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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000338_pilon:217889..220583+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036688 ID=XLOC_036688|Name=XLOC_036688|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2695bp|location=Sequence derived from alignment at sc0000338_pilon:217889..220583+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGGCTACGAACAACTGTATCCAAGCTATTAACCCTTGGTGGTTT
AACTGTTGCTTCAGGAAGTACACTTGCATATTATCGATATTCACTTTTGG
GAGAAAATGCTGAATGCAGGCCACATGCACCAAATGTAGAATTCAAAGAT
ACAGACACAATCGTTTCTGAACAGAAATCTCAAAAACCTTGGGATGATGA
TTGGGACCGTCGTAAACAAATCCGtagtaagaaacttaaagaaGACCCAC
CTATTGTTGTCCTTGATAAAGACGGTGACTTGAACACTATACCTGCAACA
CCACCAAAGCCTGTGGAACGAAAACCTACCGCTACTAGACACGTCATTTT
AGTTCGCCATGGTCAATATGAAATGGACCACACTGATAAAGAGAAGAAAA
TCTTAACTCAACTTGGAaggtttgtttatttgatttttgtaatttaGTTA
TTTCCGTAGGCCTCGTTAGGGTATGTTAAAATCATCTGAAAGTATATTCG
GGATGTAAGTTTTTACCAGTGCTGGAAATAAGGAAATTTCATGAATTCAT
CTTAAGataatactgaggttaagcataccaggataatcacgacgacggac
gaaaagtgtaataggctagtgaaaatacgaaatttgattggttgaaactc
actagcctgttaaattttcgttcgtcgtcgtgattataccgatttactta
acctcgctaatattCAAAGTAGATCAAAAATTGGTAGATTAATATTTACG
AAAGAAACCTATAAGACATTTAACCGGAGAAAGTGGAAAAGTAAGCTTCA
GAATGACCGGTAGAAACTACGAAGTGACCGGGTAATTACTCGccaccggc
cgttatttgcagcactgcttTACAACTGTCCCCGACAGACCGGCTGATTG
GGATTTCTACTAATTTAGACTTGTAACCATAACCTCCTTAAAAATAAgat
tcataaattattttattttcagagaGCAAGCGTCAGTCACAGGGGATCGT
TTAAAAGCATTAAACATCAAGTTTTCACGAATGACTGTATCTACAATGGT
GCGAGCACGTGAAACAGGAAGCATTATCAGTGAGAAGATACCCGACATTC
CTCAAGAACATTGTTCTCTGTTACGCGAAGGGGCGCCTTATCCACCAGAA
CCAACCAGTAAAGCCTGGACACCAGATCGATCGGTATGTTTCATTGTTAA
ACACACATAGTTgtccttttctttttatagtgttctttcaagttaaattt
ttacattagcAGTCACACAAGTGTCTGTATTTAACCGAAAGAAATCAATA
ATGCAGTTAAATGTTCGTAGATATTCAGATAATTTAAAACTGTTGGTGTT
GTTATTTTATGACTAAATTAAAGGAcccttttggacctacctggaggtcc
tataaattaacccatgtccgttcgttcgttcgtccgtctgttaccagctt
ttctcgagattggctcgttagttttctctgatttttggcacaaaggcgCA
AAATAGTAATTTTCCGGTattaaatcatcaaaaacaggtGTGTGGAGTGG
TCTTTCGAAAAGCATTGAGAGCAGTTGACAGTTGATTGAGAAACGGAACG
TTGCCTAACCGTGACAACCGTAGATGTACAGGATAGGACCTTGACGGACT
GATTTTCTTCTCGAAAAAATAACCTTAATCTACTGTTTTTCAGCAGACTT
TCTTTCAAGACAATCCACGAATCGAAGGTGCTTTCCGAAAGTACATCCAT
CGTGCATCACCATCGCAAACAGAGGATAGCTATGACTTGCTTGTTTGTCA
TGGCAACGTCATCCGATATTTTGTTTGCAGGTAACGTCGATTTATAAACc
agtttttcaagttttgttttCACAGTAAAAAGGTAGAGTGCCCCTGAAAA
ACGTATTTATGGATTGGATGGGCCGGGTCAATTATTAGAGTTTTCATGTT
GCTTAAAGTCTTTTCATTTTCCTGGAACACCAAGTTTGATGATGCCCTTT
CTCAGAAAATATAATCATCTGTAAAAATTAATTCAATTTGCGCTGCAATC
TGTTCTAAACTTAAACTCTTTTATTTTATCATACTATTATGGTAGCTGTC
TCGAGGAGCATTGTGTGCGTTCAAAAACACTTAACCGGCGTTTGCAACGA
CAGGAACCGTCTAGTTTGCTCTAAACCAGGGGGgagggtcggtagtaaaa
tcttttttatattgacaaaaaatttcgagaattctTTGTTTgcaagtcat
ccaaaaaattaaaagaattacaaaaaaagctaaaatttgctaattttacc
agttttaactacccaggtagtaaatttttttcaacatttaacacatagat
accacccattttaggaTTTAACTACCATGGGTAGTAAAggtttttttcga
attttcgtcacaccaccaccatagtaaacgtcattatgtctgagatttta
ctaccgacccccccctgtcTAAACTGAAACTcattcatttttggaaaaaa
atcgcgaGAATGATCTTTCAATTTCATACTTTTATACATTTCAGGGCACT
GCAATTTCCGCCAGAGGGTTGGCTTCGAATGAGCACAGGAAACTGTGGTT
TGACCTGGCTGACGATTCGACCCAACGGGAACGTTTCTTTACGGAGCTTC
GGGGATACGGGACACTTGCCCCCAGAAATGGTCACATTTACTTAG Coding sequence (CDS) from alignment at sc0000338_pilon:217889..220583+ >XLOC_036688 ID=XLOC_036688|Name=XLOC_036688|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1836bp|location=Sequence derived from alignment at sc0000338_pilon:217889..220583+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGGCTACGAACAACTGTATCCAAGCTATTAACCCTTGGTGGTTT
AACTGTTGCTTCAGGAAGTACACTTGCATATTATCGATATTCACTTTTGG
GAGAAAATGCTGAATGCAGGCCACATGCACCAAATGTAGAATTCAAAGAT
ACAGACACAATCGTTTCTGAACAGAAATCTCAAAAACCTTGGGATGATGA
TTGGGACCGTCGTAAACAAATCCGtagtaagaaacttaaagaaGACCCAC
CTATTGTTGTCCTTGATAAAGACGGTGACTTGAACACTATACCTGCAACA
CCACCAAAGCCTGTGGAACGAAAACCTACCGCTACTAGACACGTCATTTT
AGTTCGCCATGGTCAATATGAAATGGACCACACTGATAAAGAGAAGAAAA
TCTTAACTCAACTTGGAagATGTCTCGGCTACGAACAACTGTATCCAAGC
TATTAACCCTTGGTGGTTTAACTGTTGCTTCAGGAAGTACACTTGCATAT
TATCGATATTCACTTTTGGGAGAAAATGCTGAATGCAGGCCACATGCACC
AAATGTAGAATTCAAAGATACAGACACAATCGTTTCTGAACAGAAATCTC
AAAAACCTTGGGATGATGATTGGGACCGTCGTAAACAAATCCGtagtaag
aaacttaaagaaGACCCACCTATTGTTGTCCTTGATAAAGACGGTGACTT
GAACACTATACCTGCAACACCACCAAAGCCTGTGGAACGAAAACCTACCG
CTACTAGACACGTCATTTTAGTTCGCCATGGTCAATATGAAATGGACCAC
ACTGATAAAGAGAAGAAAATCTTAACTCAACTTGGAagagaGCAAGCGTC
AGTCACAGGGGATCGTTTAAAAGCATTAAACATCAAGTTTTCACGAATGA
CTGTATCTACAATGGTGCGAGCACGTGAAACAGGAAGCATTATCAGTGAG
AAGATACCCGACATTCCTCAAGAACATTGTTCTCTGTTACGCGAAGGGGC
GCCTTATCCACCAGAACCAACCAGTAAAGCCTGGACACCAGATCGATCGa
gaGCAAGCGTCAGTCACAGGGGATCGTTTAAAAGCATTAAACATCAAGTT
TTCACGAATGACTGTATCTACAATGGTGCGAGCACGTGAAACAGGAAGCA
TTATCAGTGAGAAGATACCCGACATTCCTCAAGAACATTGTTCTCTGTTA
CGCGAAGGGGCGCCTTATCCACCAGAACCAACCAGTAAAGCCTGGACACC
AGATCGATCGCAGACTTTCTTTCAAGACAATCCACGAATCGAAGGTGCTT
TCCGAAAGTACATCCATCGTGCATCACCATCGCAAACAGAGGATAGCTAT
GACTTGCTTGTTTGTCATGGCAACGTCATCCGATATTTTGTTTGCAGCAG
ACTTTCTTTCAAGACAATCCACGAATCGAAGGTGCTTTCCGAAAGTACAT
CCATCGTGCATCACCATCGCAAACAGAGGATAGCTATGACTTGCTTGTTT
GTCATGGCAACGTCATCCGATATTTTGTTTGCAGGGCACTGCAATTTCCG
CCAGAGGGTTGGCTTCGAATGAGCACAGGAAACTGTGGTTTGACCTGGCT
GACGATTCGACCCAACGGGAACGTTTCTTTACGGAGCTTCGGGGATACGG
GACACTTGCCCCCAGAAATGGTCACATTTACTTAGGGCACTGCAATTTCC
GCCAGAGGGTTGGCTTCGAATGAGCACAGGAAACTGTGGTTTGACCTGGC
TGACGATTCGACCCAACGGGAACGTTTCTTTACGGAGCTTCGGGGATACG
GGACACTTGCCCCCAGAAATGGTCACATTTACTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000338_pilon | genome | sc0000338_pilon:217889..220583 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 769-918:2546 |
| Aaloc | 631-765:1694 |
| Aaloc | 421-630:974 |
| Aaloc | 1-417:1 |
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