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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:392917..394609+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036807 ID=XLOC_036807|Name=XLOC_036807|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1693bp|location=Sequence derived from alignment at sc0000154_pilon:392917..394609+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCATGGAAGATagagagaaaaatgaaattaatctgTTGTTGGAAAATAT
TGATGATGAAATAGAAGTAATTATTGAAGATCACAATAAACTTATTGGTT
TGAGTGCAGAAGAGTTGGAAGAAATATTTTCTGAAGAATTCGACCTTGAA
GAAATACCATCCCTTCAAGATcatgaagaaaacaaaacacCACCACAAAC
TACCACAACAGAAGTAGAGCCTGAGGCCCCAGTTACAAagaaacacaaaa
caaaatcaCCTCCCAAGTTCGTTTGTGATAAATGTAAATTGAAGTATGTT
CGACAATCTGCTTATGAGAAGCACTTATCAAAGTGTCTTTCTGAAGGAGT
TTTGGTTATTGAAAAAGGTAAAGAATTATGCCTGCCCATGGATTCAGACt
ttgctatttttgttatgtgttattcttttacttttttgatttttttttca
tggtcCATGATATGATTTTTGCTTGCCTTGCCTTGCCTGCACTCActgtt
ttgtttgtaatttgtaCGTACTTTTATAGAAAATTGTTACAATTTAAAAT
GATAAACCAAAAAATATACTGAACTGTAATTCCCATTCGCAGATCTGAGt
aaggaaaaacttttttctttatttctcagaACTATTGTCCAACGTATTAA
TGGAAGAGTACAATAAGGAAGGACCAACCATGCTgaccaaaagttttgaa
atggtGAAGGGCAATAAAGTCTTCATGATTCAAAGGGAAAGCAGAGAGAC
TCTTGGAAACAAAGCTCTAAAACTTGCTACAACCATCCTCACAAAAAAGG
AAACCACCGACTTCAAAGATTTTGCCTCAATGTTGTCCAAATTTTGTATA
GGACTCCTCCAACTGAAGACCAACAAAGCTGCTGCGCGTGAAACCATCAG
TACTACACTTCACCGTACCtgcaaaaatgaaagttttaaaaatgcaaTGT
CAAAACTGGCAGTGAATGTTGACGAGGAGGTTTCACTGTTTTTGTTGAAC
AACATTTTTAAGAGTTTTTTCCAGCTTTCCTTGACTTGGAGGAATGATAA
GTTATTAACGcggaattttaatgaaattgatGTCAAGTTGTCATCACAAG
AGCAGAAAACTCTGCGGTATGTTGCTGGTTTCATACCATTTTCCCtctca
aaaagatttaaaaatagACAAGACACTGATATGGGAAAAGTTGTCGTGGA
AACTATTGAAACGTGGCGTGCTAATcccaatgaaaataaaaaatcttttt
tggaattttcaaaatcctGGACCGAAAGGGTAAACCGTGGTGGATTATTC
CAAGTTAATGAtgatttttatatatttattcGGAGAGTTGAAAATATGGC
AAGGACTGTCCTGAATAGCAATTTAATCCTAAACTATAAAGGAGAAGATT
TGAGAGAGGTGTTACTTGAGAAGCTCAATCAAAACGAATTGGTGGATTTA
GGCTGGATAGCATTGACTAAGTCTATACAATGTGATGGAATGAAAAAAGC
TCTCAAGAACATTATTTTGAGAAAGTGGGTTTCACTCAGAGCCAAGTCAT
TTCTAAACTGCTGGATCCGAATGTTAAagaggaaaaaacaaaatatttca
gaaaagaGTGAGCCCTCTATGAGAAAGTCTTTACATGGAAAAGGGAAAAG
TGGTGATAAATCTGAACAGGATAAGGCAGAaagtaacaagtga Coding sequence (CDS) from alignment at sc0000154_pilon:392917..394609+ >XLOC_036807 ID=XLOC_036807|Name=XLOC_036807|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2862bp|location=Sequence derived from alignment at sc0000154_pilon:392917..394609+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCATGGAAGATagagagaaaaatgaaattaatctgTTGTTGGAAAATAT
TGATGATGAAATAGAAGTAATTATTGAAGATCACAATAAACTTATTGGTT
TGAGTGCAGAAGAGTTGGAAGAAATATTTTCTGAAGAATTCGACCTTGAA
GAAATACCATCCCTTCAAGATcatgaagaaaacaaaacacCACCACAAAC
TACCACAACAGAAGTAGAGCCTGAGGCCCCAGTTACAAagaaacacaaaa
caaaatcaCCTCCCAAGTTCGTTTGTGATAAATGTAAATTGAAGTATGTT
CGACAATCTGCTTATGAGAAGCACTTATCAAAGTGTCTTTCTGAAGGAGT
TTTGGTTATTGAAAAAGAGCATGGAAGATagagagaaaaatgaaattaat
ctgTTGTTGGAAAATATTGATGATGAAATAGAAGTAATTATTGAAGATCA
CAATAAACTTATTGGTTTGAGTGCAGAAGAGTTGGAAGAAATATTTTCTG
AAGAATTCGACCTTGAAGAAATACCATCCCTTCAAGATcatgaagaaaac
aaaacacCACCACAAACTACCACAACAGAAGTAGAGCCTGAGGCCCCAGT
TACAAagaaacacaaaacaaaatcaCCTCCCAAGTTCGTTTGTGATAAAT
GTAAATTGAAGTATGTTCGACAATCTGCTTATGAGAAGCACTTATCAAAG
TGTCTTTCTGAAGGAGTTTTGGTTATTGAAAAAGaACTATTGTCCAACGT
ATTAATGGAAGAGTACAATAAGGAAGGACCAACCATGCTgaccaaaagtt
ttgaaatggtGAAGGGCAATAAAGTCTTCATGATTCAAAGGGAAAGCAGA
GAGACTCTTGGAAACAAAGCTCTAAAACTTGCTACAACCATCCTCACAAA
AAAGGAAACCACCGACTTCAAAGATTTTGCCTCAATGTTGTCCAAATTTT
GTATAGGACTCCTCCAACTGAAGACCAACAAAGCTGCTGCGCGTGAAACC
ATCAGTACTACACTTCACCGTACCtgcaaaaatgaaagttttaaaaatgc
aaTGTCAAAACTGGCAGTGAATGTTGACGAGGAGGTTTCACTGTTTTTGT
TGAACAACATTTTTAAGAGTTTTTTCCAGCTTTCCTTGACTTGGAGGAAT
GATAAGTTATTAACGcggaattttaatgaaattgatGTCAAGTTGTCATC
ACAAGAGCAGAAAACTCTGCGGTATGTTGCTGGTTTCATACCATTTTCCC
tctcaaaaagatttaaaaatagACAAGACACTGATATGGGAAAAGTTGTC
GTGGAAACTATTGAAACGTGGCGTGCTAATcccaatgaaaataaaaaatc
ttttttggaattttcaaaatcctGGACCGAAAGGGTAAACCGTGGTGGAT
TATTCCAAGTTAATGAtgatttttatatatttattcGGAGAGTTGAAAAT
ATGGCAAGGACTGTCCTGAATAGCAATTTAATCCTAAACTATAAAGGAGA
AGATTTGAGAGAGGTGTTACTTGAGAAGCTCAATCAAAACGAATTGGTGG
ATTTAGGCTGGATAGCATTGACTAAGTCTATACAATGTGATGGAATGAAA
AAAGCTCTCAAGAACATTATTTTGAGAAAGTGGGTTTCACTCAGAGCCAA
GTCATTTCTAAACTGCTGGATCCGAATGTTAAagaggaaaaaacaaaata
tttcagaaaagaGTGAGCCCTCTATGAGAAAGTCTTTACATGGAAAAGGG
AAAAGTGGTGATAAATCTGAACAGGATAAGGCAGAaagtaacaagtgaaA
CTATTGTCCAACGTATTAATGGAAGAGTACAATAAGGAAGGACCAACCAT
GCTgaccaaaagttttgaaatggtGAAGGGCAATAAAGTCTTCATGATTC
AAAGGGAAAGCAGAGAGACTCTTGGAAACAAAGCTCTAAAACTTGCTACA
ACCATCCTCACAAAAAAGGAAACCACCGACTTCAAAGATTTTGCCTCAAT
GTTGTCCAAATTTTGTATAGGACTCCTCCAACTGAAGACCAACAAAGCTG
CTGCGCGTGAAACCATCAGTACTACACTTCACCGTACCtgcaaaaatgaa
agttttaaaaatgcaaTGTCAAAACTGGCAGTGAATGTTGACGAGGAGGT
TTCACTGTTTTTGTTGAACAACATTTTTAAGAGTTTTTTCCAGCTTTCCT
TGACTTGGAGGAATGATAAGTTATTAACGcggaattttaatgaaattgat
GTCAAGTTGTCATCACAAGAGCAGAAAACTCTGCGGTATGTTGCTGGTTT
CATACCATTTTCCCtctcaaaaagatttaaaaatagACAAGACACTGATA
TGGGAAAAGTTGTCGTGGAAACTATTGAAACGTGGCGTGCTAATcccaat
gaaaataaaaaatcttttttggaattttcaaaatcctGGACCGAAAGGGT
AAACCGTGGTGGATTATTCCAAGTTAATGAtgatttttatatatttattc
GGAGAGTTGAAAATATGGCAAGGACTGTCCTGAATAGCAATTTAATCCTA
AACTATAAAGGAGAAGATTTGAGAGAGGTGTTACTTGAGAAGCTCAATCA
AAACGAATTGGTGGATTTAGGCTGGATAGCATTGACTAAGTCTATACAAT
GTGATGGAATGAAAAAAGCTCTCAAGAACATTATTTTGAGAAAGTGGGTT
TCACTCAGAGCCAAGTCATTTCTAAACTGCTGGATCCGAATGTTAAagag
gaaaaaacaaaatatttcagaaaagaGTGAGCCCTCTATGAGAAAGTCTT
TACATGGAAAAGGGAAAAGTGGTGATAAATCTGAACAGGATAAGGCAGAa
agtaacaagtga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:392917..394609 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 370-1431:632 |
| Aaloc | 1-366:1 |
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