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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000338_pilon:268513..274383+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036691 ID=XLOC_036691|Name=XLOC_036691|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5871bp|location=Sequence derived from alignment at sc0000338_pilon:268513..274383+ (Clytia hemisphaerica_ch_hm2_pilon)
tcaaataagTATGAAAGTATGATtacaaatttttgttgtttatgcATTTA
TAAAGGAgcttataatttatttttcagattcaaaaaaagttttaaaagac
aAATTGTGATATTACTTAATAATATGACCATGGCAACAATTACAGGTAAG
TGTAGCCAACACTCTCTAAATCCGTCCAATCTGTTTACTTCTCACACCTC
TTGATGTaccgtcgttttttataagtttcccatttccgcactaagattcc
tttgcaaCTTTTCTATCGGAGAAAGACCAGGACTTTGGGTAGTTAAAAaa
tgagcttcggaaagttaggcagtttcgtgagtaaacacaagattttccct
ACCATTAGAAACAAACACTTTCCAATCGCTTGCAGGTTATTtcgggaaaa
atagcggaaagatttCGGAAAAGGTCTCACGTTTAATTGATAACATGAGA
CAATATTAcccttttttaaagaacattccaaatttttgaagcctttcgac
tttttcagtgtttttatcaattttcctaagaaatcgggtacatgattttt
ttataagaacaaactatataagaacataaggctttcgatgacaaaaatat
tgagaatatttaaaggcttcgtggactctaaaacacccaatttcttagga
aaatggacaaaaatactcacaaaatggcgaaaataagaacatgctaaaaa
catttttaggcctaaaactcaaaaagagaattcaaggcttcaaaaatttt
ggatgttcttatagagAAACGTGTAATGCAAACCCTTACAATGTTGTTGA
CTTGTTCTCaatggccatcgaagccttattataatttatttctttatttt
ctgtATTTCATAGCAAATTTACCTGATAACCAAAACAATGATACATTGAT
TGCTTATCAATTCTTGGattacaataaaaatgaaaccaTCAAAGAAAATA
TCCTTATGGTAGAtgagatatttcaaaatataaaagacATTCGGTCGTTA
CACAGTCAGAAAAAGACGTTGAATCAAACAAAGCGATTTCTTTTGCATAG
ATCGCTTCAAAAACGACACGCGAACCGTGGAACCAGGTACAataatttcg
atctttcagggggtaaaaagttgaaatttttctaaatttgattttctgat
ttttccgacccttagcgggactttggaagtccaaaaaaggtaccctttta
agggcggcacataccgtaccctccatttgcctaagtaccccccccccccc
gcgcgGCAAGTtatacacactcgttatttatTAATTTAATAATTTGGCCT
GTGGATTTCTTCTGTTCTATTATCCTGAGCCAAACTTATGACTATTTTTT
GCCatactattttccaaagtccaCGTTTCATTCGTCACATTATCCTAAAA
AGAGTAGATACAAAAcgacaaaaagtttcaaaaatgttttctaaaTGTTG
AATCTCCCAATTCTCTTTATAGGGAGGATGCAGATGACATTTGTAAAACA
GTGACTGATAATAGACGCGAATGGCAGGACCGTAGAGATTTGTTGAAAAT
GGCTGTCCCCTTGATCGGTGACTATATCAAAGCACAGGAAGAATATCTCC
ACAATGCCGTTAAAAATATCACAGATTACGTGGGTAAGTAATTGAGTATA
ATGGACTATAGTTTTCTACCGAATAATAGGctaattccagaaaaaattag
AACTCCCTATGTCGAGGAGGTCTTCTTCaggtcttcaaaatttttaggac
gctcttggattttttaaatttttttggaccTCTCTGTATTTTCAGCCTTG
TTTTACTGACCCCTGGGTTTTTTaatttccagaccaccctgaaCGTAATT
ATATCTCCTTGACATACGGGatatagactggcacgccagtcgggctggaa
cggtatcacgcgggaaaagtgagcgtaggagttaggtaagcgtaggaaga
aattttgtcggcggcaagggctgaaagcccgactggagcgaaaccccagg
aaggaaaaaacggctaagctgaagccccaatcttacaacgccagatttcg
gcgttgtagaaatgaatgaactttgagaaattcgtgaaatgagaaatgaa
aacttccgtcaaagtcgcagatcgtgttgttttgatttttgaggagtgAG
TGATTGGAAGAAAAATGGCTGACTTctagtggaaatttttatttgaatag
atgttttgtttcttgtttcttatttGATGAGTCTCTTCTTTGTGTATATA
TATGTGGCTTTTCTTCATGGTTCTCTGCATATGCAAAATTCGTTGAATCA
TTTTTGGttgtcttttgttttgatttgagaggcaagagaagatggaaaat
cttgtaacatcagttatcagaacttgttgatttgttatcttttcctattc
ataactcattcaattttaggaatggAGTATTCAGATCGCAAACACTATGg
actgtgagtttttttttcatttcagctttctttttcctAGATTTACATGT
GGTAATCAAAGGGATAACCCAGGTACAGTACCCTTCGTACCCTAACAATT
ATTTACTGACATTCAAACATaagactttttaattttccaggactcacaag
tcaaaggttctttatcaaaaatatatggaTGTTGCACTACCAGAGACTAC
TACACGACACTGACACAATGTCGTACGTATTGGAAGTGCAACAAAACGTG
CaacaaacttttgtgaatatctaccTGGTTATCCCTTTGTTATCCCTATG
ATAAAATTATAGTTTTGAGCAGAAATAAAGTTATGGTAAAGCAGCACTGA
CAAACaacaaatttctccaaaaaacattttctttcaaataatgaaatatt
aaaagtcttcttacaagatttgaaaatgattaaattttttcaccatgctt
atgttttactcaattctagtaatttttccaaaacttataACTTGCATAGA
GGGAAATTTAGCAGAatttatggagaaaattaagaattctcagtttggca
acaaacattttcaaatgtaCTGTACTATCACTTAAAACATTATTAAATTG
CCagattagtgtggcaagaaaactctaaaaaaatttagccataaatcttc
aaGtgtgaagttaattttatttccatagctcacttgttcaacaaattctt
gtcaaattggatgtcgaacaagtgggttgttGAACAAATGAGTACCAAAA
TGATCGACAACCCAGTTGATTGACAATCCACTTGTTCGACCAACTATATA
GTTGTTCGACCAACTATATAGTTGTTCGATAACCTATATAGTTGTTCGAC
AACCTATATAGTTGTTCGACAGACCAGTTGTTTGAGAAAAGAGTGTCAAA
CAAGTGGTTGTCGAGCAAATGGATGTCGAAATAAtaactgtcgaacaagt
gggacttccccaaaattatagttgtacgtagatgaaaatttgtcaaaatt
tataTTACGGTGAAAATTCTCAGTTTGATAACAAAAGTTTCTCGAATAGG
TAACTTTAATTTACATAATTATAATATTAAATTGTAACATTAGTGGGACA
agaaaactctttaaaaaaaatagccATAAATCTTGGTAGTGTAAAGAAAA
GTgacaagaaaattcttcagcaCATAGCCACAATCTATAGAAAAATGTCA
GAATTTACATAATTCTTTTCTCACGaaaaaaaTACTACATTTTTCTAAAG
TTatgaatatatatatatataaattatGGATTTTCCATCAGAGCTATCTT
ATCACAGCactaaattctgcaaatttcaatttttaacaaattaaatttgt
gcaTGTCGATGTTACATTTTTCCTGACAGACTGAAAAACTTAATTATTTC
AACATGACATCTAaaactagcaaaaggtctatctaTTTAATTTTCTATGC
GTATATACGTGTAATTTTCCAGTGCTTGGCTGGTACGTTACATGCTGACA
GTCAGGACAGGTTGTTTTTTGTAGCAGTGAGTCTGTTGAAGAGGGTTGGG
CTGTCAGACAGCAGCCAGCCTGGGAGTGATGACATTGAGAGTTTCTTTAA
ACTAACCAGGAAACGCTGTTTATTCTCACGATAAcctaaaaatggttttc
aaacCGTACCAAAAACTTTTGTCAACTCAATATTATGTTGACTAAAATTT
TTGGTACGGCTTGAAAACCTGATTTAGGTTATCGTGAGATattaaaagtg
tcagaattattgattattatgatatgttattttattctaaaaatagtgtc
aaaatttttccaaaatggtTATATTGCTGGGTACTTTTGAGAAGAGTTCC
TGCCTGGTTAGTGTTACTGTTGTATTCATTGTGTTGGAGAGGTTCACTTA
GCCACAATGAGACTAGACTGCTAGAGTAATCAAGTTCCTTAACAAGTAGT
CTGtaagtactaaaataaaaaagcaaaaagtatttaggtggaaccaaaat
agaaaaaatatttcttaccttgAATGAAAGAGGCTAGCAAAAAGCCACCA
ACCTGGATAGGGAAAACTGAATAATCCTTGTACACTTTTGATGATtgtag
aaaactgaagctaaattGCAAATACTTACCTTTCTAAGAATGTATGAAAA
AACAACTaagatgtaaaagtttcaaaacttgaaaagtggCTCATCCTTTT
Accacccaaaattcaaaacaaagtggtctgtcggcttttctccctccaaa
atttaggaaagcacTCCCCCGTTCTCAAAACCTCCAAAATGAAGCCGTGG
CAGAATGTTCTAGTCTGtaaatcagcagcctctcaccaacttttgctcgc
tctcctacgcagctcctattctagcaaacgcccgccgcctttatgttccc
gccctctgacatgattaatttacagactagtttgctagtctatacGGGAT
ATAGAATTTTTCTGGAATAACCCAATATTTTTGATTGAATCTTAAATGTT
CCTTGGAATGTTCTCAAAACCCTTTTAGTTTCATATAGATAGAATTCATA
GATTTTGATTCCTTCACATTTATTTTTACCAGGGGTCGATAAATTTTCAA
CCTTAAAAATTCTTTGAGTTCGTGATGGACGCAGCCTTTCTATAATTAAT
CCACGCAAAAattaatacactcttctcgagatgcatcgatttattgttgt
cctcgttttcaaacagatttcactgctataaaattacatattcacgatga
taattgtgttgtttacacctcatgagacattttgaattttaagtactttt
gttttagagttaatgtttgccttttgggaatttaagttggtttaaatgta
taatttgatagcaatgaaatctgtttgaaaacgaggacaacaataaattt
atgcatctcgagaagagtgtattcactTAAAGGTATTTACGATACCTTTG
CAGGCAATTTCCTACTAGAGTCTTAGGTGAGACGaatgtattttttaaat
aaagctCTAAGTTGAAAGCTATCATTCAAAACATTGTCTATTGATTGTTT
CAGGTGATATCACAAAGGAATTATTATCGACCAAGATGGAATACAGTCTA
AATCTAGCCTGTAAACAAGTTCAATATCAGCCTCCAGTTACGTGTCTCAC
GTCAAAGAAGAAACATgaaaaattacgcatgcgtaatgAGCAAGCAgaaa
gaattcttcaaaaatGCGAGCAATTGAAAGAGGCATTAACAGCCTTAGAA
CCGGTTTCTAGAAAAACGAAATTCAAGAAACGTTTCGAGAGCAGACGTGA
tgctatgaaatattttttgagcacTCGAAAGTCGGATTCTGAGCTAGATT
TTGATATAAGCACAAGAGGTGAATTTATTGTCGAAGAATTACGTAATGAT
TTGAATAGTCAATATTGGTAA Coding sequence (CDS) from alignment at sc0000338_pilon:268513..274383+ >XLOC_036691 ID=XLOC_036691|Name=XLOC_036691|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1794bp|location=Sequence derived from alignment at sc0000338_pilon:268513..274383+ (Clytia hemisphaerica_ch_hm2_pilon)
tcaaataagTATGAAAGTATGATtacaaatttttgttgtttatgcATTTA
TAAAGGAgcttataatttatttttcagattcaaaaaaagttttaaaagac
aAATTGTGATATTACTTAATAATATGACCATGGCAACAATTACAGtcaaa
taagTATGAAAGTATGATtacaaatttttgttgtttatgcATTTATAAAG
GAgcttataatttatttttcagattcaaaaaaagttttaaaagacaAATT
GTGATATTACTTAATAATATGACCATGGCAACAATTACAGCAAATTTACC
TGATAACCAAAACAATGATACATTGATTGCTTATCAATTCTTGGattaca
ataaaaatgaaaccaTCAAAGAAAATATCCTTATGGTAGAtgagatattt
caaaatataaaagacATTCGGTCGTTACACAGTCAGAAAAAGACGTTGAA
TCAAACAAAGCGATTTCTTTTGCATAGATCGCTTCAAAAACGACACGCGA
ACCGTGGAACCAGCAAATTTACCTGATAACCAAAACAATGATACATTGAT
TGCTTATCAATTCTTGGattacaataaaaatgaaaccaTCAAAGAAAATA
TCCTTATGGTAGAtgagatatttcaaaatataaaagacATTCGGTCGTTA
CACAGTCAGAAAAAGACGTTGAATCAAACAAAGCGATTTCTTTTGCATAG
ATCGCTTCAAAAACGACACGCGAACCGTGGAACCAGGGAGGATGCAGATG
ACATTTGTAAAACAGTGACTGATAATAGACGCGAATGGCAGGACCGTAGA
GATTTGTTGAAAATGGCTGTCCCCTTGATCGGTGACTATATCAAAGCACA
GGAAGAATATCTCCACAATGCCGTTAAAAATATCACAGATTACGTGGGGA
GGATGCAGATGACATTTGTAAAACAGTGACTGATAATAGACGCGAATGGC
AGGACCGTAGAGATTTGTTGAAAATGGCTGTCCCCTTGATCGGTGACTAT
ATCAAAGCACAGGAAGAATATCTCCACAATGCCGTTAAAAATATCACAGA
TTACGTGGGTGATATCACAAAGGAATTATTATCGACCAAGATGGAATACA
GTCTAAATCTAGCCTGTAAACAAGTTCAATATCAGCCTCCAGTTACGTGT
CTCACGTCAAAGAAGAAACATgaaaaattacgcatgcgtaatgAGCAAGC
AgaaagaattcttcaaaaatGCGAGCAATTGAAAGAGGCATTAACAGCCT
TAGAACCGGTTTCTAGAAAAACGAAATTCAAGAAACGTTTCGAGAGCAGA
CGTGAtgctatgaaatattttttgagcacTCGAAAGTCGGATTCTGAGCT
AGATTTTGATATAAGCACAAGAGGTGAATTTATTGTCGAAGAATTACGTA
ATGATTTGAATAGTCAATATTGGTAAGTGATATCACAAAGGAATTATTAT
CGACCAAGATGGAATACAGTCTAAATCTAGCCTGTAAACAAGTTCAATAT
CAGCCTCCAGTTACGTGTCTCACGTCAAAGAAGAAACATgaaaaattacg
catgcgtaatgAGCAAGCAgaaagaattcttcaaaaatGCGAGCAATTGA
AAGAGGCATTAACAGCCTTAGAACCGGTTTCTAGAAAAACGAAATTCAAG
AAACGTTTCGAGAGCAGACGTGAtgctatgaaatattttttgagcacTCG
AAAGTCGGATTCTGAGCTAGATTTTGATATAAGCACAAGAGGTGAATTTA
TTGTCGAAGAATTACGTAATGATTTGAATAGTCAATATTGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000338_pilon | genome | sc0000338_pilon:268513..274383 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 532-897:5506 |
| Aaloc | 370-528:1474 |
| Aaloc | 148-366:866 |
| Aaloc | 1-144:1 |
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