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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:439997..446967+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036813 ID=XLOC_036813|Name=XLOC_036813|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6971bp|location=Sequence derived from alignment at sc0000154_pilon:439997..446967+ (Clytia hemisphaerica_ch_hm2_pilon)
GCGTTCGTATCGACCGTAGGAATCGACTTCAAAGTACAGACAGTTTTTAG
GAATGACAAACGAATCAAGCTACAAATTTGGGATACAGGTTTGTCATGCT
TCATTGATTTTAACCCTTTATCCAAGAAATAAGACTCTTTTTTATCTAAC
CTTCTGTGAAATTTAGGATGTCACCAATTACTTTTATTCAGGTCTTCCAT
TGCTCACATTTTTTCAGATGTGAGAGCTAAGACACGATGtcatttttttg
gaataaaacTCCACCAGCACGACTCCAGCAtaaattttcaccaaagttta
cttttattattgttgttgtttcccTGGTAACCACTGAGACGTGAAGTTAC
AAACAAAGAAGCTGCGATCGATGGAGATTTTGCATGCTAGACCTACAGCG
GTGTTTCACTCATACAAAATCGCCAGGTACAGACAACACAAAAGTAAAAC
TCAAAATAGCAGCCAAGCTAACActggcagtgtagacctaaagctctaaa
acagcatctaataacatgaaaaccagaatatgattcttcaatgggaatca
aaactataaagtgcacttacaaacatcaatttgtcagatctaacaaaatt
aggggccgtcgacaaacgattttccttttttttaacggcttctggccgta
aggggtgggagggggtcactgcaatgccgttaaaaaagtttaaaaaaaag
gaaagtctcacttacaaatttcatcagtccaAAAAATAGAAACATGTGAA
GAAAGGCTAAGACCAAAGCAACCACACGACATTCACCTTATTCCCGGTGT
CACCAATTAATGCTTCGACGAGAAAAATGACTGGTCACGTGACGAAAGTC
GGCGATTTTTCCCTCCGCCTCAGTTGACtccttgctccacccatcccgcC
CTGACTTGCTGCGGGGcttggagtttcaaaattgaaaggtcacggctcaa
aaccacatgtttttccgtgcgaaaagaagaactttgaggattacgaatcg
aaagaacatggcggccatggaccagtgaaagtatttacttttgaagaatt
ttcttggCCGCTAAGACgtagggggggagggggtctgaaccttaacggcc
tcaggccgttaaaaaaaaggaaagtcgtttgtcgacggccccttaataac
tgcactgtcatcattgacaataaaacaaacgattctctgtcaagagcctt
gtaaacattccaacaacttccatcgaaatgatctatcacagctcagtcta
ccatttttagcgcggtccgaggattgagccgagaacgctctgCAAACTCC
Tgtgcgggtgaaaaacttcaatctgtcaatcattttctcaagcgaagagt
acgcgaagccgttctagctttacgatagtgccgcgggtcatcaatggata
gtattcaattatcattatccctttactttcatttctagaacttttgcaaa
aaaaaggaaaaatagaaaagttgtatttcttactgctctattcacatact
gaatttgaaagatcttctatgtggcgtttttttgcaaacttcaaaaaact
gatttttgtcccgcctttgcgggactttggcttaagtgcttgagtgcagc
atagggtacaaagtcctaatatgcgtttcccgtaatttttgtatgaagag
ttaggtctacactgactgGGAAAAACAAATAATCAGGAGTTTTCAATCGT
TTACTACAGCAGAATAAGACAGTGAGTTGAGATGCAgtgaaataaaaagt
atataaacaaaccttgaacctttgcctgtccaaataaaaaagatattcaa
gCTGTAGTAATGTTTACATTCAGAAATAAATCTTTATTCCAACAGTCCTA
CAGCAAGGTTTTAAACCACGCTGCAACATTACTGGCATTGAGTTCTGAAC
TGAAAAATGTGGGTCCAGTTCCCTGGAAAGGGCGTAACTATTACACTTTC
CAAATGAATTgttccaaaaaattgaaatgaccTTTGTCTGTCTTCTCACA
ATCCAAAAATATAACTTGAAAAATCAGGACATGGGTAACTTTTTTATACA
ATAAACCATCAAATTGAACTTTATAGAGCTCAACGTTTAAATATCACTTG
TTTTCATAATAAATCAATGTTATTTATATCTATATATATTTGGCTCTTCA
AAACCGCTTCCCTTTGCTGCAACAGGCCTTAAAGTTCATATTGACCCCTG
GTTTTTACAGCAATAATCTAGAAAAGCCTTTAGTGCGACATAAACAAACA
AtttcattggttaaaaaatGTCAAGACATCACGCATGTATTAGTGCCCAT
CGTGGGTAGAAGCGCTTCAAGggtaaaattgcaaaattccAAGGACAGCA
TCTACGATCAGTCCATATCTACCATTTTCCTTTTCTGAAAAGTCAGTGAT
TTTGACAAGTTTACAACAACTTTAGTTTACCTTACCTTGGCCTTACCAAT
TGACCAAGCgcaatgtcatgttgaatattaaaaactccagcatcacAACA
ATTACACATGAAAGCATAATTTGTAAAGCACATGTATTTAAATATTTCTA
AGCaacgaaaaggtctatttcacaAAACATTGTCTTTCCAGATGTAAAAA
ATAAGGTCTTTAACACTATTGAATACTCAATCGTGTAACCAAAACACAGT
TGAGATCAGAGATTGGTGAAAACGTGCTCATTTTGTGTTTGAAGTGTATT
GTGTGATGAATGGATTAATGCTAGGCCTCTCattcaatttgaaatataag
aCTCAAAtcagaaatttgcaaaaaaaatttcaaaaacttttttttttctc
tcccCTAATTTTAGTTTTAGTAGGAACATCTATATGTAACAAATCTAAAA
TCTCTGTAACATTACTGCACAACTGAGATGAATAAACTCTTGCTTTTCTT
GATCAAGTAATGTGTACCCAAAACCTTTCTTAGTCTTGAATAAACTGTTA
TTAACACAATAAAGTGACAATTCTGAACTGGATCTCGAATTCTACAGGAA
CAGAATTAAGATGTTGATAATTTAAAGAACACTTTACATTGCACTAAGGT
CAGTCTGTGGAGCCAGAGCAATATTTGTGAACTCGACACAGGGATCCACC
ACATaaaatggatttattatagTCTTATTTGTGCCCAGGCCCTGAGaaat
tactttcattttttcaattagTTCACATGGGAGTGAAATGTTTAGAGAAT
CAGTACTAATATAAGTGCTTCAGCTTCAGAGAGCTTGATTGTCAAAACAC
TTTGCAGCTCTGGATTTTGGTCTGTTTACatttgttcaactttttttgta
cGTTGCTGGTTTTCATTCCAATTTGCTGATGctgaaatacaattttaaag
GCCCCACTCTAGGTGTAGGGGACAAGGCAAAGTTAAAAATTAAGTCAAAC
TTTTGGTACACAGTCAGAGTAAGAAGGAGGTAGCTTTTCAAACAATTAGA
TATTTTTGTACGATAGTTGAGCcaatgttttgctttaaaattaaatttgc
cACTTTTAGAAATCAATAACTTTGTTGAGGTTCATCGTTTACAAAGAATT
AAATCCTgtaaactgttttttattgcaaGGTTAGAACAACAACTCAAGac
caaaaatatctttcatctCCTGCTATCTTCATTCAAATTATTACAACaat
ttttatgataaaaagATGCCTGTGATTCCTTCAAAATAGCATGAACATTT
GCTAGTTTGTGCTGCTATATTcctaaagttttaaaaaaacttatgtCTCT
GAatttttggcattaaaattttctgacgattttgacagtttgttgataca
ggaaatttttatttttgttttgttttccaaCAAAGCCTACACATAAAGAA
TACAAATTTTTCTAAACCACCATTAATTTCGTTGAATTCAGAACGTTTAT
TTGCTCAACAAAGTGTTGGATCAGTCAAATTTTGGCCAGCCATAGATGCA
AacaatataaatttgatattttgaaaaaaaattatagacAGTTCATTCAG
GACAGTTATAGGCAGTTAAAAATTATCTTGATATTATCCCCTACCAGTTT
TAACTAATGCATTTTTGTTATGTGACTTTAGGAATAATGTACAAAGTATT
TATGTCAACAGAAATTTATTTCACGATGATAAATGTTTGATAGTTAAGAA
AGTAATATAACAAAGTTGACACTTTGAATCTCAAAAGTGTAATTGTTTTA
TGTACTATTAAAGCTTGTGAAGTTAATTTCTGTCTCGTAGAGTTTAAAAT
CTTCTGCACACTTCAtaaaaatgaatgacctggcatCTTGTACGAAGGTA
TTTTTTGAAGATAAAGATATGGTAGGATTAGTGTTTTACTTTAGGTGTAT
CAGTGAAGTATTttcttctcatcatttttctttCGCATGTGATTTCTGCT
ATttgtttaaatgaaaaaattgaagtaGAATCTGAATTTATAACACCAAC
CTGATTACATACAATTTTCGTTGCTAAGATATTTCTAAGGTTCATGTGAA
AATATGCtctgttaaaaaaatgaaatatatttgcaagtttttaatttcga
aaatatatctctttttttcaaaaattatttttttagagattttaatcAGT
TAGTTATGCAAAAGTACATTAAAAGTTTCCAGACATTTTTAATCTATTGT
TTCATGAAATAAGTAGCTTACAAACTTCTACCCATCTTTTACAGTACATG
CACAGTTTTTAAAACGTTTATCTCTACAATAGGTGTCATGCAGGGAACAG
AGGTTTTTGTAAAAACTTGAAAAGGCATACTGTGTGATAATCTGCTCTTT
TATCATCCAACCTCTGCTGTAAAGTGTTTTATAGTTGAGAGCAATTAAAC
AAATGCTAATGAGATCTGTTTTGCATTTTCTCTCATGTCAAGTACACgtt
ttaagaacataaggcttcgatggctaaaatgttgagaacaagtttagaac
attttaaggctttgtagactgaATAACACCCAAATTCTTAggtaaattga
caaaaatacttataaaatggtcaaaataggaacatgttaagaacgctttt
agttttaaaactcaaaaagttaagaacatctgaaggcttcaaaattttta
gatgttcttataaaaaagcgtttaagTTCAAAGAACAGAAAATAAGTGTA
AACATGCTTGATACCTACCCTTCTAAACTCTATCTCAAAAGTATGTTACA
CAACACCATCTCTGGCATCGCCCACGCTGATGCTATATTAAAAtaaattg
gaaagatatttctaagaagaaaatcaaatagatgtaagattatttggaaa
ttaaaaaagaggaaaaagaaaatgaagacgaaaaaatgaaggttttttaC
TTTCTACTTTTAAATCATTAGAATATTTGAGCCCCGCTTTTTCGAAACTG
CGTGCattcaaatttttccttttttggggGGAAAAAGTTACAAGCCTTTG
AAGTAGCCAAAAAATCGCCTAAATTAACAAAGATAGATTTGCTTTAAAAC
AGACTTCAAAATCTCTCATTAACAGAAATTTGTCTATGTTTAAGTATTtc
taaagtaaaaagtaaaaccCTTTGTCacctaaaaaatataaagaatgTCT
TCTATAAAGTAATGAAGTTTCGACCCTTTACTGACTTGACTTGGAATAAG
CCAATCTATACAAGCCCGTTGACACCATACAGTATTGATCTGAGGATaga
aatctttcaaattatgCGGTCTTGTACGCTCACTTTCTGATTGATTAAAC
TACGGAAGTACTGTCGTACGTACGGgattggtcttcttcgttcaaAAAAG
AGCCGTAAAATGCGACGATTAATGTAGAGAACATCAGTTTGTAGGAGACG
GTTGAAATATAAAGAAGTGTCAGTTGGAGTGGAATTAGGCTAACAGCGTT
GTTTCTGTTGAACCTgatattatcaaaaataatctccttttgttttaaag
tttgttcTATAGCCTTGAAAGTTTTTATGTTTACAATGCagatcaacttc
ttcaatataTAAAACTTGTTATCACTCTTCATCTTTCAGCGGGACAAGAG
CGTTACCGAACGATCACGACGGCGTATTACCGTGGCGCGATGGGTTTCAT
TCTAATGTACGATATCACGAACGAAGAATCTTTCAAAGCTGTCACCGATT
GGTACGTCATCATCTCCCTTTTCTTTCGTATAGCCCTCCAATAGGATGCT
TTGAGCCCAATTACAGTAATTAATTAatgcaccttttcgactgtagccgc
caattgACGCGCAGGCATTCTTTATCCGTTTTACCATCCTAAAACCGTCG
CAGTCttttttttcacacctatagaaaatagaaaaaggtATACATGGGAA
TAACTTATCAGAGCAAAGACTTTAGATACAAAACTCCAactttcgggtca
gggctgggaaGCATTCTGGCCCATTTACTGAAAGAAATTCCTTCACCaac
cctgatattataccatgcTTGTTGAGTGAAAGGCTATCGTTTGCCATTAT
TAGATTACTGAAAAAGCTTTTTCGCTTTACGCGatagtaaaaaaaattgg
ccAGTTTGAGCCCTCGAGCCTTAGCTGATGTGTAACCTTTATCTTCTGTT
TCACGTTTTTTATATCAGTAcaagtgtgactaactgctttACTGCTTTTT
AGGGCGAGCCAAGTGAAAACATATTCGTGGGACAATACACAAGTTGTTTT
GGTGGGTAATAAATGCGACATGGAGGAAGAGCGCGCGGTCACGTACGAAC
AAGGCCGTAAATTGGGGGACCAGCTGGGTTTCCCTTTCTTCGAAGCGTCG
GCCAAAGACAACGTGAACGTTCGCGACGCGTTCGATAAGTTAGTGGACGT
GATTTGTGAACGAATGACGGATGCGATCGATGGGGATCTTATCCCTGGCA
ATGGAACAAAACCTGGTACTACTGACCTCAAATCAAAACCCAATCAAAGC
GAAGGCGGGTGTGCTTGCTGA Coding sequence (CDS) from alignment at sc0000154_pilon:439997..446967+ >XLOC_036813 ID=XLOC_036813|Name=XLOC_036813|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000154_pilon:439997..446967+ (Clytia hemisphaerica_ch_hm2_pilon)
GCGTTCGTATCGACCGTAGGAATCGACTTCAAAGTACAGACAGTTTTTAG
GAATGACAAACGAATCAAGCTACAAATTTGGGATACAGGCGTTCGTATCG
ACCGTAGGAATCGACTTCAAAGTACAGACAGTTTTTAGGAATGACAAACG
AATCAAGCTACAAATTTGGGATACAGCGGGACAAGAGCGTTACCGAACGA
TCACGACGGCGTATTACCGTGGCGCGATGGGTTTCATTCTAATGTACGAT
ATCACGAACGAAGAATCTTTCAAAGCTGTCACCGATTGCGGGACAAGAGC
GTTACCGAACGATCACGACGGCGTATTACCGTGGCGCGATGGGTTTCATT
CTAATGTACGATATCACGAACGAAGAATCTTTCAAAGCTGTCACCGATTG
GGCGAGCCAAGTGAAAACATATTCGTGGGACAATACACAAGTTGTTTTGG
TGGGTAATAAATGCGACATGGAGGAAGAGCGCGCGGTCACGTACGAACAA
GGCCGTAAATTGGGGGACCAGCTGGGTTTCCCTTTCTTCGAAGCGTCGGC
CAAAGACAACGTGAACGTTCGCGACGCGTTCGATAAGTTAGTGGACGTGA
TTTGTGAACGAATGACGGATGCGATCGATGGGGATCTTATCCCTGGCAAT
GGAACAAAACCTGGTACTACTGACCTCAAATCAAAACCCAATCAAAGCGA
AGGCGGGTGTGCTTGCTGAGGCGAGCCAAGTGAAAACATATTCGTGGGAC
AATACACAAGTTGTTTTGGTGGGTAATAAATGCGACATGGAGGAAGAGCG
CGCGGTCACGTACGAACAAGGCCGTAAATTGGGGGACCAGCTGGGTTTCC
CTTTCTTCGAAGCGTCGGCCAAAGACAACGTGAACGTTCGCGACGCGTTC
GATAAGTTAGTGGACGTGATTTGTGAACGAATGACGGATGCGATCGATGG
GGATCTTATCCCTGGCAATGGAACAAAACCTGGTACTACTGACCTCAAAT
CAAAACCCAATCAAAGCGAAGGCGGGTGTGCTTGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:439997..446967 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 511-531:6951 |
| Aaloc | 211-507:6654 |
| Aaloc | 100-207:6042 |
| Aaloc | 10-96:1 |
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