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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:375959..383607+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036806 ID=XLOC_036806|Name=XLOC_036806|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7649bp|location=Sequence derived from alignment at sc0000154_pilon:375959..383607+ (Clytia hemisphaerica_ch_hm2_pilon)
GCACAAGATGGAGTCAGCAAATTTGAGGGATTTGGAGTTGATTTCAAATG
TAAAGTATGTGGAAAAGTTTTTGTATTGAATTTGACGAATTAATTTTTCT
GTCCTAGAAAAATTGGACTGATTCTTAATAAAAAAGTAGAATCTACAAAC
CAAGAGTTCAATAAAAAAGAGTTTTAACAATGAGTTTTCATgttcaatca
aaagataaatTTAAGATTCCAAAGTactggtatgttttttttgtacaaaa
tgtTAAGCAAATAGATCaaaaaaaTCAAGTCTACATAAATCATAGAggat
ttgttatttttattattatgttCTCACTCTTTTGGGACGCACTATTCTAT
AGTAAAAAGAAATCAGACAAGCACTTTTAACATTATCaaaatttgttact
ttttttcgttttttccaGTTAATTGGCTGCACAGATGTTCCTGCAGCAAG
GGGAGATGATATCTGCCAATCTGCAATGACCAAACTGAAGGTATTCACTG
CTTGAGTATAAAcaatttggaaatttctttttattcatagaattatattc
cacaggtctatcgacctctacgaaataatttacatttataaatattgtct
aattcttcatctgtcgtccagtcgtcagaagatatggacagagaagacgt
tgttttggtctttgtcctaggttttcgaaataggcgaaggtttgttctag
tgcttcctcttacatgccaaacgaaattaTCATTTTCTACATTCATTTTC
Tttgccttttggcacatatctttaataatttttctttcgttgatggtgaa
gtcgtctgtaatgctaaagccaccaatttcgttgaatcgtttcagcttat
gcagattttgcattatccgttttttttCCtccatactttttaagatcaac
ttgattggacgccagTTGTAGccctttttctgttttgtccaatgcgatgg
tGGGACAGTTTGATATCTTGGACGCCAATGTTAtctagtataccttcaat
atctattttgtctttttcctgttgttcctctttcttatgtacctctaatt
ccaccattccatgtataatgatgtttcgttttcttgattcgatgtctctt
tcttcattcttattttcttgttggtgttctctcactactgatttgaaatt
atccttgtttttcttagttatttcaacagcgtatgttttttctgatgttt
tttctatgtatttcgtcgttagctttatttcttcttttataatctgcttg
ctttttatttcaaagtcagccatcttattggttaagatgctttcgatatc
gttcttaaggctgcggcTCCTGGCTAGCTGGTTTTCGAGCTTTTTAATGA
tgtcgtccttcttctcaatctccttctgcatcatatgatacgagttctca
cctattttactcattagagatcgtgttatccgcacgcaattctgacatag
atattatttgttataagtgttggcaaaaatttgcagctggTAAAGCGGTA
ATTATGTGCACTTGTTGTGTACCATGCGGTGACAGTTTCagcattttaga
cggttttggtcatcgtcatctgagcaggagggAGAGtacatgtttggttt
tgtttacagtagcttcttcaaatggttgtttttcttgctttttgtcagtt
ttttcgttcatgttttttcttcaatgtgtcctttttcaaaaaagtatact
tttgaaatacagtgtgtctctttaatttgattttcaaggggaatcgtaTT
TTTTCGAATAGTTACGTAACGAAAAGGAATGGGATCAACAGAATTCTAAC
CacacaaatgttttttttctacaagTTTGATTGATTAGCAACATGGTTCA
ATTTATTTTAGATGATTGCAGTACagaaaaacaaagagaagaaagaacat
aaacaaaaaatcacCGTCAATATTACTCTGAAAGGAATACGTATTCTAGA
TGAAACTACTGAGGTTTGTGTTATATGTTTGTGTTActttaaggggatta
attttcagggggattaaatttcgttgTTGAGCtaattcattaaatttcaa
gatttcGCAGGAACTTAATTCACGTAAAATTTCAAGATTGCGCAGGAACT
TAATTTcctgggacaagctggagtttttacaagctcttatttgatttgat
tggtcgttaagatgtaataaaagaatttattactttttctaaagaacacg
tcaTCTCTACCACTTTAAATGACTAGAGAcattattttcatgattttgtg
tctttttggacctacctccgggtgccccggtggaggtcctatgaattaac
ctctgtctgttcgtccgtccgtccgtccgtccgtccgtccgtccgtccgt
ccgttcgtctgttaccagcttttctcgagattggctcattagttttttct
gattttttgcacaaagatgcaaaatggcaatgggcaaaatgtgacggagt
ccgattttcgaaaaaaaatcatttcggAAAAACCgactttttggcatttt
ctcaagatttcatcattagttttttctgattttttgcacaaagatgcgta
ttagcaatccccaaaacttggccgagtcagatttttgagaaaaaatcttt
tctggtcgaaaatgccggaaatatgccggaaatcgctgtttttgcagatt
ttcatcggactttttccttatatttcgttgttttttcacacaaaaacatt
attaatagtaatgtccacgatcaagcatgattcaactgtcattaaaactg
atttttgaagccggaactttctaaaaatcgccggaacagccgattttcgc
cggaaaaacggtatttcttgaatttcttgagctgtactttatattttttc
atgaaattttgcacactgatgcaaaatgtcaatacctaaattgtggcgaa
gcccgattttcgaaaaaaattcatttccggccgaaaatgccggaaatatg
ccggaaaaactggtttttgtcattttctcgagattttatcattagttttt
tctgattttttgctcgaagatgcgtattaacaatgtccaaaacatggccg
agtctgatttttgagaaaaaaaattttccggcggaaaatgcctgaaatat
gccggaaatcgccgtttttctagattttcattagactttttccttataat
tggttgttttttcattcaaaaacattattaatagcaatgcccaccatcaa
gcacgtttcaattttcaataaaattgatttttgaagccggaactatttta
aaagtcgccggaacaacctattttcgccggaaagacagtatttcttgaat
ttctcgagctgtactttctatttttttatgaaattttgcacactgacgca
aaatgacaatacctaaaatgtgatggagccctaTTTTCGaagccggaaaa
accggttttttgacattttctcgaatttttattgttttttctgatttttt
acagaaagatgcgtattcgcaatgttcaaaacatggccgagttcgatttt
tgagaaaaaaatttttccggttgaaaattccggaaatcgccgtttttgca
gattttcattggattttttccttacatttctatttttttcacacaaaaac
attattgataacaatgctcaccatcaagcattgtcaataaaactgaattt
tgcgaccagaactttctatttagtttttctctacaacccttccctctccc
cctaccatcaatcaataatgaatttcttgcgttatgcattttcgctaaac
gctatgttttctgactgattttttttcatttttctccttgcattactgta
tctaactttcatcatcaggtaggtccatattAAGTCCCACGAAACTTTTA
TAGTAaactaatgaaagatttatattcGTTTGATTTCGTTACAGAGGATA
GACCATGCGCATCCCATCCATCGAATCTCCTTCATCAGTCATGACAATGA
TGACAAACGAACCTTTGCCTATATTGTCGGCACAAAAGAAGGATACAAAC
TCTTTGCCATCAAGTCCATGAAAGAGGTATTGAACTAAACTTCGCACCAT
GCCCTATTTTTAATGGTATTGTctcaaaaaatttattatttttgaagCAG
CACTCTTCAAGAAGAGATGTTTCAAATTTTAGCATAttattcaccaaaat
ttcaaggtattctTGTTTAAGATcaatttttccgtctcagacgaaaaacc
ttgctttggtCACTGCATTTCATATTTTGGTAGTGTCtaataaattttgt
tgttctTGAAGCACCACTGTCCAAAGAGAAACACAAGTACTTTTTCTGTT
TGTATCGATGATTAATGTATTAAACTTAACATTCCAGTtcgatcaaattt
gattttaaaatttgttcCTCAATTTGTAAGATCTTTTGAGAATATCCGCT
CAGGAtttttttATCTCTCTTTAACTTTGCTTGATTGAAAACCATCATAG
GCAGAGCAAATCACAAGCACGTTGAAATCACTATTCCAAGAAGTCTTTGA
ACGTTTCCAAGCCAAGAAACAAGAAGAGCAAGTGGAGGAAGCTACTGAAA
CAAAGGAGCAACCAGCTGTCGTGGAGACTCCTGTCGTCAATGAACAACCA
TCAACCAACAATGAAGGGAACTTCTTTGATGTCAATGAAGACGTATGATA
GGATCTTCTTTCTTAGAAATTAATTCTACAGTTTTGAACATCATTTCATT
TTGTCTTGTCTTTCTAGCCCTGGGTTAGGCgacccacttttcgccctgtc
TATATAAATGGTGAATAATGTTGATAGAAACTTGACTGTCTAAAGCCATT
GCATTGcctttttttgacgtcaatgcaatgacttgcAATCGGCCTACTTT
CTACCAACTTATCGCCTACTCAAgcaattagaatagacagggcaGAAAGT
CTGCCGTCTCAGCTAGACTTAGACGACCAACTTTTTCCCCTGCCTATTct
aaaagattgaaagaagataTTCCAGTGACGTAAAAAGAGGGCAAAGCATT
GACTTCAGACAGCCAACAATCTTGCGTTTCGTCTGTTCATGTTGCCTCTA
AAAGATTCTCATTCAAAGCCTTTATCCCCAAAAGAACTTTCCCTTCAAAT
ACATCAAAACATTGTTTGAACCTTTACAGATCAGTGTTTTAAAAGCTCTC
CCATCTCTGTGAAGTATCTGAAGATGTCTTTCTCAAAATTATGCATTATT
CACCAAAATTTTAAGTatatgtgctaatttgctgtgtaaaatccatttta
cagtgttaaaagtttttccgtctcaaacggatttccgtctcagcgaGGTC
TATAAAGAggtttttccgtctcaaaattcgacATAATTcatagaccagcg
tccgagattcaaaaaaggccttaaaaattgttttcgtagggcacccctta
gatcagggcaaatttttgatattatgctcctaatagggtgtagaatcgac
aaaaaaaatttgcccttcgaatctcctgcagttttcgagtgaatcgattt
ttagttaatcgatagaactcatcaagggtcccccctttactaacggtttt
ttcgaagtctgaaaatcaaatatctgagactaccaacggattcagcgtga
aaagtagataaagaaaatggggttatttgttaagtttcgaccacctgttg
ccgagaaatggcacttttaaggcgaaaaatcgaagTTTTTGGCGTTTtcc
gatgacgtcagcattttcctatgagcattttcagaaaagtcattcccaca
gctggatagccctgaaTtagtagtatccAaaaatggtatggtttgtcaac
tttcaatgtatagatctcgagataattcatttttaaggtggataattatg
ctgaaaaactgctgactcagcaaaaaatatcgataattttcaatatttaa
accaaaatatctcgagatctagacatcgaaagttaacaaaccataccatt
tttggatactactaattcagggctatccagctgtgggaatgactttttct
gaaaatgctcataggaaaatgctgacgtcatcggaaaacgccaaaaacgt
cgatttttcgccttaaaaatgccatttctcggcaccaggtggtcgaaact
taacaaataactccattttctttatctacttttcacgctgaatccgttgg
tagtctcagatatttgattttcagacttcgaaaaaaccgttagtaaaggg
gggacccttgataagttttATCGATTAACTAagaatcgattcactcgaaa
actgcaggagattcgaagggcaaattttttttgtcaattctacaccctat
taggagcataatatcaaaaatttgccctgatctaaggggtgccctacgaa
gtgacacaatccactgactcggccgctggtctatcaccaaaatatcaaga
atgtGCTATAGTTTGCTGCGTACAATCCATTTTCCATCTCAGACGAAaat
cttgctttgaccactgaacAGATatatcatttttgaattttcagccAACT
TACGACAATCCAAAAGATGCGTTTGGAGACTGGAACCAACTCAACGAACA
AATTCAAGTCATGCAAAACGTAAGACTTACTTTGACCTTAAAGTTGTTTA
GCAGGTCTGATTGTTTTGAGGCTTTGAATTGGAGAATGAGTTGATTGgaa
caaaattaaaaccaagttgccaaatcaaaaaataattgaaaattaacTTG
ACTTTTTAGACAAAATAGAAGGTATCGTATCATATAACAAGTATTCCAAC
AAAGACCAGCAaaattgttttagatttttccaCGGCAAAGGAACTTCTAC
TTTATCTTGTTTAACCTTTTTCAGGACCAACCATCAGATGGGTTTGACAT
GTTCGCCGACACTAACGGATATTCATCCACGACAACCAACGATCCCTTCG
GTGGTGATAACTTCACCAACAACTCCACGACAACTGACCAAAACCCCTTT
GATGACTCGTCCCCATTCAATGCGGTAGATCCTAAACAAAACTCTGCACA
AAAGGATCTTGATTTCTTTGCAGCACCATCCGTTCCTGCCCGCCCTGTTG
AACAACCGCCTACCCAACAAACTGATCAATTATACAGTGTCGTTCAACGG
CCTAACAAAACAGAAGACGATGCTCCGCTCCTCATAAATGACCCGTTCGC
TGAGCTTAAGAAGAATATCAACGAGATGcacaaacaaaaccaacaacaac
caccgcaaccacaattcggttatttcccacaacagcaaccaaTGAACGGA
ACAACTTCGCCTTTCCAGCAACAACAAGGGAACCCTTTCGCAAACACTCA
ATCCTTTGGTGGTATGCAACAACAAAATCCTTACCAGCAACCGATCGTTC
CACCCCGCCCAGTTGCCGCAACGCCCGCTCCAAACCCTTTTACCACCACT
TTACCAGCGGCGGCTCCACAAGATGAATTCGGGTGGACTGTCACTAAACC
GGTTGCTGCTCCTCGCAAGGCACCAACACCGGCTGCACCATCTAACCCAC
AATCCGATCCTTTTGCTTTCTTGAATAACCAAACAGGCCCCACAACAAAC
GCTCCTGTGGAAAGCAAACCAACCAACGGATTTCCAGCGCAATTCTCGAA
CACCTCTACTACGTCAGCTTCCAGTGATATCATGGACTTGCTTGGTTGA Coding sequence (CDS) from alignment at sc0000154_pilon:375959..383607+ >XLOC_036806 ID=XLOC_036806|Name=XLOC_036806|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2904bp|location=Sequence derived from alignment at sc0000154_pilon:375959..383607+ (Clytia hemisphaerica_ch_hm2_pilon)
GCACAAGATGGAGTCAGCAAATTTGAGGGATTTGGAGTTGATTTCAAATG
TAAAGCACAAGATGGAGTCAGCAAATTTGAGGGATTTGGAGTTGATTTCA
AATGTAAATTAATTGGCTGCACAGATGTTCCTGCAGCAAGGGGAGATGAT
ATCTGCCAATCTGCAATGACCAAACTGAAGTTAATTGGCTGCACAGATGT
TCCTGCAGCAAGGGGAGATGATATCTGCCAATCTGCAATGACCAAACTGA
AGATGATTGCAGTACagaaaaacaaagagaagaaagaacataaacaaaaa
atcacCGTCAATATTACTCTGAAAGGAATACGTATTCTAGATGAAACTAC
TGAGATGATTGCAGTACagaaaaacaaagagaagaaagaacataaacaaa
aaatcacCGTCAATATTACTCTGAAAGGAATACGTATTCTAGATGAAACT
ACTGAGAGGATAGACCATGCGCATCCCATCCATCGAATCTCCTTCATCAG
TCATGACAATGATGACAAACGAACCTTTGCCTATATTGTCGGCACAAAAG
AAGGATACAAACTCTTTGCCATCAAGTCCATGAAAGAGAGGATAGACCAT
GCGCATCCCATCCATCGAATCTCCTTCATCAGTCATGACAATGATGACAA
ACGAACCTTTGCCTATATTGTCGGCACAAAAGAAGGATACAAACTCTTTG
CCATCAAGTCCATGAAAGAGGCAGAGCAAATCACAAGCACGTTGAAATCA
CTATTCCAAGAAGTCTTTGAACGTTTCCAAGCCAAGAAACAAGAAGAGCA
AGTGGAGGAAGCTACTGAAACAAAGGAGCAACCAGCTGTCGTGGAGACTC
CTGTCGTCAATGAACAACCATCAACCAACAATGAAGGGAACTTCTTTGAT
GTCAATGAAGACGCAGAGCAAATCACAAGCACGTTGAAATCACTATTCCA
AGAAGTCTTTGAACGTTTCCAAGCCAAGAAACAAGAAGAGCAAGTGGAGG
AAGCTACTGAAACAAAGGAGCAACCAGCTGTCGTGGAGACTCCTGTCGTC
AATGAACAACCATCAACCAACAATGAAGGGAACTTCTTTGATGTCAATGA
AGACccAACTTACGACAATCCAAAAGATGCGTTTGGAGACTGGAACCAAC
TCAACGAACAAATTCAAGTCATGCAAAACccAACTTACGACAATCCAAAA
GATGCGTTTGGAGACTGGAACCAACTCAACGAACAAATTCAAGTCATGCA
AAACGACCAACCATCAGATGGGTTTGACATGTTCGCCGACACTAACGGAT
ATTCATCCACGACAACCAACGATCCCTTCGGTGGTGATAACTTCACCAAC
AACTCCACGACAACTGACCAAAACCCCTTTGATGACTCGTCCCCATTCAA
TGCGGTAGATCCTAAACAAAACTCTGCACAAAAGGATCTTGATTTCTTTG
CAGCACCATCCGTTCCTGCCCGCCCTGTTGAACAACCGCCTACCCAACAA
ACTGATCAATTATACAGTGTCGTTCAACGGCCTAACAAAACAGAAGACGA
TGCTCCGCTCCTCATAAATGACCCGTTCGCTGAGCTTAAGAAGAATATCA
ACGAGATGcacaaacaaaaccaacaacaaccaccgcaaccacaattcggt
tatttcccacaacagcaaccaaTGAACGGAACAACTTCGCCTTTCCAGCA
ACAACAAGGGAACCCTTTCGCAAACACTCAATCCTTTGGTGGTATGCAAC
AACAAAATCCTTACCAGCAACCGATCGTTCCACCCCGCCCAGTTGCCGCA
ACGCCCGCTCCAAACCCTTTTACCACCACTTTACCAGCGGCGGCTCCACA
AGATGAATTCGGGTGGACTGTCACTAAACCGGTTGCTGCTCCTCGCAAGG
CACCAACACCGGCTGCACCATCTAACCCACAATCCGATCCTTTTGCTTTC
TTGAATAACCAAACAGGCCCCACAACAAACGCTCCTGTGGAAAGCAAACC
AACCAACGGATTTCCAGCGCAATTCTCGAACACCTCTACTACGTCAGCTT
CCAGTGATATCATGGACTTGCTTGGTTGAGACCAACCATCAGATGGGTTT
GACATGTTCGCCGACACTAACGGATATTCATCCACGACAACCAACGATCC
CTTCGGTGGTGATAACTTCACCAACAACTCCACGACAACTGACCAAAACC
CCTTTGATGACTCGTCCCCATTCAATGCGGTAGATCCTAAACAAAACTCT
GCACAAAAGGATCTTGATTTCTTTGCAGCACCATCCGTTCCTGCCCGCCC
TGTTGAACAACCGCCTACCCAACAAACTGATCAATTATACAGTGTCGTTC
AACGGCCTAACAAAACAGAAGACGATGCTCCGCTCCTCATAAATGACCCG
TTCGCTGAGCTTAAGAAGAATATCAACGAGATGcacaaacaaaaccaaca
acaaccaccgcaaccacaattcggttatttcccacaacagcaaccaaTGA
ACGGAACAACTTCGCCTTTCCAGCAACAACAAGGGAACCCTTTCGCAAAC
ACTCAATCCTTTGGTGGTATGCAACAACAAAATCCTTACCAGCAACCGAT
CGTTCCACCCCGCCCAGTTGCCGCAACGCCCGCTCCAAACCCTTTTACCA
CCACTTTACCAGCGGCGGCTCCACAAGATGAATTCGGGTGGACTGTCACT
AAACCGGTTGCTGCTCCTCGCAAGGCACCAACACCGGCTGCACCATCTAA
CCCACAATCCGATCCTTTTGCTTTCTTGAATAACCAAACAGGCCCCACAA
CAAACGCTCCTGTGGAAAGCAAACCAACCAACGGATTTCCAGCGCAATTC
TCGAACACCTCTACTACGTCAGCTTCCAGTGATATCATGGACTTGCTTGG
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:375959..383607 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-1470:6825 |
| Aaloc | 571-645:6495 |
| Aaloc | 379-570:4451 |
| Aaloc | 247-378:3895 |
| Aaloc | 145-246:1862 |
| Aaloc | 73-144:419 |
| Aaloc | 19-72:1 |
|
