
aaaccatctgattaccCCTTTTAACACTATTTTATCATAACATCAAGACT
AAACATCGTGACCTAAACATGACACGCTAGAAAAGTCGTCGATGCTTTCA
CCAACCGGCAATTCAACTGACCCTGAGCTTATTCAAAAGTTAAATTTGAA
GGGTCGATTGACATTTTCTCGGTTAAATTCCCACTGATAATAATAAATTA
TAGTTTGTTAAATAGTTAAAGAAAATTGatcttcattttcgatttttttc
gaaGAAACCTATTCGTCCATTCAATGTTCTCTTTCTAACGCAGATTTACT
TttaattcatcttttttgtcaCAAAAGTTTCAAATTGTACAGATTGCCTT
TTTTGTAACAGACTTTAATTAATATGTAATAAAGGcaacaatttcacaaa
aattacgaaaaaatgattcaaaaaacatttttctttcaagtggACCGGAA
AAATGGGGAATGGAAATTGTTTGTAGCCGGGTCCTTTATGGTTCCTCCCC
ATCCATGATTctagacacccctgtgtcacagcccCTGGTGAAACTTTTCC
CCACAGTGGTgatgataaaattttcaaatgaagaCCCAATGGgaataaaa
aagtcaaaaaatccggtgggatggttttggagtacaattttctACATTGA
GTTTTAAATAGGGATTGAATCAAAGTCGATTCCCCAGTGAGGATATTATA
GGGTATTCTTCCCACCGGGGATGAGATTTTTGGCTGAATTTTCCAGCGGG
GCTGGGATCCCAGagggtctgtgatacaggggtaaTTATAGGGTTGATAA
TCCATCTACATGGTCTATTTTTCAGTGTTGGGATTGACTTGGAGATTGTA
TTTCATTTCTTTGGTGATATCATTGATGGGGTTTGGTTACCATATTTTCA
CActgaagaaattcaaaacagtgAGGTTATTGACACACGTACTTCACATT
CTCAGTGGTAAGGATTTCTTACAGGTATTCTTCTCTATGAATGAtgtttc
ggatgttcttaactttttgagatttatgcttaaaaatgttcttaacatgt
tctattttgacctttttgtgaatatttttgaccattttcctaagaaatag
ggtgttttgagtctacaaagctttaaaatgtttttaacttgttcttaaca
ttttggatagcaaagccttatgttcttatatagtttattcttatataaaa
aaacgtgtatggaaAGAAGGTGCGCGTCTACGCTGACAAATCAGAGTAAC
CAGTATAATTTCTCCGTGAAGCAatttggatttaacacaggttaaatcac
agtttaacttttatttgataagtgCCACATACAGTACTCgaatggctggg
tggccgccctccgccaactgagtctactttgctaatagccACGTGACGTC
ATGTTCTTAATGGCCGTCGCATCTCCCTGTTCAagtcgacgctctaactg
aaagctgacaggatgaaatatttttacctccctccctccctgcagttatg
cttgtaggcgatcctcacttatttatactaatattgtatttatcgggaca
aattttccccaaaacttactattcgaggattagccataaatttatgccaa
acttatatctaccgactcacacttacttctcaGCCGTCCGACTACTTGAT
TGGTTCTACCCCTAATCTAGGCCATAGACAATGGAAAGTTAAAGCAAGAA
ATTAGCGAAGCCTTCAGATTTCCGCTGCTTTAGGAATAACAAATTGTAAG
ATTTAATCTGCCATCCATATCTATCCTGTTTAAGCACGAATCATCAGGAA
TTAACACTGCATTTCCATcaacatttgttttttttaggtttcacTTCTAT
GTATGGCAGCTATCAAATCCTACATTTATTCAAGATAGACAAGAGCTATA
TTCCTGACTCTCGTACTCTTTCACTAGCCTATATATCGTCGATTATTAGC
CTCTTGATTGGAGGCTATGGAGTATGTCAATCGAGGGAAGAAAGGAAAAT
TGATATCGAGACAGCAGATATTGTAAATAGGAACAACTGA Coding sequence (CDS) from alignment at sc0000154_pilon:651164..653903+ >XLOC_036820 ID=XLOC_036820|Name=XLOC_036820|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=948bp|location=Sequence derived from alignment at sc0000154_pilon:651164..653903+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATGGAAATTGTTATATGGCATCATTGCTGTATGTGTCTTGCCTAT
GATGGGTGCACTGTGGAAAGTCGATcgagaaattaaagaaaatctcAAGC
ATTTCACCATCAATGAACATTCTGTTCTGCTCAACCAAGATGGAATGGAA
ATTGTTATATGGCATCATTGCTGTATGTGTCTTGCCTATGATGGGTGCAC
TGTGGAAAGTCGATcgagaaattaaagaaaatctcAAGCATTTCACCATC
AATGAACATTCTGTTCTGCTCAACCAAGTGTTGGGATTGACTTGGAGATT
GTATTTCATTTCTTTGGTGATATCATTGATGGGGTTTGGTTACCATATTT
TCACActgaagaaattcaaaacagtgAGGTTATTGACACACGTACTTCAC
ATTCTCAGTGTGTTGGGATTGACTTGGAGATTGTATTTCATTTCTTTGGT
GATATCATTGATGGGGTTTGGTTACCATATTTTCACActgaagaaattca
aaacagtgAGGTTATTGACACACGTACTTCACATTCTCAGTGgtttcacT
TCTATGTATGGCAGCTATCAAATCCTACATTTATTCAAGATAGACAAGAG
CTATATTCCTGACTCTCGTACTCTTTCACTAGCCTATATATCGTCGATTA
TTAGCCTCTTGATTGGAGGCTATGGAGTATGTCAATCGAGGGAAGAAAGG
AAAATTGATATCGAGACAGCAGATATTGTAAATAGGAACAACTGAgtttc
acTTCTATGTATGGCAGCTATCAAATCCTACATTTATTCAAGATAGACAA
GAGCTATATTCCTGACTCTCGTACTCTTTCACTAGCCTATATATCGTCGA
TTATTAGCCTCTTGATTGGAGGCTATGGAGTATGTCAATCGAGGGAAGAA
AGGAAAATTGATATCGAGACAGCAGATATTGTAAATAGGAACAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:651164..653903 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 274-474:2540 |
| Aaloc | 142-270:1528 |
| Aaloc | 1-138:1 |
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