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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:465060..469959+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036815 ID=XLOC_036815|Name=XLOC_036815|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4900bp|location=Sequence derived from alignment at sc0000154_pilon:465060..469959+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTACTTAGATATACAAAGGTATGTATGCGATTCTTTCAATGGATATT
ACCTAAGCATTGCGATGATTCGTAACTATTTCTGTCTTTTCGGAATAAGG
GAACCGAGATATCATACAGTTTACTCGCTAGATGTGCTTCTAGAGAGAGA
GATAGTCCTTCCGATTAACGGAATATGACAGCATTTGCTATTCTAGGATA
TGAAAATCACTGATCTTATCTAACTCCCTGAAATCGTGCTCGTACCACAC
ATCATAACTTTCTGACATGACGTTTAccttttttataacttttagcCTCT
TCTTCGCACGGCGACATGCGGCTGTTTTATGACGAGGTcagcattacgta
atgtttcGTATATCCCGATGGTCGTGGAGCAAAGTgtaagttttcttttg
tttctttcagcGGTAGTTTTCAGTCATCAACAACCTTTCAGTGGACATCT
aaatacagttgatgctctctaattcgacgttctactattcgatacgctac
attattcgataatattgaaatcgACCGTCAACAGGAAACTTTCATAaacg
acattctactattcgataagctcccttatttaatgaaaatccaattctcc
TTGACGATCGAATTTTAGAGCgtcttttatgagagtttcttgatGGCGGT
GACTTTCATCAATATCGAAGTTTCATTATTCCTTTACTTTAACTTGTGGT
ATGACGATATTAACACAAAGTGTTCAAAGTGACAATATCTCTTTTTGGCG
TACCACAAATATCGAATGTTGTaaaaaaaCTTCGTTCATTGCTTTTCATG
ACAATATTTAGGCACCTAATTTCTTACCAATTTCCTATTTCCATATTAGG
TATTAGTATGAATCATAATTATAacaactttcttctttttcatcaacTGT
AGGGTCGGACAGAACGTTCATATGATATCTACTCGAGGCTTTTAAAAGAA
CGAATCATCTGCCTGTTTGGTCCCGTAAGTTGGTTATTTCCATAAAATTA
AGTTCATCCGTTTGCTTATAATTTCTTATGTCACATGCCAACGATGGTAT
GACTGAATATTGGAGAGCTAACTGATGCTTTTCTTGAAGGCTTTTACCCT
CCaaattgtaaaacttttttcattaattCTTTTATGACTTCTGCTCCTac
ctagcctagttaactaagttcgtattcacaaggctaggacacactgctta
tggcaatatagcgttttcggcgctcCAAagatttttaaggattttaagtt
tgcctatttagtcacaacttaccatcataTTTATCCTAGTGAATGAATCA
GACTTACTGAATTTTCTAGGCTATTCTGCTCACTTTGTTCATGCTCCTTA
AAATAAGTGGGTGTTTATAGTGTGGAGTCctgatattttttaatatttct
gaTGAACTGCTAAATCTTCATTTCTTCAGATCAATGACACTGTATCGAGC
TTGATCGTGGCTCAGTTGTTATTTTTACAATCGGAGAGCAGCAAGAAACC
AATTCACATGTACATCAACAGTCCAGGTATGAATATTTGATGTCTCCTGA
AGTTAGAACGTCGCAGTCGGAGCttttcaatatttaccgttcaattgatt
tttaattttttatagtatttggaccttttttagctatactacttagattt
ttatcatggcgttctaaatctataGGCCTAGCAAGCGTGCACCAAGCGTG
TTGgggttaaaatttctgaaaatactcGAAGACGGTAAATTGTGACGACA
TTTCGCTAATTTGCTAGATTTCGAACGCTGTTATTCTGATGCATATGACG
ATGTTCCAggtaccaaagatttccaaaatggtactttgTCCCTCTCTAAG
AATGCTCAGTAATCAAAGAGTAGGATCAATGGTAAGTGGGAGAAAAATGG
CGCCCACCATTACCTTCGGATAGAAGATGATGAACCTTTGGGTTTTCTCC
GATAGactttcataaattacgtcatgaacatcacttgcctcgtattcaaa
caattaccatggtgattatgtcccttgagacattgaataatttttttata
aatagaaagtagttttaatcaaatctgatgggagttaatcaccatggcaa
taatttcaaaacgaggcatatgatgttcgtgacgtaatttatgaaatggT
CTATTGCGGTGGAAAAACTAGGTCGCAAAAACAAGACAACCGGTTTTGTA
CATCATAATTGGATTGTTCATCTTTTTAGGAGGAGTTGTGACGGCAGGTC
TTGCAATTTACGACACAATGCAGGTTCGATGTTCCTCCTTTGTCATTTCA
ACACCAAGACAGtttgatcattttaaaaaagtCGATTAATATACAGTGGT
CAAGGCaaggtttttcgtctgagaTAGACACGGCATAATTAGCAcaattt
ccttgaaattttggCCTCTCATGTAGAAATTCAAGACGGAAAAGCCTCTT
CATAAACTTCACTGAGAGGAAAGAAATCTTAAAACTGAATATAACACTGA
TTGAAAAATTTGGCACTTATAACTCAttccttttttcttcaaaaaagctg
taaaacttttttaacaaaGGTAATCTGGAACCATTCTCCTACTCTTCAGT
tactgtttttcttttatttccagTACATCCACTATATCTTTCTTCAAAAC
AGTTATGATGATTTTTAACAGTGtactttttaactttatactcaactggt
actctactactctatctttttctttttcttttattttcagtacATCCAAC
CTCCAGTAGCGACATGGTGTGTGGGACAAGCTTGCAGTATGGGGTCCCTC
CTCCTCGCTTCTGGTGCACCAGGGTTACGTCACGCTCTTCCCCACTCACG
GATCATGCTACATCAACCGCACGGTGGAGCGCAGGTCTGTTCATCTTTAT
TATCAACTGTGATAGCCATGGGAGttgttttttgaatttcgaattCGTAG
TTTCACCTCACCCTTTTTAACAACTTTACCTATGGGAGttttagcgaccg
tagtgcagtggtagagcatccggctacggtgcgcaaggttgtgggttcaa
ctcCAAGCCGGGTTATTCCagagattcccaaaatggtacttgatgcctct
ctgctcgatgctcagcaattaagagatggatcaagggtaagtggagcaat
ccagggagaaagagttgCGCCTgtctaccttcgggtagacagctatcgaa
agaggagccttcgggtcgcctccgactgcggtcgcagacttactaacTAC
CTATGCGAGTTGTTTCGAACTTTGAATTCTCTTACTTTCTCTATATTACC
GCAAACCGTAATGATTTTGTCTACCGGCCGCTTTTACTCAGGGGAGCTGT
TTTCAACTTTCATGCCATCTGATTTGATATGGGGCATCCATATATAGTat
gtacgcagtgaagggggagagggggtttagcaaaagcctACGTCAACTGT
TTGAATGACATGATAATATTCATTGCATACAAGGAGGTTGTCAAATATTT
GGGAAACTTTTACGTACGTACTTTATGGATGACCCCTAGATAAACTAATT
GATTATATTTCGGGCAAACATTTTAATTGACTGTGTTCATTTCTTCACTT
AACAGGGTCAAGCAACAGACATTGAGATTCAAGCCAAagagattttaaaa
ttgaaatcaatGTTGAACGAGATATACAGCAAGCACACTGGACAAGACGT
CAATGTCATCGGTAAATCTGCTCATTTCTCATTTTGTCAGTAGCGATAGA
TaggcttttcataaattatgtcacgACCAACTCGCGCCTCGCGCTTTTTA
TAATAATGGGCTGTTCCAGAAATAGTCTTTACCcgctatgttgaggaggt
gtgacgtccagggtggtctggaaaataaaaaatccagggtggtctggttt
ttcaaatgtaaaaattggtcagtaaaatgaggtgggAAATCCAGGATGGT
AAGTAAAGCGGGgacaaaaatccagggtggtcaaaaaaaggagaaaaaaa
atacaatagagtcctgaaaaataaaaaaaaaaattcaaggggggggTCAC
CTTTCTCAAAAacgacctcctcaacataggggtcacaatttttttctgaa
atagccCAATGGTGTACTTTGAATGAgagtcaagtattcttaagaaattg
aggagtgaaatattcttaacgtattcttacttttttagacttgacttttt
tacaaacatgaaaaatgataaatttgagAGTTTGAGACTATCGAGTGTAC
TTTGGAagctaaaattatatttctgcctcaaagtttcaaatttatagggt
attcttacgattttgCCAagttcaccctgatattctcaCAGAACATGTTC
TAATAAATAAGTGTGTATTGCTATGAGAACTTATCCCATCGGAATCTTTT
AGAggtgttttcttttcattaaaaaatccaAGAGTCTCAAGAGAGatata
tcattttattttagCTGTGACGTCTTTTGAGATATGACAATCTAAAGTAT
ctaaaaatgggttcttacacggCTCTACGCCAAAActctattgtcttttt
gttaAATGTATATGACTTGTAACTTATTCATCTAGATTTTTTAGTTAGta
aggcaaaaatattttgaggcttTTCTTAGGACAATAGAAGGAATCTTCgg
caaaaaaaatctcaaaccatcttTAAAACATCCCAATTACAATGCCTGTA
GTTGGCTTTTATTGTGTTGACGCAATTAAACAACtttcttcaaaatattc
ttattttcatctttcaTAGAGGAAAAACTGGACCGCGATAATTTTATGTC
GCCTGAAGAAGCGAAAACCTTCGGTGTTGTCGACCACGTGCTTAACCAAA
CTCCCGTTGCTACGGACAACCAAGATAACAAAGATGGCAGCGAAAAgtaa
Coding sequence (CDS) from alignment at sc0000154_pilon:465060..469959+ >XLOC_036815 ID=XLOC_036815|Name=XLOC_036815|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1410bp|location=Sequence derived from alignment at sc0000154_pilon:465060..469959+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTACTTAGATATACAAAGATGCTACTTAGATATACAAAGcCTCTTCT
TCGCACGGCGACATGCGGCTGTTTTATGACGAGGTcagcattacgtaatg
tttcGTATATCCCGATGGTCGTGGAGCAAAGTcCTCTTCTTCGCACGGCG
ACATGCGGCTGTTTTATGACGAGGTcagcattacgtaatgtttcGTATAT
CCCGATGGTCGTGGAGCAAAGTGGTCGGACAGAACGTTCATATGATATCT
ACTCGAGGCTTTTAAAAGAACGAATCATCTGCCTGTTTGGTCCCGGTCGG
ACAGAACGTTCATATGATATCTACTCGAGGCTTTTAAAAGAACGAATCAT
CTGCCTGTTTGGTCCCATCAATGACACTGTATCGAGCTTGATCGTGGCTC
AGTTGTTATTTTTACAATCGGAGAGCAGCAAGAAACCAATTCACATGTAC
ATCAACAGTCCAGATCAATGACACTGTATCGAGCTTGATCGTGGCTCAGT
TGTTATTTTTACAATCGGAGAGCAGCAAGAAACCAATTCACATGTACATC
AACAGTCCAGGAGGAGTTGTGACGGCAGGTCTTGCAATTTACGACACAAT
GCAGGAGGAGTTGTGACGGCAGGTCTTGCAATTTACGACACAATGCAGta
cATCCAACCTCCAGTAGCGACATGGTGTGTGGGACAAGCTTGCAGTATGG
GGTCCCTCCTCCTCGCTTCTGGTGCACCAGGGTTACGTCACGCTCTTCCC
CACTCACGGATCATGCTACATCAACCGCACGGTGGAGCGCAGtacATCCA
ACCTCCAGTAGCGACATGGTGTGTGGGACAAGCTTGCAGTATGGGGTCCC
TCCTCCTCGCTTCTGGTGCACCAGGGTTACGTCACGCTCTTCCCCACTCA
CGGATCATGCTACATCAACCGCACGGTGGAGCGCAGGGTCAAGCAACAGA
CATTGAGATTCAAGCCAAagagattttaaaattgaaatcaatGTTGAACG
AGATATACAGCAAGCACACTGGACAAGACGTCAATGTCATCGGGTCAAGC
AACAGACATTGAGATTCAAGCCAAagagattttaaaattgaaatcaatGT
TGAACGAGATATACAGCAAGCACACTGGACAAGACGTCAATGTCATCGAG
GAAAAACTGGACCGCGATAATTTTATGTCGCCTGAAGAAGCGAAAACCTT
CGGTGTTGTCGACCACGTGCTTAACCAAACTCCCGTTGCTACGGACAACC
AAGATAACAAAGATGGCAGCGAAAAgtaaAGGAAAAACTGGACCGCGATA
ATTTTATGTCGCCTGAAGAAGCGAAAACCTTCGGTGTTGTCGACCACGTG
CTTAACCAAACTCCCGTTGCTACGGACAACCAAGATAACAAAGATGGCAG
CGAAAAgtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:465060..469959 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 577-705:4772 |
| Aaloc | 469-573:3606 |
| Aaloc | 325-468:2741 |
| Aaloc | 283-324:2232 |
| Aaloc | 184-279:1430 |
| Aaloc | 112-183:903 |
| Aaloc | 22-111:296 |
| Aaloc | 1-21:1 |
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