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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:472968..476064+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036816 ID=XLOC_036816|Name=XLOC_036816|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3097bp|location=Sequence derived from alignment at sc0000154_pilon:472968..476064+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTACTGGTTTAATTCACATCCAACAAGCATCGATCCAGGAACACTCAAG
TTGTCAAGGAACAGGTGGCTCATGTGAGATAACAGACGCTGAAGATCGTA
TCAGGGGAGTTTGTGATGACAAGCAAACTTGTACAATTACTGCCATTTTA
TCATCAAATGACGTTGATTTTAACTGTGTTCAGGTGGCTCAGGTCTCCAT
CGAATACAGTTGTGGTAAGAAAGTAACACCTTAAGTAGattaatttttta
agattttcgagAATTTAAAATCCCAAACTTAGactaataaagagttctta
tacaaaatagaaattgccgcgggagagtggattggaaagacaGTGAAATA
TGGATGATCGCATAATTCTTCTTCAACATTCGAACcattgtattcagtga
acatataaaaaaatagatcccattgaaagtttattctgcagcgaaataca
acgacttggtttactagtctatccCAAACTCGGCCAAAGCCTCtaaaaaa
aagcagaaaaaaatcgaatgaaaaaaaaGCCGCAAGCTTTTTATGTcagt
ttgaagttttgaaattcaaaaagttgaaaattttcacatcAAATTTTGTG
CACTGGAAAGGTCAATTGATGTATTACAGAactataaaataatgaaaatt
ttcatcatATAGATCAAGACGGAACCTGGAACACATGGACGAACTGGACG
TCTTGTGAGAAGACTTGTGGTTATGAAAAGCGTAACCGCACTCGGGAATG
TGTGGAGCCATTGGGTGGTGGCGCCCCATGTAATGGTTTGAATGTTGAAG
AAGAATTATGCGATCATCCATATTGTGAAGGTAAAttctttaaactcaaa
ttccgtaaaaaataagcataatgctaagcatacctccaagctgaaatgca
aaaaaatagcGTGTAGCTTTTCCTAAACGAtgacctttttagggttacCT
TTATGAAGCTATTTTTTAGCTTTCTTAGACCAAGGACTTTCGCATACGTc
gtcaaattacaaaaaaactgtAACTCTTTGAGCTGAATCAATGTTCCgat
ttaaaatcgaaatttccataaatccAAAGAATCGAagtctaaatatataa
atatgcATTAAATTCTGTGAATAATTTCATGATTCAACCGTATCTGTTCA
AATCTGTTCAATTAGTAAAAATACAAAGTTTATATTAAATTTTGGGggat
tttattttgctttgtttaTCTGTATTTGATTATTCCAAGAAAATCGCAGG
AAGGAACGCAGAAAGTCTGTATGTTTTGACAGGGTAGTAACCAATGATGT
CACTTTCCATGGTAACggggggggggATGTCACCCAAAGCCTCACCTTTC
AAATTTGAGGAACAAtaatcaatcataaaatccctttgcacaagctccTG
CACACGAGAAGACATAGTGTCCTCTACTATATGCTTTGAAAGTTGTTTCC
CAGTAATTGTCTTACGTTCGACTTTCCAGGTTGTGACGTTGACACGAAGG
ATCAAACGTCGGAAAACGTCGAAGAATGTATTGCAGATGAAAAACTTTGC
TTGTCCCATGATGGAACACTATGTTACAAAAGGCACTGTAAGTGAGAAAT
ATTCTTCCAAACTCAAACCCAGTCCTTAGCTGACTTtgttatgattctga
tagcaccAACGCCTATCAGTGAAATTTAATAGTGATGCAAGTGGATCTGG
ATTTACTGTACTGATGGGTAAAATAAAATCGTAACATTCATCTCCTTTCG
TTTGCGATCAGTATCCCAAATCGAATTAAAGGACTGGATATGGGTTTAGA
GATTGAAACTCTGCAGTATTTTTATTCTAATTTCTGTGGAGGACacattc
atcttttttcatACACAACAGTTTCAACATACTTTACGAGAGTCGGCAAA
TTTGAGCTCTCGCGTCTTAGCAATCTggttccttataaaaataaaaatat
gtataTTTTTCAGTCAACGGTAGTGTGGCCGAATGGACAGAGTGGACAAC
ATGTGTGGAAGGTGAACAAGTCCGTATTAGAGACTGTCAACAAGGTTTTG
GACCGAATGCAGATTGCGCAGGCGAAGAATTAACGCAGGTGAAGGCGTGT
CAAAACGAAGAACAAAAACCAAAATGTAAGAGCTAATctaattttcgtga
ttttagtACACTAGCTTGCGTTTGCCTTTCATTAGACGCGGGAACAATAA
TACGTAGAAagcgttcttataaaaaagataaattgtGTTCAGCTGACGTA
TAGTGAGCCAGCAACTGCAGCGAAATGCAACGACGTGGCTTACTAGTTGA
AGAAGTTTTCTATCGGCGGTGGTTTTAAGTATGTAACGCACAAGGAAAAT
TCACCTATGTTTTCTTTCTCTTAGTCTCAGtcaataaagtaaaataaacg
gttcttgtttttttctaccgggtgcgccacaaaaaggtTTCTCTTTTCAC
ACCCCCGTCTCATAGCCCCGATGAATCTTTtttcctcaatggggataaaa
ttccAATTgtaatcccaatggggataaataTTCTATTGCTCcaatgttaa
aaaatccagtagggATGTTTTTGGTGGAgtttgaatttcgagtgggaaag
aaatcaaagtcaattttccagtggggctgaaattcaaaggtattttccca
ccggggacgaatttttagccaaattttccaatggggctGGGCTTCCagag
ggtctgtgacacagggtgtCTTTTTGAAACTAATCTTcccgaaatcttaa
aattaaaaaaaacactccTTATTCAAAAAGGGGAAGAATAAATGACGAAA
AATCtccatatttcatatttttttgtagCAAACCCTCCTTCACAATCGAT
CTTCGTAAAgagaaaaagtgacgaaaacaTGACGTCGTCGAAACTGATCG
CACGTGACGTCACACAGATCACGTGTGTTTTGAAATGCAAAGTGATCGGT
TGGTGTCGCAAAGCAGGATGGAGAGCTGCAAAGGATGGCGGGATGCTAGG
GATCTGTTTTGGATTTGATGGAGTTGACGCTCCAGACGAAAGtttgaaag
tatttcaaaatgtgATTGTGTTCGATAACCCTACATGTGCtccataa Coding sequence (CDS) from alignment at sc0000154_pilon:472968..476064+ >XLOC_036816 ID=XLOC_036816|Name=XLOC_036816|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1842bp|location=Sequence derived from alignment at sc0000154_pilon:472968..476064+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTACTGGTTTAATTCACATCCAACAAGCATCGATCCAGGAACACTCAAG
TTGTCAAGGAACAGGTGGCTCATGTGAGATAACAGACGCTGAAGATCGTA
TCAGGGGAGTTTGTGATGACAAGCAAACTTGTACAATTACTGCCATTTTA
TCATCAAATGACGTTGATTTTAACTGTGTTCAGGTGGCTCAGGTCTCCAT
CGAATACAGTTGTGAGTACTGGTTTAATTCACATCCAACAAGCATCGATC
CAGGAACACTCAAGTTGTCAAGGAACAGGTGGCTCATGTGAGATAACAGA
CGCTGAAGATCGTATCAGGGGAGTTTGTGATGACAAGCAAACTTGTACAA
TTACTGCCATTTTATCATCAAATGACGTTGATTTTAACTGTGTTCAGGTG
GCTCAGGTCTCCATCGAATACAGTTGTGATCAAGACGGAACCTGGAACAC
ATGGACGAACTGGACGTCTTGTGAGAAGACTTGTGGTTATGAAAAGCGTA
ACCGCACTCGGGAATGTGTGGAGCCATTGGGTGGTGGCGCCCCATGTAAT
GGTTTGAATGTTGAAGAAGAATTATGCGATCATCCATATTGTGAAGATCA
AGACGGAACCTGGAACACATGGACGAACTGGACGTCTTGTGAGAAGACTT
GTGGTTATGAAAAGCGTAACCGCACTCGGGAATGTGTGGAGCCATTGGGT
GGTGGCGCCCCATGTAATGGTTTGAATGTTGAAGAAGAATTATGCGATCA
TCCATATTGTGAAGGTTGTGACGTTGACACGAAGGATCAAACGTCGGAAA
ACGTCGAAGAATGTATTGCAGATGAAAAACTTTGCTTGTCCCATGATGGA
ACACTATGTTACAAAAGGCACTGTTGTGACGTTGACACGAAGGATCAAAC
GTCGGAAAACGTCGAAGAATGTATTGCAGATGAAAAACTTTGCTTGTCCC
ATGATGGAACACTATGTTACAAAAGGCACTTCAACGGTAGTGTGGCCGAA
TGGACAGAGTGGACAACATGTGTGGAAGGTGAACAAGTCCGTATTAGAGA
CTGTCAACAAGGTTTTGGACCGAATGCAGATTGCGCAGGCGAAGAATTAA
CGCAGGTGAAGGCGTGTCAAAACGAAGAACAAAAACCAAAATTCAACGGT
AGTGTGGCCGAATGGACAGAGTGGACAACATGTGTGGAAGGTGAACAAGT
CCGTATTAGAGACTGTCAACAAGGTTTTGGACCGAATGCAGATTGCGCAG
GCGAAGAATTAACGCAGGTGAAGGCGTGTCAAAACGAAGAACAAAAACCA
AAATCAAACCCTCCTTCACAATCGATCTTCGTAAAgagaaaaagtgacga
aaacaTGACGTCGTCGAAACTGATCGCACGTGACGTCACACAGATCACGT
GTGTTTTGAAATGCAAAGTGATCGGTTGGTGTCGCAAAGCAGGATGGAGA
GCTGCAAAGGATGGCGGGATGCTAGGGATCTGTTTTGGATTTGATGGAGT
TGACGCTCCAGACGAAAGtttgaaagtatttcaaaatgtgATTGTGTTCG
ATAACCCTACATGTGCtccataaCAAACCCTCCTTCACAATCGATCTTCG
TAAAgagaaaaagtgacgaaaacaTGACGTCGTCGAAACTGATCGCACGT
GACGTCACACAGATCACGTGTGTTTTGAAATGCAAAGTGATCGGTTGGTG
TCGCAAAGCAGGATGGAGAGCTGCAAAGGATGGCGGGATGCTAGGGATCT
GTTTTGGATTTGATGGAGTTGACGCTCCAGACGAAAGtttgaaagtattt
caaaatgtgATTGTGTTCGATAACCCTACATGTGCtccataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:472968..476064 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 655-921:2831 |
| Aaloc | 493-651:1966 |
| Aaloc | 385-489:1482 |
| Aaloc | 217-381:665 |
| Aaloc | 1-213:1 |
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