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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:635871..640487+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036818 ID=XLOC_036818|Name=XLOC_036818|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4617bp|location=Sequence derived from alignment at sc0000154_pilon:635871..640487+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGGACAAGATCAAAGAGATGGCCAAACTCCATACGTCAAAGCAGA
TAATGGTAGTACTATTCATGGTGGTGTCAATATTACTAATGGACCAGCCA
CCATCATTGGTGGAAATCAAATCATCAATAACATTCCTGCTGGAGGACAG
CCTCCACCATACATTGATACTGAGAATGTGATGGCGAATAGAAGAAATTT
GCCACCTGTTCAAGGAGAAAGGAAAGCACCAAATGATCAAAGACCTTTCC
AAAGAGAACCATCTCAAAGTGGTATGATCAATATACTTACCCAttctatt
ttataagaacaaactaccgggtgcgccacaaaaatgtttctctctttaaa
actaattttctcaaaatctaagtaCTAGTATTTGAAACAAGATTAAGAAA
TTAAGAATACGCCAATCAACCCTTGCACCACTAGAGGGCTGGGTTTGAGT
TACCAGGAAGGAACAACATTAAAATgtttgaagacattgcattgacatcc
ttttaaaacaaataatttcAACGTTGTTTCCTTGTAAATTTATTACCAGA
CCCCTCAATAGCCGACCGCGTCGGTAAAAGCTAATATTTGTGTATTTCAA
TTCAATGATTAGGACTATCAATCTTTTTGTAAACTATTAAACTTAATTCC
CGTTCATGAAGCCTTCTCAGCATAAGGATTGATAGGTCAATTCGACTATT
TTCTTTATTAGATGATCGATCAAATCCACAGACTCAATACGACATTGAAA
TGAAGGGTATGTGTTTATCTTTAAGTTTTGGTAAATAACAAGAGCCTTAT
ATTAGCCATCCTTTCTAATTAGATCATAAAACGAAACCATACACCACCTC
CCATGTGCGGAAATCCTCCTTTTGTGGTTTATGGAGGGTTTTACCAACTG
TTTATATAAATATAAGACAAGTTTTGTTTGTAATAGATGTTGCAGAGTGC
TCAATGAAACCAGGGCcaagtaaaatattaaaaatctcTTTCATCacaac
agaaaataaaaataaaatgcacACTACTCAGAGTTGTGTGCTAttttttt
GTACACCTGACAAGTGCAGTAGCACGAAACTCTGAGTAGTGTACTTTTTT
AGTGATGAAAGGTATCTTTTactatcggcgatccaaaaaatatctgcaat
ctgattggttaaaaaattttctccatcacgtatcacgaaaatcgctaaaa
tttgtcatcacgcaaaaaatagcgaaaaaagcccaaatcacgcatcactc
ctcaaatttttgccctatcaagCATCACGCCagaatcttgatcacgccat
cacggcaaaaaaaatctctaatcacgccacaCAAGAAAAacgtcccaatc
acgccatcacccaaaccgctggggggtagcctatactagacgtcacccac
gtttttttttacgcaattaacgtctattccactttgcgactttttcgaat
gttttgaaccCGGGTTTTCGGgatctaaacattcgattttttgacgtcac
ttttaattttcgaagctcctgcaggagcaaaataatcgaatttgcgtcaa
agcacttgaaaggcttctatttttcgaaaatcgtcaaagtggaactcact
aacaAACGAgtagcctatctctatcccaacacgcgattttttgaTCACTC
TTTGGTCTATCACTTGTTACCACTTTCGCGTCTACGATGGAGAACTTGAC
CGAATTTGTCGACgccgtgtttttttataaaatttgacgTCACTAGCGAC
gaaaaaagatggcgaccgaaaacataaacaaagaagggcgggtggaaagg
aaaagaaaaaacttgaatGTTAAGACTTattgcagaattttttttaaata
ttgtgaGGTGTGTCGCTGTGTTGATTgtacaaaatgttacaaaaattaaa
cacaacaaaaaatgtattgagtgttgtttataaaatttcactacctaaaa
agtaaaaaacagaTAAAGTAACAACCCTACTTCATCAATAaaagcattga
aaataaattgctcaaattttttgaaatagaaaatataaagCTTACCACCA
TACATAAAAACGGAGGAAtacaagaattaaaaaaaaaattatgcacctAA
AACGACAAAAGATTCCTACcactttgtaaaaaaatatgcaaaattccctt
gaaaagagtaaaaaaagtataaaatatataaataagatTTACTTTGATTT
CTGGATTTGTACTTTGCATTTATCAAGCTGAAAcatgttttgattatttc
gaaactttCAAATAATTATTTCTATACTCATAGTGGTCTTCGGTAGAATC
cacaaaaggaaagaaaaggtATCTTTTAAAGGTCTCCTATCTCGAGGATT
ATTctgttaaaaattataaataaaataatccaGCTGTAGACCATCAGCCA
CATTTCCTcatgatttcatcaaaattatttgGTGGACCTCTCGAATTGTG
CTTGCCACCACACCACGTAACATATATTCTCTTTGTTAACATTTCTCATT
ATGAAATACACTACCATGCATTCTGTATGTCCACTGtctgaatagaaata
gaaatgtccaCGATAGAAACGATCTGACAAGTGATTAAAAACAATGTTAC
TCAAATCTTTCGAAGTGAAAAAATAGTGCTttattttggtaacaaaaaca
aGGAGCCTAAGTATATACTCCTGTACTTCCAAGTTTGTTCGAAGCAGGGA
TGATCCATGGAGCAATCTTTAACAAAAATCCAACCACTATCATTCCAGCA
TACAGATATGTTTGATTAATTTGTGTGTCTCACCACACCACTGTCCATTC
TTCGATTCAATTTCTGGATAATTCTAGACAACTAGTGACTAGCCATTCCA
AAAACTTCTTGAAGAGTGACTCTTCAAagttcaaagcacaaaataaataa
aaacacaacATTCTGCAACATTTCGAACTCTCTTGGTACGTTTTAGAATG
TTTCTAAAGCCacatattttcgaatgttttttgttcgAAATGTAGCAAAA
CATCAGTTCCTACTCTTCCCGCCTCTGTTTTtgagctttgtttacaaaaa
cactCCTTCGCGGTGACAAATTTTATTGGTAGAGTTTTTGCTGCAGTCAA
AAGCTACGGTCCTTTGGCTTGAAGCCGAGGATTTTTATTCCCCCACGAAT
CTCTGGGGGAATAAATGTAAAAAGTTACAGACGAtacggtgtcgaggaaa
aagccgtggtcgtctggtacaggctaacaaacgagatgaaaaatcccggt
ttttaatGAGGTGCTCGttactggggggggggctcatatatcttgtattt
tacatgtacaaaattgacgaaaagatgttgttgtattgtagcggtagaag
taatctaacgtcactttgcaaaaaaggtGCCCTGCACTTTTTTCCAAcat
gcattttttgggtcaccgataaaccagttatcagacatttccCCGtacaa
tatgaaaatatttcattcgttccggattttccgtatatttacggaaaaat
attgtacggaaaaatcttggaactcgtaaaatatttctcatattgtactc
gcaccTGTCcaataactattacatattttAAATATAAGACAACAGAGTAA
TAACTTAGAACGTTTTTAaagaaatgttatttttatgatagagaaattct
caaaatttgtgcttGTGCGGAGTGGGACAGAGAAAAGGTTGTTCTTTTAT
TGGTtcaaaaatgctgtgtaagcaactGGTTGGAGAAATACGTTACATAA
TGTCCTTTAATATTGCTTCGTTTTACAGATCTGGTGAACATGGTTGCACA
ACGTTACCAAGAACCACCAGATTTCTTGTACAACATGGGAAACAATGGCC
GTGTGGTTATCATCAATAATGTGCATTTTGACCATTTCAAAGAAAGAATT
GGTTCTGATCAAGATGTTAAATTATTACAAGATTTCTTCCTATACACCAT
CCGTTGGAATGATAATTTAGAAATATATCGAGACTTAACTGTTGCTAAGA
TGAAAGATAAACTCACCAATTTGAGTCGGTACGATTTCACACGAAACGGt
gctttttttcttattatctTAAGCCATGGAAATGAGTATGGAATATGTGG
ACGTGATAGTCGTCAAAAAGATCATCGAAATGTGTTAAAAATTGAGGAAG
ATGTTCTCCCACTATTCACCAGTACAAAATGTCCTTCTCTTGTTGAAAAA
CCTAAAGTCTTTATTATGCAAGCGTGCCGTGGAGACGTTGATGATTTGGG
TTACTGTATTGAAGATACGGACGCCGACTGTGCTGCACCACCGACGAATT
TCAAACGCCATGTTCCAGACACGAGTGAGTTTCTCCTTTGTTATCCATGC
AGTCCTGGATACACTTCAGTCAGGAATCAAGCTTTCGGCTCAGTGTTTAT
TAATTCTCTGGTACAAATTTTCAAAGAGCAATACAAACGAGAAGATATTT
TACGAATGTTGCTCCGAGTTAACCATAAGATTGCAAAGGACACTAATTCG
TTACGTATTAAACAGATGCCCTGTCATGATAACCGTTTAACTCGGTTGAc
tttctttgaagactttttcttggagaaaaagaaacttttgattGAAAGTG
GTGCATTATCATCTTAA Coding sequence (CDS) from alignment at sc0000154_pilon:635871..640487+ >XLOC_036818 ID=XLOC_036818|Name=XLOC_036818|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2310bp|location=Sequence derived from alignment at sc0000154_pilon:635871..640487+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGGACAAGATCAAAGAGATGGCCAAACTCCATACGTCAAAGCAGA
TAATGGTAGTACTATTCATGGTGGTGTCAATATTACTAATGGACCAGCCA
CCATCATTGGTGGAAATCAAATCATCAATAACATTCCTGCTGGAGGACAG
CCTCCACCATACATTGATACTGAGAATGTGATGGCGAATAGAAGAAATTT
GCCACCTGTTCAAGGAGAAAGGAAAGCACCAAATGATCAAAGACCTTTCC
AAAGAGAACCATCTCAAAGTGATGTCAGGACAAGATCAAAGAGATGGCCA
AACTCCATACGTCAAAGCAGATAATGGTAGTACTATTCATGGTGGTGTCA
ATATTACTAATGGACCAGCCACCATCATTGGTGGAAATCAAATCATCAAT
AACATTCCTGCTGGAGGACAGCCTCCACCATACATTGATACTGAGAATGT
GATGGCGAATAGAAGAAATTTGCCACCTGTTCAAGGAGAAAGGAAAGCAC
CAAATGATCAAAGACCTTTCCAAAGAGAACCATCTCAAAGTGATGATCGA
TCAAATCCACAGACTCAATACGACATTGAAATGAAGGATGATCGATCAAA
TCCACAGACTCAATACGACATTGAAATGAAGGATCTGGTGAACATGGTTG
CACAACGTTACCAAGAACCACCAGATTTCTTGTACAACATGGGAAACAAT
GGCCGTGTGGTTATCATCAATAATGTGCATTTTGACCATTTCAAAGAAAG
AATTGGTTCTGATCAAGATGTTAAATTATTACAAGATTTCTTCCTATACA
CCATCCGTTGGAATGATAATTTAGAAATATATCGAGACTTAACTGTTGCT
AAGATGAAAGATAAACTCACCAATTTGAGTCGGTACGATTTCACACGAAA
CGGtgctttttttcttattatctTAAGCCATGGAAATGAGTATGGAATAT
GTGGACGTGATAGTCGTCAAAAAGATCATCGAAATGTGTTAAAAATTGAG
GAAGATGTTCTCCCACTATTCACCAGTACAAAATGTCCTTCTCTTGTTGA
AAAACCTAAAGTCTTTATTATGCAAGCGTGCCGTGGAGACGTTGATGATT
TGGGTTACTGTATTGAAGATACGGACGCCGACTGTGCTGCACCACCGACG
AATTTCAAACGCCATGTTCCAGACACGAGTGAGTTTCTCCTTTGTTATCC
ATGCAGTCCTGGATACACTTCAGTCAGGAATCAAGCTTTCGGCTCAGTGT
TTATTAATTCTCTGGTACAAATTTTCAAAGAGCAATACAAACGAGAAGAT
ATTTTACGAATGTTGCTCCGAGTTAACCATAAGATTGCAAAGGACACTAA
TTCGTTACGTATTAAACAGATGCCCTGTCATGATAACCGTTTAACTCGGT
TGActttctttgaagactttttcttggagaaaaagaaacttttgattGAA
AGTGGTGCATTATCATCTTAAATCTGGTGAACATGGTTGCACAACGTTAC
CAAGAACCACCAGATTTCTTGTACAACATGGGAAACAATGGCCGTGTGGT
TATCATCAATAATGTGCATTTTGACCATTTCAAAGAAAGAATTGGTTCTG
ATCAAGATGTTAAATTATTACAAGATTTCTTCCTATACACCATCCGTTGG
AATGATAATTTAGAAATATATCGAGACTTAACTGTTGCTAAGATGAAAGA
TAAACTCACCAATTTGAGTCGGTACGATTTCACACGAAACGGtgcttttt
ttcttattatctTAAGCCATGGAAATGAGTATGGAATATGTGGACGTGAT
AGTCGTCAAAAAGATCATCGAAATGTGTTAAAAATTGAGGAAGATGTTCT
CCCACTATTCACCAGTACAAAATGTCCTTCTCTTGTTGAAAAACCTAAAG
TCTTTATTATGCAAGCGTGCCGTGGAGACGTTGATGATTTGGGTTACTGT
ATTGAAGATACGGACGCCGACTGTGCTGCACCACCGACGAATTTCAAACG
CCATGTTCCAGACACGAGTGAGTTTCTCCTTTGTTATCCATGCAGTCCTG
GATACACTTCAGTCAGGAATCAAGCTTTCGGCTCAGTGTTTATTAATTCT
CTGGTACAAATTTTCAAAGAGCAATACAAACGAGAAGATATTTTACGAAT
GTTGCTCCGAGTTAACCATAAGATTGCAAAGGACACTAATTCGTTACGTA
TTAAACAGATGCCCTGTCATGATAACCGTTTAACTCGGTTGActttcttt
gaagactttttcttggagaaaaagaaacttttgattGAAAGTGGTGCATT
ATCATCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:635871..640487 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 319-1155:3781 |
| Aaloc | 274-315:714 |
| Aaloc | 1-270:1 |
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