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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000126_pilon:310304..313026+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036698 ID=XLOC_036698|Name=XLOC_036698|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2723bp|location=Sequence derived from alignment at sc0000126_pilon:310304..313026+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAGGCTAATAGCAAGTAAGTCGCTGCTGAGACCAAGATTATCACA
CATTTCAAGCAGATGTCAATCAGATAGCTCTTCAAGTGAACCACCTGTTG
TAGAAAAGACTTTTCGAGAAAAAGCACGAGATACATGGAATGGACCAACG
TTAAAATATTGGCTGATTGGTGGCGGTGGTTTTATCAGTTGGCTCGCCTA
CTATAGCTATCAGGCATATAAGAACAAATGCATTGATATAGAGTTGCCAC
CGGCATTGCCTAACCACCTGTTAATTGACAGGAAAAAAGAATTTGAGATT
TTGACAGACAAATATAATGCACAAGACACGAtgttttcaacacaaaaagt
caagaaattgTTGATTCATGGTCCATCTTGCAGTGGGAAAACAGTTTTTG
CAAACCAATTTATTAAGCATttgaaactaaaacaaaaatcaaCGCTTCAA
CTACCTGTTTCCAATGTGACATTGTTCCTACAAACTGATACTGAAACCTC
CTTTCTCATTTCCTTAAAATCTGCAGCTGCAAAACTTGAAGTATCAAAAA
CTGATTTAGATGAGGGTATGCAAAGTGGATCCTTTAGTGATGGAACATTT
AATGAGCAGTGTAatgttttaattgaaaacatCCAAGATAAGTTGTCCAA
ACACCCTGGATGGGTAATCATCTTTGATCAATTACAATCAACCAGTCCAA
CCACTGTTCTTGAAATATTGAATAGCTGTATCGAAGAAGAAGAGAGCTGG
AGCTCGGGTTTGTTCGTGGTTGTTGCTGACGGTGTAGATCCAAAGACAGT
TGCCATCAATAAGCAATCAGCCATTTCTCTGCAGAAAGGGTGAGGGTTGc
ttttgaaaatcaacttttgattaaaatgaacggataaactttttgataat
ttttaattttcaaccaTACACTTGAATATATAATATAGATCTTTGAACTG
GAAAGCAGCTATCGTTTAtaaaatgttatgttatactttCAATTTTGTAA
CTTTTACATCGTATTAATTTGAATAAATGCCTAAAAAAGGGTCTGTTTTA
TTCATAGTAATACGATATGTATATGCAATCTTTGTTGAATGATTTTATTA
TCAGACCtaattgttgttgttttctttaCAGGATGTCTGTAGAAGATGGT
GTTCAACTCTTGAAAAACTTTGTGAATGTTGACGGGAATGTGGCATCATT
GAGTTTACTGGTGGAGAAGGTGTTTGGCAATCCGTTGGCTTTACTTTGTA
ATGCAGTGCTGCTGAAAAAGAAACTAGCAATGAAGCAGGTTCAAAGTATT
GATGACGCAGTGAAAGAAATTTGTgatgaaattgatgaaaatgtCAATCG
AGTAATCTCGCAGAACCAACACCTCTCTGCTTTCACTTCCACTTATTCAG
GACGGAAACTTGTCACCATTGAATCTGTTGTTGCCATTCTAATGAAGGAT
ATCATAAAGGAAAGTCCTTATTTATACAATGGCATTGACCTGATGGCAGC
AATGGCACCAGGGACTGCCATACCACAACAAGCCATTACTCGACATCTTG
CATCTTCATTCTACAAACTGCCATCACTGGCAAAACCACCAAACATTTTG
GATTTCATGAACAAACAGCAAAGAGATGCGGACGACGTCAAGCAAAATGC
TGATGAATTTGATCCCAAAGGAAAAGTATGGTCCAATAAAAACCTGGTGC
ACTACATACAGAAAGTGGAAGAGTTCTTTGAGACGGTGTATAAGACGTTG
AAGGAAATTTATTTCTTGGTGTATGGTGTGTTACCAGAGCTTCCAAAAGG
TGATGATGGAATGGGAATGTTCTCAGAATGTGTTCTCATTCAATCAAGTG
TCGTCCAACCAGGAGGTATGATCCTTGTTCTCTTTATAAAATTCGCTATT
CGTTAATTCTGATATAACTGTCCtctttccaaaattttcatattgtctat
taaaaaaaattacagacGTAGATGAGGTGATTGAATTGTTATTTCAGTAT
TTACAATATTATGCTGTgttcagaaaaatttactttacTCTATAACAGCC
TGATCGAaatcaattttcagattttgattcgacttgaattcaaaatttgt
tcAGGTTTGTTATTGATCCGTCAAAGacaagaagaaaataattttacctg
acttttttaatcttttcaaAACCTTTCTGTTTCACAGATGTAAACACATT
CAGTCTGCACCCAATAGTGTACAACGTAGCGCGCCAACATTTCATGGCAA
AAACCCTGGTCGACATTGAAGAAAAGAATGTGCGCGAAAACAAAGATTTC
CATCAAAACAAATCATGGTACCGAAAATTAAGCGATTTCAACGAGCAAAC
GATACTCCAACAATATCGTAATTCGGCTGGTCATGGTGAGATCAAAAAGA
TGTTATCAGATGAGGATGCCAACAGTTTATTGTTCCGATTCAATCTTGGT
ATCGACGTCTCTTGTCTGTTCAAAGAGGATGAAAACACCAGCCAAGATGC
TTGCTGGGATGGAAAACCAGTGGAAAAAGTTGCTCTACTCCAAGATCATT
TGACCAGGATCACAGATTCTCTTTGCGAACAGATGAATGTGACCAAGGGT
GATCTCAATGGTCATACTGTCAAGAAAATATTGATGCTTCATTTAGAATA
CATTctaaaaaatcaaccttttgAGTTATTGGGAGCCAGAAATCAAAGCA
AGATTTTATTTGCATTAGCTAAA Coding sequence (CDS) from alignment at sc0000126_pilon:310304..313026+ >XLOC_036698 ID=XLOC_036698|Name=XLOC_036698|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4218bp|location=Sequence derived from alignment at sc0000126_pilon:310304..313026+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAGGCTAATAGCAAGTAAGTCGCTGCTGAGACCAAGATTATCACA
CATTTCAAGCAGATGTCAATCAGATAGCTCTTCAAGTGAACCACCTGTTG
TAGAAAAGACTTTTCGAGAAAAAGCACGAGATACATGGAATGGACCAACG
TTAAAATATTGGCTGATTGGTGGCGGTGGTTTTATCAGTTGGCTCGCCTA
CTATAGCTATCAGGCATATAAGAACAAATGCATTGATATAGAGTTGCCAC
CGGCATTGCCTAACCACCTGTTAATTGACAGGAAAAAAGAATTTGAGATT
TTGACAGACAAATATAATGCACAAGACACGAtgttttcaacacaaaaagt
caagaaattgTTGATTCATGGTCCATCTTGCAGTGGGAAAACAGTTTTTG
CAAACCAATTTATTAAGCATttgaaactaaaacaaaaatcaaCGCTTCAA
CTACCTGTTTCCAATGTGACATTGTTCCTACAAACTGATACTGAAACCTC
CTTTCTCATTTCCTTAAAATCTGCAGCTGCAAAACTTGAAGTATCAAAAA
CTGATTTAGATGAGGGTATGCAAAGTGGATCCTTTAGTGATGGAACATTT
AATGAGCAGTGTAatgttttaattgaaaacatCCAAGATAAGTTGTCCAA
ACACCCTGGATGGGTAATCATCTTTGATCAATTACAATCAACCAGTCCAA
CCACTGTTCTTGAAATATTGAATAGCTGTATCGAAGAAGAAGAGAGCTGG
AGCTCGGGTTTGTTCGTGGTTGTTGCTGACGGTGTAGATCCAAAGACAGT
TGCCATCAATAAGCAATCAGCCATTTCTCTGCAGAAAGGATGTTCAGGCT
AATAGCAAGTAAGTCGCTGCTGAGACCAAGATTATCACACATTTCAAGCA
GATGTCAATCAGATAGCTCTTCAAGTGAACCACCTGTTGTAGAAAAGACT
TTTCGAGAAAAAGCACGAGATACATGGAATGGACCAACGTTAAAATATTG
GCTGATTGGTGGCGGTGGTTTTATCAGTTGGCTCGCCTACTATAGCTATC
AGGCATATAAGAACAAATGCATTGATATAGAGTTGCCACCGGCATTGCCT
AACCACCTGTTAATTGACAGGAAAAAAGAATTTGAGATTTTGACAGACAA
ATATAATGCACAAGACACGAtgttttcaacacaaaaagtcaagaaattgT
TGATTCATGGTCCATCTTGCAGTGGGAAAACAGTTTTTGCAAACCAATTT
ATTAAGCATttgaaactaaaacaaaaatcaaCGCTTCAACTACCTGTTTC
CAATGTGACATTGTTCCTACAAACTGATACTGAAACCTCCTTTCTCATTT
CCTTAAAATCTGCAGCTGCAAAACTTGAAGTATCAAAAACTGATTTAGAT
GAGGGTATGCAAAGTGGATCCTTTAGTGATGGAACATTTAATGAGCAGTG
TAatgttttaattgaaaacatCCAAGATAAGTTGTCCAAACACCCTGGAT
GGGTAATCATCTTTGATCAATTACAATCAACCAGTCCAACCACTGTTCTT
GAAATATTGAATAGCTGTATCGAAGAAGAAGAGAGCTGGAGCTCGGGTTT
GTTCGTGGTTGTTGCTGACGGTGTAGATCCAAAGACAGTTGCCATCAATA
AGCAATCAGCCATTTCTCTGCAGAAAGGGATGTCTGTAGAAGATGGTGTT
CAACTCTTGAAAAACTTTGTGAATGTTGACGGGAATGTGGCATCATTGAG
TTTACTGGTGGAGAAGGTGTTTGGCAATCCGTTGGCTTTACTTTGTAATG
CAGTGCTGCTGAAAAAGAAACTAGCAATGAAGCAGGTTCAAAGTATTGAT
GACGCAGTGAAAGAAATTTGTgatgaaattgatgaaaatgtCAATCGAGT
AATCTCGCAGAACCAACACCTCTCTGCTTTCACTTCCACTTATTCAGGAC
GGAAACTTGTCACCATTGAATCTGTTGTTGCCATTCTAATGAAGGATATC
ATAAAGGAAAGTCCTTATTTATACAATGGCATTGACCTGATGGCAGCAAT
GGCACCAGGGACTGCCATACCACAACAAGCCATTACTCGACATCTTGCAT
CTTCATTCTACAAACTGCCATCACTGGCAAAACCACCAAACATTTTGGAT
TTCATGAACAAACAGCAAAGAGATGCGGACGACGTCAAGCAAAATGCTGA
TGAATTTGATCCCAAAGGAAAAGTATGGTCCAATAAAAACCTGGTGCACT
ACATACAGAAAGTGGAAGAGTTCTTTGAGACGGTGTATAAGACGTTGAAG
GAAATTTATTTCTTGGTGTATGGTGTGTTACCAGAGCTTCCAAAAGGTGA
TGATGGAATGGGAATGTTCTCAGAATGTGTTCTCATTCAATCAAGTGTCG
TCCAACCAGGAGGATGTCTGTAGAAGATGGTGTTCAACTCTTGAAAAACT
TTGTGAATGTTGACGGGAATGTGGCATCATTGAGTTTACTGGTGGAGAAG
GTGTTTGGCAATCCGTTGGCTTTACTTTGTAATGCAGTGCTGCTGAAAAA
GAAACTAGCAATGAAGCAGGTTCAAAGTATTGATGACGCAGTGAAAGAAA
TTTGTgatgaaattgatgaaaatgtCAATCGAGTAATCTCGCAGAACCAA
CACCTCTCTGCTTTCACTTCCACTTATTCAGGACGGAAACTTGTCACCAT
TGAATCTGTTGTTGCCATTCTAATGAAGGATATCATAAAGGAAAGTCCTT
ATTTATACAATGGCATTGACCTGATGGCAGCAATGGCACCAGGGACTGCC
ATACCACAACAAGCCATTACTCGACATCTTGCATCTTCATTCTACAAACT
GCCATCACTGGCAAAACCACCAAACATTTTGGATTTCATGAACAAACAGC
AAAGAGATGCGGACGACGTCAAGCAAAATGCTGATGAATTTGATCCCAAA
GGAAAAGTATGGTCCAATAAAAACCTGGTGCACTACATACAGAAAGTGGA
AGAGTTCTTTGAGACGGTGTATAAGACGTTGAAGGAAATTTATTTCTTGG
TGTATGGTGTGTTACCAGAGCTTCCAAAAGGTGATGATGGAATGGGAATG
TTCTCAGAATGTGTTCTCATTCAATCAAGTGTCGTCCAACCAGGAGATGT
AAACACATTCAGTCTGCACCCAATAGTGTACAACGTAGCGCGCCAACATT
TCATGGCAAAAACCCTGGTCGACATTGAAGAAAAGAATGTGCGCGAAAAC
AAAGATTTCCATCAAAACAAATCATGGTACCGAAAATTAAGCGATTTCAA
CGAGCAAACGATACTCCAACAATATCGTAATTCGGCTGGTCATGGTGAGA
TCAAAAAGATGTTATCAGATGAGGATGCCAACAGTTTATTGTTCCGATTC
AATCTTGGTATCGACGTCTCTTGTCTGTTCAAAGAGGATGAAAACACCAG
CCAAGATGCTTGCTGGGATGGAAAACCAGTGGAAAAAGTTGCTCTACTCC
AAGATCATTTGACCAGGATCACAGATTCTCTTTGCGAACAGATGAATGTG
ACCAAGGGTGATCTCAATGGTCATACTGTCAAGAAAATATTGATGCTTCA
TTTAGAATACATTctaaaaaatcaaccttttgAGTTATTGGGAGCCAGAA
ATCAAAGCAAGATTTTATTTGCATTAGCTAAAATGTAAACACATTCAGTC
TGCACCCAATAGTGTACAACGTAGCGCGCCAACATTTCATGGCAAAAACC
CTGGTCGACATTGAAGAAAAGAATGTGCGCGAAAACAAAGATTTCCATCA
AAACAAATCATGGTACCGAAAATTAAGCGATTTCAACGAGCAAACGATAC
TCCAACAATATCGTAATTCGGCTGGTCATGGTGAGATCAAAAAGATGTTA
TCAGATGAGGATGCCAACAGTTTATTGTTCCGATTCAATCTTGGTATCGA
CGTCTCTTGTCTGTTCAAAGAGGATGAAAACACCAGCCAAGATGCTTGCT
GGGATGGAAAACCAGTGGAAAAAGTTGCTCTACTCCAAGATCATTTGACC
AGGATCACAGATTCTCTTTGCGAACAGATGAATGTGACCAAGGGTGATCT
CAATGGTCATACTGTCAAGAAAATATTGATGCTTCATTTAGAATACATTc
taaaaaatcaaccttttgAGTTATTGGGAGCCAGAAATCAAAGCAAGATT
TTATTTGCATTAGCTAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000126_pilon | genome | sc0000126_pilon:310304..313026 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1576-2109:2190 |
| Aaloc | 841-1572:1133 |
| Aaloc | 1-837:1 |
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