|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:327704..331764+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036687 ID=XLOC_036687|Name=XLOC_036687|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4061bp|location=Sequence derived from alignment at sc0000006_pilon:327704..331764+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGAAGACATTCAGAGCATATCTTCCACAGTCAGCTTACAGAAAATA
TAGCTGTGTCCACTGTAGAGCACACTTGGCAAGTCACGATGACCTGATTT
CAAAGGTATTCATCTACTGATTATTTTAGAAAGGTTCTTGTGGCAGTATT
TTACATAAGAAGGTTTTCATTCTGAGGGTTTATAACTCTAACAGAGAGTA
CCTCAATAAAAGCTTTGAACACAACTTctgataaaatttcttttagcCAG
ACAACTTATTATTTTCTGGCAGTCTGGAGGAAAAGCtcattattatattt
ttcttcctttagtcATTCCAAGGAAGTCAAGGAAGAGCTTATCTATTCAA
TTCTGTGTAAGTTTTTCATGTACTTCTAGCCAATAATGGAATCCGTGTTT
GAGACTACTCGAACAtggaatgggccattccagaacatttttgttacccc
cgtcggacgacgtgcatttttaaattttttctagcattggaaataatttt
ctttttcagtggtggtcggaaattcccataaaaatccatgtacttttgca
aaatgcatagGAAAATCCACTCTTTTCTGcctttttcaattcaattgcct
tggaaattcatacactTTCTtttctcgccttggaaatttcgaattttggt
gaaaacttttgccctcgaaAATCCTGTGTCAtccgcccccctgttacaga
caaattctgaaATGGCccaagaagaaaatgtatgaatttccaaggcaatt
gatttaaaaaaggcaaaaaagagtggaatttctgaCGCATTTTGAagaag
tacatggattttcatctGAATTTTTGACCaccattggaaaaaaaaaaaat
ttccaaggctagaaaaaataaaaaaatgcacgtcgtccggcGAGGGGGTA
AcagaaattttctggaatggcccaatggcAACCTTTAACCTTTCTGTCTG
TAGAGGGAAATCAATCTAAATGAGTTCTTTTCCATAAGATTCCCTTCTCC
GTTATAAGCCTTAGAGAACGAAATTTCATATACTAAACAGTCcacttttg
aactttttattcaGAGTTAGGTAAGGCAGTTGCAACACTGGATTTTACTG
GTGTTTTTAATTGAATTCAGACAAAgcaataccgtgagtggtcctaaatc
caacagccctgcctaaatccgatagggtctttcaaagatacaaactaaaa
ttaaaacaaacctttcgctgtgacgcaatgaagataccaaagtgccaact
aaactgagagatttgatacattgcaCCAAATGAGCCAAAtagaaataaca
ataattgcttcttatagaaaacataattctttattgcaatatgtacaacg
tcataaatgacaacagcaataaaacagcatcataaaatgtaatttttttt
acgattcacactttttaaattACCAACATAAATCggcatcttgacattat
agccatattgttagatgttttgtttcgagagttcatgcaatagtttatcg
ttcaacttgaaGAGGGAATGTTTATAAACATAGAATCTTTTTCATAACAg
ctatttggggggtcggaattaggcagggctgtcgggtTTAGGACAGGCTG
TCGGGTTTAAGACCACTCACGGTAGGTCTTTTCAAGGCTACCATACTTTA
TACACCTATAACAATCAAAAAGTTCCCTAAAGCAATCAAAAGCGCCAAGA
TGACAAAAAGTGGCTTTACAGTACTGGAGCACTTTATatttgattgagat
tgtctgaAGACAAATATGTTCTCAAATAATAGCCTTACTTTTGACCAAAA
TTGAGACAGAGAGAACCACCTTTTACATTTTGTTCTTGCATCCATTCTTT
TTGTGCATGGGCTTTAATAACACTTCAGAAAATTCTATCAATTTTCTTAC
ATTGACCAGAAAAAGAAGCATTCTTTTCTTAAAttcatttgtttaaaaat
gtttgtgatttttttatcttttggatcatgatacatttttttattgttta
taagtAAACATTTATAATTATGCAAAGGAAAAAAGGAGATTAGGCTAAAT
ATGTTGATTCCCGATCTTAAATTGTTTGATGATACTTTCTACTCATCAGC
ATGCTATTTTTACAAGAAACTGTTATGTGTATAAATTTATCTTGCTGTGA
CTTGATGAAATCTCAATTCAAGACATGCGTCCAAAACAATTAATTTTATT
ATATAACATTGCAATCTGATACCTTAAAAGTATTATAGCACTTAATAGAA
ACTAAATTACACACAAAAATGTTTAATAAGGTTTGTCTAAAGCCTTGTCA
AAGTGTTTAAAAGATGATTTTGATATGtacgaaaataatcaaaaaggtta
tttattttctttctttttatttaagcCTAAATGTTGGTTGTGGCCCTGCC
GAGGAGAGAATTTTATTAACTGGATTACATGCTGTAGCTGATATTTATTG
TGAAAATTGCAAAACAACCTTAGGTTGGAAATATGTAAGCCATTTTATTT
TTCCCAAATTATAAGTTGAttgcttttttaattatttgtaATTGATCTAC
CATTTATATAAATGACCATGTTGCAAGAAAGCTCAGATCACGGTATCATA
CAAAGATATTTCTTGTCACAAGTGACAATCTTTGAATCAGACTGCTACAA
TAGAATTAAGCATATTTTTCTCACATGAAAACatgctttttaataaaaaa
aaatacatgaaaaggATCAGTTGACTTCCTTCATGAGGTATAAATAATTA
AGAAATAGAATCAAATCATTGAATAGtgttttgctgattttttaaatcaa
tactTTCTTATATTCGGTATCAAAGTGATGTTATGGAGCAGGTTGTATTC
AGCTTGAGAATCATCCCTCCTTAGAACCACCTTTCCGATATCACAAAAGT
CAATGATAATTGCATAAAGCCATAGCAACAAACGTTATTTTTAACATCGT
TGAGTTATTTTTGGGATTGAAATGAACAATTTCAACAGTATCAGGTGAAT
CTTCTGTCAGAAGtccaaaaataaggaaaaaaaagtCTAACATTTACTAG
TAATAAATTTCAtgaagaaaataatatttttcccgTGTTTGTGAAATctg
aattaattttttgttctcCCGATGAAAAGAATTGATTTGAGGAAATATAA
TTTCTTCCTTGAATTTAATAACGTTTCTTTTGCTCAAGgacgaaaaaaat
gaaatcacaaGAAACTTCAATATTAAACGTATATATTAGAAGATTTGTCT
TCCTAAACCAACACTAAAAAACCTGCCTTTAAGAATATATATTCtcaaag
aaaagcaaaacaaaaatagagACAGCTTATCTTAATTTGACGACAAAATG
AAGACAAGTAATAACTTGTGATTATaaaaaaaGCCAGTCAGATATTCTAG
TATCCCCTTTTTCgtctaataaaaacaaaagtatgTCAAACTTTGCTata
aatagttttgaaatgatATTTTATGTCAGGTATACAAAAGGTTGTACTAA
GTTAACAAAATCATATGTACTTTTCACCGGtcaaaaacttaaaacaaaat
gcttttaatGTCTTTCTATGCTTGTGTATTTCTAGCATCATACCATCCCG
TGTCATACTGTTGATATGGTTTTTAGGGATATTAGTTATCACAAAGCCTT
TCAATCATCTTAGATTACCTCCCAGCCCTTgctatttcttttcaatttga
GTTGAATTACATTTAAAACAGTCCATTCAGCAAAAATGAAACTATCTTAA
AAGTATCTTGTATCTGAAAAAgcaaattaaaattcagaaacaacgcATGT
TaagctaaaagtcaaaaacattaaaGCACTGGTCTTGACAAGATGAATGG
GATGCCACAGAGCGTGGAACTACTTCCAAGTATAATCCAGAAATCACAAG
CATCAACATTATTGGAAAACTACAAGCTTTAAATCAGCGTtagtaatcaa
ttttttttatttcttctgtAGGAACACGCATTTGAAAGCAGCCAAAAATA
TAAAGAAGGTAAATTCATTATTGAAATGGCACACATGCTCAAAGAAAATG
GCTGGGAATAA Coding sequence (CDS) from alignment at sc0000006_pilon:327704..331764+ >XLOC_036687 ID=XLOC_036687|Name=XLOC_036687|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=696bp|location=Sequence derived from alignment at sc0000006_pilon:327704..331764+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGAAGACATTCAGAGCATATCTTCCACAGTCAGCTTACAGAAAATA
TAGCTGTGTCCACTGTAGAGCACACTTGGCAAGTCACGATGACCTGATTT
CAAAGATGGTGAAGACATTCAGAGCATATCTTCCACAGTCAGCTTACAGA
AAATATAGCTGTGTCCACTGTAGAGCACACTTGGCAAGTCACGATGACCT
GATTTCAAAGtcATTCCAAGGAAGTCAAGGAAGAGCTTATCTATTCAATT
CTGTtcATTCCAAGGAAGTCAAGGAAGAGCTTATCTATTCAATTCTGTcC
TAAATGTTGGTTGTGGCCCTGCCGAGGAGAGAATTTTATTAACTGGATTA
CATGCTGTAGCTGATATTTATTGTGAAAATTGCAAAACAACCTTAGGTTG
GAAATATcCTAAATGTTGGTTGTGGCCCTGCCGAGGAGAGAATTTTATTA
ACTGGATTACATGCTGTAGCTGATATTTATTGTGAAAATTGCAAAACAAC
CTTAGGTTGGAAATATGAACACGCATTTGAAAGCAGCCAAAAATATAAAG
AAGGTAAATTCATTATTGAAATGGCACACATGCTCAAAGAAAATGGCTGG
GAATAAGAACACGCATTTGAAAGCAGCCAAAAATATAAAGAAGGTAAATT
CATTATTGAAATGGCACACATGCTCAAAGAAAATGGCTGGGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:327704..331764 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 259-348:3972 |
| Aaloc | 151-258:2377 |
| Aaloc | 106-147:313 |
| Aaloc | 1-105:1 |
|
