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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000126_pilon:513062..517087- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036729 ID=XLOC_036729|Name=XLOC_036729|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4026bp|location=Sequence derived from alignment at sc0000126_pilon:513062..517087- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCAAGAACAGCCAGACAGTTATCCAAACAAACATGTACCATCAG
AAATGCAAGATTCAACTCTTCAAGCACAAGGGTAATAAACAGTTTTACGC
AATTTAAACGACATTATTACAAATTAGAATCACACATTTTAAAAATATCT
TGTTTTTTGCTCTTTTTCCTAACAAACAGCTATACTTCAGATAAAAATCA
ATTTCTAAACCTAATATCTAAAAGTAAATGCTCTATAAAAAAGAAATTAC
CAGATCACAGTCAAATTAATCCTTGAATTCGTTTTGACTTTTCAGAAAAC
AACACAATTGAAGAACATGTTGCAATCAAATGAATTGGAATTTTTGATGG
AAGCCCACAGTGGTTTATCTGCTAAGATTGTTGAGGAAGCAGGTAATGCA
AGAAATCAAAAAAGTGAAAGAACTAGAAAGAACAAACTCAAACATAAATG
AAATAATTTTAAAAAGAACATAATAACGAATATTTTAACCAAAAATTCTT
TCAGAATAGTTCAGAATGAGAAATCTTATAAGTGCAAGAAGATATCAAGA
CGTCAATTTCACAAACCCCTTCTCTACTTCTGTATTTTAGGTTTTAAAGG
TATTTGGGGCAGCGGCTTGTCTATTTCTGCTTCACTTGGTGTAAGAGACA
GTAACGAGGCCTCATGGACACAAGTATTGGATGTTTGTGAATATATGAGC
GATGCTTCTACTCTACCCATTTTGTTGGATGCAGACACTGGTTATGGAAA
TTTCAACAATGCCAGAAGGCTTGTCAAGAAATTGGAAGAAAGGGGCGTTG
CTGGGGCTTGCATGGAAGATAAACTTTTCCCTAAGACCAACTCTCTCCTT
GATGGCAGAGCACAGCCTTTGGCTGATGTTGAAGAATTTGCTTTGAAAAT
CAAAGCTTGCAAAGGTCACTATTTTTCTCTCCTTATGAAAAAAACAATAT
TTTAAGGTTTCCTTAGGTTAGAGAAAAGGGTTGATAGGGACCTATGCAGA
ACAACACAGAAAGTATTGGCTGTTCCAAATAAGTAGAATGTAAGAACTAA
CTTTTTATCTAATGTTGCCATAGTGATGTACAGCTCATATTAACAAAATC
ACTAGGAGATTCTGCGTAAGAAAGTATATTTACCCCCTAAAGTTTGCATT
AAAAAAAAACTAAAACAAAATAATTAGTCACACAACACTAATTGTGCAGA
TTTTTTAAATGTTTCAACAGTAGAAATCTATTAATTTGTAACATAGTTAA
CAACACAAGACCTAGTATATGACGAGCTGTATCTTAAGGGAAGAAATTTT
CGCAATATTTAATTTCGCGTTTTTTTTGACAAAGCCGTGAAATTAAATTC
AGCGAAACACGAATATGTATTCTCAGGATTTAAAAATTCACCTCTAAAAT
TGGTCATTTTAGGGCAAAATAGGCCATTTTGTAAACAAAAAAGTCCCTCA
ACTGCAAAAATTGAAATTCCGGAAATTCCGATTTGTGAACCGCATAATTA
AATTGTGCGAAAATATCTTCCTGCAAAAATTTCTTCCCTTAAAAGGTAAT
TCTATTGTTTTTAAAACAATGTTTTTCTATCTAGCAAACTCTTGGTTATT
CCTTTTGGGATAGTTTTTCTTTTTGATTTCAGATACTCAAAGAGATCCAG
ACTTTTGCATTGTTGCACGCGTAGAGGCTTTCATTGCTGGATGGGGCTTG
GAAGAAGCATTGAAAAGATCACACGCTTATGCTGATGCTGGGGCTGATGC
TATCTTGATGCACAGCAAGCTGAAAGAACCCTCTGAAATCAAAGCTTTCC
TTGATGCATGGGATGATAAAGTAAGTACACGTTTTTTCTTATAAGATCAA
ACTATATAAGAACATAAGGCTTCGATGGCCAAAATGCTAAGAACAAGTTA
GCTTTGCGGACGCTAATTTTTTTAGAAAAATGGACCAAAATACTCACAAA
ATGGTGAAATTAAGAACATCTTAAGAACATCTTAACTAAATTTTTTAGAA
ACATGGACCAAAATACTCACAAAATGGTGAAATTAAGAACATCTTGAGAA
CATCTTTAGGCTTAAAACTCAAAAAGTTAAGAACATCTGAGGGCTTTAAA
AAATTTGGACGTTCTTATAAAAAAAAACGTGTACCACAGATCCTCATTCA
TTATTGGGTCAGCTTGCATGACCTGAAAGTATAGCTTTTAATTTAAAGGT
TTTCTTTTTAGATAAGTGTTCCCGTTTCATATCAGACAGGACTGCAGTGT
CTTGCTATTGTTATGTTATGCTGATATAACCATAAAAAATTTTTTCTTTT
CCTCTTTCTGAGAAATCTTGCTCCACATCTGTGTCAATCCAATGTGAAAA
AGCTTGTGAATTAAAATTGATGAGTAAGCAAACGATATCACTCTTATTTA
AAAACAAAATCTTTAAGATAAATGGATCTTCTGGAAAGCTCGTTATATAT
TGAGAAATTGTATATTGTGAAATGAGTTGTCAGTTTCCCTCCATTTGTCT
CTTATTAAAGGAATTTTAAGCTTTCTGCCAATCTGCATTTTTAATCTGAA
AGAAAAATACCAATGAAAAAATTCTCACAAAGCTGTCCAATAGCTTATTA
ATTTAAATGGGCGTAATTTTTCAGGAGGACTCGACTGGGTGACTGGGTGA
CCCACGAGAAGCTTTGCGGACAGTTTTATTTACCTTTTATTTCGAGTAAA
AAACGTTGTTCAACTTTGCCCTTTAGATTCCTGTAGTGATCGTACCCACA
AATTATTACACAACCCCAACAAACGAATTCCGTGACTGGGGCGTTTCCAC
CGTGATCTGGGCCAACCACAACGTGAGAGCCAGCATCGATGCCATCCAAA
AAACAACCAATACTATCTTCAAAGAACAATCTTTAGAAAGCATCGAACCC
AATGTAAGCAACTTCTTCAATTCCATTTGAATTGATTTCCTGTCGATTCC
ACTTCTCATAAATATCCAATAGTCCAACAAACAAAATCAAAATGAAATTT
ACAAAGTTTTATGTTTCAAAAATATGAACGATCTATAATGCTACGTTATC
ATATTTAAAGATCTCACTATTTCTTTCCTGGGAAAGAATGGAGATTCAAT
TCTAGCCCTTTCGGGGCTTTACATCCAATGGGGTGAACCCCAATGAGGTT
TAAGCCCGAAGGGCTAGAAGCGAATATCCTTGATAGGATTTGAAGCCAAT
AAATCCTACTAAAGTCGCGCGGCCTAGCGCAGCCCGCCTAGTTTTTGCAC
AAATGCCAGATTTAAACTAAAATTTCCACTAAATTTTGAGAAAAATATCA
CTCGAAAACAAGGGAATTACGAACTAAAGTCTGTCCAGATATAATTGGCA
GTGGAAACAAGAATGCCTGTAACTTTTGATAGTCAAATATAATTATGAAA
ATAATAACCCCCGTTTTTAGTAATAAGTTGGAGATTTGATATTTCACAGA
AAAGTGCTACCAAGGGGTATTTCGGGTCCCATATCTTCCGAAGGACTTTT
CTGTTTGCCTTGAAATTTAACAAACTTCTTAACCTATGGTTGAACTACCA
CTGGTGTAAAAATGAACGTTATAGCATAAGTAGAAAAAAAGCTCAATTTT
TACAATCGCAAATTTAACCGCTAAAAATCGCGAATTTTTCAACCAAAAAT
ACATTCAAATATAGCGCTTTTGATTCTCTAAAACAAACAAAAAAAATTTC
CATAATTATAATATTTGACTATCAAAAGCTACAAGCATTTTTGTTTCCAC
TGCCAATTATATCTGGACAGACTTTAGATTCAATCTGTCGTCAAAAATAT
GACGCATAATTTAAGGCTTTACTTGCCCTTGCCTGTGAAAGGTAAAATAT
TCGCTTCTAGCCCTTCGGGCTTATACCTCATTGGTGATACCTCATTGGTG
AACCCATGCCACTCTAATTCCATTGTTTTGCGTCCATTTCAGGTGGTGAC
AGTGAAGGAAATCTTCCGTCTTCAAAACGATACCGAGTTAGTTGAAGCTG
AAAAAGTCTACCTCCCACAAAACTAG Coding sequence (CDS) from alignment at sc0000126_pilon:513062..517087- >XLOC_036729 ID=XLOC_036729|Name=XLOC_036729|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1902bp|location=Sequence derived from alignment at sc0000126_pilon:513062..517087- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCAAGAACAGCCAGACAGTTATCCAAACAAACATGTACCATCAG
AAATGCAAGATTCAACTCTTCAAGCACAAGGATGTTTTCAAGAACAGCCA
GACAGTTATCCAAACAAACATGTACCATCAGAAATGCAAGATTCAACTCT
TCAAGCACAAGGAAAACAACACAATTGAAGAACATGTTGCAATCAAATGA
ATTGGAATTTTTGATGGAAGCCCACAGTGGTTTATCTGCTAAGATTGTTG
AGGAAGCAGAAAACAACACAATTGAAGAACATGTTGCAATCAAATGAATT
GGAATTTTTGATGGAAGCCCACAGTGGTTTATCTGCTAAGATTGTTGAGG
AAGCAGGTTTTAAAGGTATTTGGGGCAGCGGCTTGTCTATTTCTGCTTCA
CTTGGTGTAAGAGACAGTAACGAGGCCTCATGGACACAAGTATTGGATGT
TTGTGAATATATGAGCGATGCTTCTACTCTACCCATTTTGTTGGATGCAG
ACACTGGTTATGGAAATTTCAACAATGCCAGAAGGCTTGTCAAGAAATTG
GAAGAAAGGGGCGTTGCTGGGGCTTGCATGGAAGATAAACTTTTCCCTAA
GACCAACTCTCTCCTTGATGGCAGAGCACAGCCTTTGGCTGATGTTGAAG
AATTTGCTTTGAAAATCAAAGCTTGCAAAGGTTTTAAAGGTATTTGGGGC
AGCGGCTTGTCTATTTCTGCTTCACTTGGTGTAAGAGACAGTAACGAGGC
CTCATGGACACAAGTATTGGATGTTTGTGAATATATGAGCGATGCTTCTA
CTCTACCCATTTTGTTGGATGCAGACACTGGTTATGGAAATTTCAACAAT
GCCAGAAGGCTTGTCAAGAAATTGGAAGAAAGGGGCGTTGCTGGGGCTTG
CATGGAAGATAAACTTTTCCCTAAGACCAACTCTCTCCTTGATGGCAGAG
CACAGCCTTTGGCTGATGTTGAAGAATTTGCTTTGAAAATCAAAGCTTGC
AAAGATACTCAAAGAGATCCAGACTTTTGCATTGTTGCACGCGTAGAGGC
TTTCATTGCTGGATGGGGCTTGGAAGAAGCATTGAAAAGATCACACGCTT
ATGCTGATGCTGGGGCTGATGCTATCTTGATGCACAGCAAGCTGAAAGAA
CCCTCTGAAATCAAAGCTTTCCTTGATGCATGGGATGATAAAATACTCAA
AGAGATCCAGACTTTTGCATTGTTGCACGCGTAGAGGCTTTCATTGCTGG
ATGGGGCTTGGAAGAAGCATTGAAAAGATCACACGCTTATGCTGATGCTG
GGGCTGATGCTATCTTGATGCACAGCAAGCTGAAAGAACCCTCTGAAATC
AAAGCTTTCCTTGATGCATGGGATGATAAAATTCCTGTAGTGATCGTACC
CACAAATTATTACACAACCCCAACAAACGAATTCCGTGACTGGGGCGTTT
CCACCGTGATCTGGGCCAACCACAACGTGAGAGCCAGCATCGATGCCATC
CAAAAAACAACCAATACTATCTTCAAAGAACAATCTTTAGAAAGCATCGA
ACCCAATATTCCTGTAGTGATCGTACCCACAAATTATTACACAACCCCAA
CAAACGAATTCCGTGACTGGGGCGTTTCCACCGTGATCTGGGCCAACCAC
AACGTGAGAGCCAGCATCGATGCCATCCAAAAAACAACCAATACTATCTT
CAAAGAACAATCTTTAGAAAGCATCGAACCCAATGTGGTGACAGTGAAGG
AAATCTTCCGTCTTCAAAACGATACCGAGTTAGTTGAAGCTGAAAAAGTC
TACCTCCCACAAAACTAGGTGGTGACAGTGAAGGAAATCTTCCGTCTTCA
AAACGATACCGAGTTAGTTGAAGCTGAAAAAGTCTACCTCCCACAAAACT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000126_pilon | genome | sc0000126_pilon:513062..517087 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 868-951:85 |
| Aaloc | 691-867:1301 |
| Aaloc | 505-690:2393 |
| Aaloc | 181-501:3435 |
| Aaloc | 82-177:3732 |
| Aaloc | 1-81:4027 |
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