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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000338_pilon:203895..212288- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036708 ID=XLOC_036708|Name=XLOC_036708|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8394bp|location=Sequence derived from alignment at sc0000338_pilon:203895..212288- (Clytia hemisphaerica_ch_hm2_pilon)
CAAAAGCACTGCACAGAAAGGAATGATATTTCTGATCCTTCATCACTCAT
GAAATTGGCAAATCAGTCTATTACAGCTAGAGCATGCATGTCTGTATACT
ACGAAATGTTTATTATGATTTGCAGGTGTCTTTTTATTTTATACTTATAC
TTACTTGGATACTTTTGGATGTGTTTGAGCGTACTGCTCTGGCAAGAATC
TTTTGATCCACACCACAATCTTCATTCAATCCATAATTCCTGAAGGAAGA
AATGGATCAGCAGAGAGATTTCATGTCTAAAATTGAGTTTGAGTCAACTC
TCCTGCACCCTGTATAACCACGGATTTGGGGTTCATCGGGAATTTTTTGC
AAGTGTTTGTCAAGTGCATTTTTGAATTTGTCAACAGTTAAATTTTTCAA
GTTTCTAATGCTCTTTGGCATTGCATTGAAAAGTTTTGCTCCTTGTATAG
TCAGGGTACTGTCGCGTAATTTTGAATTGTTTGGACCGGCGTATTTGCTA
AAACACATTCGTCCTAATCTTGGATGGTCAGTATAGACCTAACTCTTCAT
ACAAAAATTACGGGAAACGCATATTTGGACTTTGTACCCTTATGCTGCAC
TCAAGCACTTAAGCCAAAGCCCCGCAAAGGCGGGACAAAAATCAGTTTTT
TGAAGTTTGCAAAAAAATGCCACATAGAAGATCTTTCAAATTCAATAGAC
CCCTTTCATGTGATGTCATATGTTTTGGATTACCTTGTTTAGCCTAAATA
AAATATATTACAAATTTGGATGATAGAGGCAATATGCCTCCAACTTTGCC
TCCGAATTCTGTCTCTTTTATTCCAGATTTTGTTAAAAAAGACCATACAG
AAAAGAAGACTAAGCGAGAAAATCAAAACAAGCTGAAAAATTATGAAAGG
GGCAGGGGGGGGTCGGTAGTAAAATCTCAGACATATATGAGTAGTAAAAG
GATTTTTACGAATTTTTACATACCACCACCCAGACTCTTGGAAGAGGTAT
TTTACTACCCTGGTAGTAAAAGCTTTTGGGACAATTTGTCATGGAGACCA
CCTATTTTTTGGTTGCTTTTCGGACTGATTTTGCAAAAAAGCTAAAAAAT
TATTATTTCTGTGACACATTTTTCACGTAGTGCAAAAATTAATGTTTTTC
CCTTAGAATTAAAGTCTTTTTATATTGACAAAAAATTTCGAGAATTTTTT
GTTTGCAGCAAACAACTTTCCAACAGAAAATTTTTTCAAATTATAAAAAT
TTTCAGATTTTTTCAGAAAAGTCATCCAGAAAATTAAAAGAATTACAAAA
ATAGCTAAACTTTGCTAATTTTACCAGTTTTAACTACCCAGGTAGTAAAA
TTTTTTCAATATTTAACACATAGATACCACCCATTTTAGTATTTAACTAC
CCTGGGTAGTAAAATTTTTTTTCGATTTTTCGTCACACCACCACCGTAGT
AAACGTCATTATGTCTGAGATTTTACTACCGACCCCCCCCTGAAAGGGGT
CTATATGTGAATAGAGCAGTAAAAAATACAACTTTTCTATTTTTCCTTTT
TTTTGCAAAAGTTCTAGGAATGAAAATAAAGGGATAATGATAATTGAATA
CTATCCATTGATGATCCGCGGCACTATCGTAAAGCTAGAATCGCTTCGCG
TACTCTTCGCTTGAGAAAATGATTGACAGATTGAAGTTTTTCATCCCCGC
GGTGCGCGCCTCCTCGGACCGCACTAAAATGGTAGACTGAGCTGTGATAG
ATCATTTCGATGGAAGTTGTTGGAATGTTTACAAGGCTCTTGACAGAATA
TTGTTTGTTTTCATAGTTTGCAGAGGGGTATGAACCCCCCTAGGTTTATT
TCACCCCCCCCTATATACCCATCCCCCCCTTTTGTAATGAAATCTTATCC
CCCCTTTTTTTTTACAGAAAATCCGTTTCGAAGGAAACTCGCTTTCCCAC
CTACCAGCAAAATTATCAACAAGAAAGAGTATGAAGTATTATAGTCACGA
GCCAACAATGACAGAATATAACTAACTTACTTGTATTTGATTAGAAAATT
GACCAAAATTTCCAAACCCCCCCTTTTTTATTTGATCCCCCCCTACATTC
CCATCCCCCCTAGTTTTTTCGGCAGATCTCGGTACCCCCCCTACAAAGGC
CCTCCGAAAAGTTGGCATCCCCCCCTATTAAAAAGGGGGGGTGCAAACTA
TGGTTTTATTGTCAATGATGACAGTGCGGTTATTAATTTTGTTAGATCTG
ACAAATTGATGTTTGTAAGTGCACTTTATAGTTTTGATTCCCATTGAAGA
ATCATATTCTGGTTTTCATGTTATTAGATGCTGGTTTAGAGCTTTAGGTC
TACACTGATGGTCTTTAGATTTGAAGCAATCATTGATATTTGGCACAAGA
TTTTCCAATATTTTCCAGGTGTACCGGGTGACCCACGAAAAAGTTCGGAC
GTTTCTCGACGTCTTGAGGCTGAACAAATGTCCCAAAGTGCTTGGAGTTT
TGGTATTTAGAAAGTAGATATACTAACTTAAAATTTGAGCTATCACTTTT
TAAGTTTGACCAACTAGTTCTCTACTTATGAGCTTTTAAAATCAAAACTC
ACTTTTTGGAAAGTGTGAAAAACACGTAAAAACAGGTATTAAATTTTCGC
AATCAATTAGAAAATTACTTACAAATTGACTTAGTTAACAAGTTTTATGA
AATTAACAATTATCAAAACCACCTTTGAAAGTAATTTTTGTTTAAAACAA
GACTAGTTTTAATAAAAATTGTCACTTTCAAAGAATTTTCTCAAAAACTG
TATATCAAAAATGTCTAAACATACCTAATTTGATACCCCTTTTTTACGTG
TTTTTTACACTTTCCGAAAAGTGAATATTGAGTTTAAAAGCTCATAACTA
GGGGACTTGTGGATCAAATTAAAAAAATGATAGCTCAAATTTTAAGTTAG
GATATCTACTTTCTAAATAGTAAAACTCCAAACACTTTGGGACATTTGTT
TGGCTTCAAGACGTCGAGAAACGTCCGAACTTTTTCGTGGGTCACCCGGT
ATATGATCCTGTAGCGTTCTCTCCTTCTTTGAAGTGAGTATATTCTAAGC
TTCTTTAGACTTTCCCAATAATTGTGTGTTCCTTTTATTTGTTTCAAGAA
TGATTTCTGGATCTCTTCAAGTCTTTGAATAAGACTAATAGTACTGGGGC
TCCATAACGCTGAGCAATATTCCAGTATAGGGATCACAAGTGATTTATAG
AGAGTGATCATGGTATGTGTAGAGCGGGAAGTGAAGGTACGTAATATCCA
AGAAATGATGTTTTTGGCTTTTTCAATTATTGATTCAATTTGATGTTTAA
ATAGACAATCATTGGACATAAGAACTCCCAGGTCTTTAACATATTCCTTT
CCTTCAATTTTATCTCCTGATGGTGAGGTATAGTGAGATTCATTTTTGAT
TTCTGTATTTGAGCCATAACGTAGCAATTCAAATTTTGCATCATTCAATT
TCATATTGTTTGCGATTGTCCATTGATATAAAATCTGAAGGTCTTGTTGC
AATATTTTTATATCTTCAGCATTCTTTATTGACTTGGTTGTGCGAGTGTC
ATCTGCAAAGGACTTGACGATAGATTGGATAACATTCTCATCTATGTCTC
CAATGAGTATCAGGAAAATCAGGGGTCCAAGTACACTTCCTTGTGGTACA
CCTGAGATAACTTCTTGGTTGTTTGATTTCACACCATTAACCACTACAGT
TTGTTGCCTGTCTCTCAAAAAGGACTCTATCCAGTTATAGATTTTACCAG
TTATTCCTAGCCTTTTGAATTTCGACAGAACAATTGAATGATCCACTTTA
TCGAAAGCTTTAGAAAAGTCTAAGTAAACAACATCTACATTGGTCTCTTT
GTCAAGTAAGTTTAATATAAGATCATGTTGTTCAAGGAGCTGACTCAGAC
AAGATCTTCCACTTCTAAAGCCATGCTGATTTGGGTTGAAAAAGTTATTT
TCGTCCATGTGTTTGACATTGATGTGTTTTCTGAAGACTTTCTCAAAGAT
TTTTATAATCTGAGAGAGATCTGAAAATCTTTAGACTGAGAGGAGAGGAG
AAAAAAACAAGAAAGTAGATTGTGTGTGCTAAACAACTGTTGAAAAAGGG
AAGGCCGCTGCGTGCCTTCTTGGCTTTCTGCAGGCCTAACAAGGCTAACC
ACATGGGTTACCATGCATGGGCATGTCGGGTTAGAGGAGGGTTTATTTTA
TTTTGACTGCTAGAAAGTATATAGAATAACAGTCCAGTTAGTTCCAAGTT
CAAAATTTAATTAGCAATTGAGGGGCACAAGAAAGTTTAGGCTATACCGT
GGGTTTTGGAGAGTTTGCCTACCTCGGAAAGTATTTTACCATTTTCCTGA
CTTTCCTTACTGAAACTTGGCTGAAACTATAAAGTGTACTTTCTTTTGCA
AACATCAATTTGTCAATACACCTTTCCTGTAATTCGCCAAACTAATGCGC
ATGCATAATTTCGATGCCCTGTCACCATTTGGTCTCTGGAGGTAAAAAAA
CCCGTTTTTCCTGCATTTCCTCCAGTTTTATTTCAGAAGGGGGCATAGCC
GCCCCCGAGATGATTTTTGAAATCCTGCTCCTGAAAAGTTGACGCCAAAG
ACAGAAAAAATTTTCAGCTCCTGAGATGGTACGGTGCGCCGAAGGCTCAA
AAGCACAAAATTTTTTAGGGGTATTTTTCGCGCTTTGTTTTGGTACCGCG
ATTGAGATGTTCAATAGTGTTGAGGGCGTTATTTTTCAGGGCGAAAGGCC
GCGGTTTATTAAAAAGGACAGTCGATTGGGCATAAACTTATTAATTTCGG
CTGCCGTAATCTTGTAAAAATCATTTTCGGAACAGTTCGAAAGAAAAGAT
AGGGGACGTTGGCGGTGGTTTGTAGATGCTGCCCTTGGCCTTGGAATCTT
GCACTTACCCCTGGTACGAAGCATTTCTGCCCCTGAGGGCACTGATACAA
CTTTTTCTGCCCCTGCCCTTCTGAAAAGGAAAGGTCCTGCCCCCGAGATC
TCGACGAAATCTGCCACAATCTGAAAACTGGCATTTCCTTAGGGAAAGTT
GGTTTTTTGAGCTTTTCTCAAGTTCTGTAGATCAAAATCCCCTCAAATCT
TAGTATGTTCAATCTATTCCTGCTATTATACCACCCTGAAATATTTTTGC
CAAAAGAAGATCGCTATCAAAAGTTAGAAGTTGAAAACCTACTTTCCCTA
ACCCCTTGCAGGCAAAAACGCGTCAGTTTACCTCCCAAACAATTTCGTAC
ACACCGGTGGAGCGCACATTTTCCCGGGCCATTTCTGAGAAGTTTGAATT
ACGGGAAAGGTTTATTGTTGGAATTTTTTCAATAATGCATGAAATGTTAA
ATCAGTAGAAAAATAAAAAAATGTTATACATATTATTTTATAACATTTCA
TGTTATTGAGCAATGAAAAATTGAAAAAGTAGCTTTAAAAAATAAGATTC
AATTTTACAATTTACAAACCCCTCTGATATATTTGCCCTTATAAGGACAA
CACATTTTGCTGATTCAGCATTTTATATGATTGCTGTTTTTATCTTAAAA
ACACCCAACTGTTTGTCTGATCTAAGGGGTCGTCGACAATCCTTTTTTTT
AAGGTTTAAGGGGGAGGGGTCGATGTTTATGCAATCAAAAATAGTTTTAA
AAAAAGGAAAATCTCACTTACAATAGAAGCTCCTCGCAGTGTCCCAAAGT
CTTAAAAGGTACTAATAAACCATTTGATCCATCACTTTGACCATACTTTT
CAATTGTATATCGAGAAATACAATTCGTCACATGACCCAATTCGCTCCTG
CACGGTTGAAAAACTTAAATCTTTCAATCATTTTCGCAAGCAAAGAGTAT
GCGTAGTGATTCTAGCTTTACGTAGTGCCGTGGATCATTCATTAGTGGAT
AGTATTCAACTATCATTATCCCTTTTTTTCAGAAAATTTGTGTTTTTCAT
TGCTCTATTACACGTTTTTTATATAAGAATGTCCATGATGAAAATGGTCA
AAAAATTTAGAATAATACTAAGAATTTCATCATCATGGAATTTTGCTACT
CAGCAAAGAATACCATTCTTAGAGCATTTTCATTGTAAATTGTCAATTAC
CCTGAAGTAAGGTTCACTCCTTTCACAAAAATGTCATTAATTATGCTTGA
AACGTATGTACTAACTGGTTAAATCTAGTCTAAATTAGGATCCTAACTTA
AGAATTCTGTAAGAATATTTTAGGATGATTCTCCCAAAAAAGTTAAGAAT
ATCCATGATGAAATGGATTTACACCATTCTTATAAAAAAGCGTGTAACAT
ACTGAATTTGAAAAATTTTCTATGTGCCTTTTTTTGCAACTTTAAAAAAC
TGATTTTTGTCCCGTCATTATGCAGGACTTCAGCTTAAGTGCTTGCAGGG
TTCAGACAGACCCTGGAAAACCTGGAAAACCTGGAAATATGATAAATTTT
CAGACAAATCAGGGAAACTCAGGGAAACCCAGGGAAAAAAATTTTTTTCC
CCGTATGCTCAGGGAAACTCAGGGAATTTTATTTTTTGAAGAATGAATGG
AAAAAACAGATTTAAAAGTTTTTTAGTTTTAAAGTGTTTATTCATATGCA
GTATTTGTAGCTTTAATTTTTACCTTAGGTTTACCATTTGATTTGTGTGC
CTTTTGTTTAGAGATACATCTCTTTTGACTCTGCTTAGTTTTTATGGTTT
GCTTGATACTCAGGGAAAAAATAGCTAAAATGAGGAATTTCTCAGGGAAA
AAACCTTTGAAAATTGATTAAAATTCAGGGAAACTCAGGGAATTTTATTT
TCGAAGGTCTGTCTGAACCCTGGCTTGCTTACAGCATTAGGTACAAAGTC
CAAATATGTGTTTCTTGTGAATTTTATATAAATTATATAAAGAGCTATAC
TGTATGTCGGCATTGCACAAAAGTTATTTTACCAGAAATTACTAGATGTG
GAAGAATAAAAGGGTGCGTTGAAATTTGAATTTGAGAAAATAACATATGC
ACCAAAATTAATGAGATTAAGGTATATAATTCGATATTTATTGCTTGAAG
AATATTGGAGATTGTTGCTTGATTTTGTGTGAGATTTTAATCATTTTTTA
ACTTTATGATAAGGAATGATCTTCCTGGAAGGGACAGAATTCTGGAAAAA
TTTACGCTCATTCTTCCAATTTTGGAAGAATGTTACTTGTGGAGCTAGTG
GCAAGGACTGGTCAAGTATAAACAATTTACTCCTTATTTTTTGATGGACA
TGAGAAGTTTCTGTGGACTTTTGACTGATCAAAAGATGATTTCTAAGATA
TGCTTCTCAATGTCGCTGTATCATGCAATTTATGGAATTTGTCCATGAAA
GTTTAATTGAACCTGTATTCTAGGTCTTTACATCTCTGATAATGGTTCTC
AAATTAAGTGGTTACTCTTAGGTTCCAGATAATCAGGGGGACAGGTCAAG
TTGAACATTTACAAGAATTTTTGTCATGGGATTGGTCGTTAACTATTCAA
ACAAAAATTTTTCTAAAGAACGCGTCATCTCATTGTTTTGAATAACCAAT
TATGTGAGCATCTTGTAAAAACTTCAATACAACTGGGGGGGGGGGGGGTG
GGTTGATCTTTCAAGATTTTAGTAAACAAGGGGGCATAATTGCCTTGGGT
TGGAAATTGTACTTTTGAAAACCCAAAATAAGGTAGATATAGGCTAAAAT
CAGGTTATTTAGAGCAAAATAAGGGGCCTTCTCTTTGACAGCTGAAAATA
TTCTTAAAAATTAATAAACGGCGGGTCCTAATGAGGTCCGACAGGGTTGG
AAAATTTTCGAAAAATTAACACGCAGGGTGGGGCGTTTATTTGGAACCTA
AGAGTAAGTTATCAAATATCATAATTTTTTTATCTGATTTCAAGCATTTT
GATATTTACTATTTCAGCGCAGCTAAAAATAAAATAGTCAAAATGAGTGG
ACGCGGTAAAGGAGGAAAAAGTAAAACTAAAGCAAAATCGCGATCATCAA
GAGCTGGCCTACAATTTCCTGTTGGAAGAATTCACAGATTTTTACGTAAA
GGACATTACGCCTCTCGAGTTGGAAGCGGAGCACCTGTTTATCTGGCTGC
AGTTTTAGAATATTTGTCTGCTGAAATTCTTGAATTGGCTGGAAATGCAG
CCCGTGATAACAAAAAACGTCGTATTGTTCCACGTCACTTGCAACTTGCC
GTCAGAAATGACGAAGAATTGAATAAACTTTTAAGTGGAGTCACCATTGC
TGCTGGTGGTGTTTTGCCAAACATCAACGCTCTCTTGCTTCCCAAGAAGA
CCAAAGAAGCTAAGGGCAAAAATTCTCAATCTCAAGAATATTAA Coding sequence (CDS) from alignment at sc0000338_pilon:203895..212288- >XLOC_036708 ID=XLOC_036708|Name=XLOC_036708|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1104bp|location=Sequence derived from alignment at sc0000338_pilon:203895..212288- (Clytia hemisphaerica_ch_hm2_pilon)
CAAAAGCACTGCACAGAAAGGAATGATATTTCTGATCCTTCATCACTCAT
GAAATTGGCAAATCAGTCTATTACAGCTAGAGCATGCATGTCTGTATACT
ACGAAATGTTTATTATGATTTGCAGCAAAAGCACTGCACAGAAAGGAATG
ATATTTCTGATCCTTCATCACTCATGAAATTGGCAAATCAGTCTATTACA
GCTAGAGCATGCATGTCTGTATACTACGAAATGTTTATTATGATTTGCAG
CGCAGCTAAAAATAAAATAGTCAAAATGAGTGGACGCGGTAAAGGAGGAA
AAAGTAAAACTAAAGCAAAATCGCGATCATCAAGAGCTGGCCTACAATTT
CCTGTTGGAAGAATTCACAGATTTTTACGTAAAGGACATTACGCCTCTCG
AGTTGGAAGCGGAGCACCTGTTTATCTGGCTGCAGTTTTAGAATATTTGT
CTGCTGAAATTCTTGAATTGGCTGGAAATGCAGCCCGTGATAACAAAAAA
CGTCGTATTGTTCCACGTCACTTGCAACTTGCCGTCAGAAATGACGAAGA
ATTGAATAAACTTTTAAGTGGAGTCACCATTGCTGCTGGTGGTGTTTTGC
CAAACATCAACGCTCTCTTGCTTCCCAAGAAGACCAAAGAAGCTAAGGGC
AAAAATTCTCAATCTCAAGAATATTAACGCAGCTAAAAATAAAATAGTCA
AAATGAGTGGACGCGGTAAAGGAGGAAAAAGTAAAACTAAAGCAAAATCG
CGATCATCAAGAGCTGGCCTACAATTTCCTGTTGGAAGAATTCACAGATT
TTTACGTAAAGGACATTACGCCTCTCGAGTTGGAAGCGGAGCACCTGTTT
ATCTGGCTGCAGTTTTAGAATATTTGTCTGCTGAAATTCTTGAATTGGCT
GGAAATGCAGCCCGTGATAACAAAAAACGTCGTATTGTTCCACGTCACTT
GCAACTTGCCGTCAGAAATGACGAAGAATTGAATAAACTTTTAAGTGGAG
TCACCATTGCTGCTGGTGGTGTTTTGCCAAACATCAACGCTCTCTTGCTT
CCCAAGAAGACCAAAGAAGCTAAGGGCAAAAATTCTCAATCTCAAGAATA
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000338_pilon | genome | sc0000338_pilon:203895..212288 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 127-552:427 |
| Aaloc | 1-123:8395 |
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