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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000003_pilon:784552..786226- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036673 ID=XLOC_036673|Name=XLOC_036673|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1675bp|location=Sequence derived from alignment at sc0000003_pilon:784552..786226- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCTACGGAGCCACCTTCAAGTGCTATACGAGTTTTCAACACCCA
GAGTATAGACAGGGATACTCGTCTCTTTCCGTTGACACTGAGGAAGACTA
GTGACTCATCTATGTTACTGGAAAATGGTGCAGGGAAGTCGACAGACTAT
TTTTATAGTTTGTATCAGAATGCAAAGAAAACTATACAAGAAAAAGAAGA
ACAAGTTGAAATTTCGAATGAGCTTTCATCTATACCATCCTTATCACCGA
AGCTGGTGAAGAAAGAAACAACAACAAATCTATCGCGCTCTACGTCTCTA
TCTTCAACAGAAACTGGCTCTTCAAGTCATCGATCCTTATCTCCTCCGAA
GTCTGATTCACCTCTCGTTGCAATGAATATCATTGGATCCGCAACTCCTA
GACCATCATCACCTCCAGAGCTATCGTCAATCAACCTCGATGACTATTCT
GAAAGCAGACTCAGTGGCGATCCCAAATTCTTGGATTTCATCAGATCCAC
ATCAACTCTTTCAGCCAGATCTTCACCAAGGATTGAACAACCAACACCTC
CAGATTCTCCCAGATCAGCACAAATATTCTCGTTCAATCCTCACAGTCCT
TCCAGACTTGCTGTACTTGATAGTCCACAACACCATACCACTGAACCATC
ACAGCGTCTCAGTAGATTCGATAGTCTACACCGGCCAATCACTTCAACAT
TTCATTCTAAACAAGAGTCTACAAACGTCGATAGTCTTCACCGTCCTCAA
GAATGTTTAACAGGAAATTGTAAATACCTCTTCCCGTCTGAACGATGCCA
CGTATGCAGGCCTGATGAATTCCTTTATCAGAGAGGTAACTTCTAATGTT
CAATTCTATTTTCATAAAGGCTTCATTTTCCTTTTTCTTAACAAAAATTA
TTAACAATCTACTCGAAATCAAATCGAAGGCAGAACTTCGAAATTAAGAT
CCAGCTCTTACTTTTACTGGTAAAAGGCACCAGTCACGGGGGGGGGGTAC
TCAGGCAAAAATGGTGCTGGGTATGTGTGGATTGACGGCAAGGGTCTGTT
TTTTCACCCTTCAAAGTCTCTCTAAGGGTTTCAAAATCGAAGAAAGGGTT
ACCTTTTCGGGAAAAATCAGTCTCTCTAAGGGTCTGGTTTAGGAGGTCCA
ATCCGCACATACTCCTCATCCGCCAACCCTAGTACCCAATTCAATTCAAT
TGATTTTATTTGAAAAGATCTCTTCTAAAATTGAAATGAAAATCCAGTTA
ATTTGCAGAGGATAGTGGTATTTAAGATTTCTAATGATTATTTGTTGTGT
TATTTAGCTTTCTACAGCAGTGAGTTTCTACTCCGTCAAAAAGAAAAATG
GCGTCGGCCACGAACGGTTTACACTGAGAAGCAACTGGTTTCTCTTGAAA
AAGCGTACAAGAAGAACAAATATCTTCGCGGTGAAGAAAGAAAGGCATTA
TGTAAAACGCTTAGCCTGGAGGAACGTCACATTAAAGTGTGGTATCAGAA
TCGACGGGCTAAGGAGCGCGGACAAATTCGCCATGATAAATGGCTACAAC
GTTCCAAACGCCATCAACTCTTAATGGCTCAACAACAAAAACAGAAGCTG
AAACAGAAAGAAAAGCAAGAAAAAGTAAATGCTAATCAAGAAACTGAAGC
TGATCTAACTCAACAGGATAAATAA Coding sequence (CDS) from alignment at sc0000003_pilon:784552..786226- >XLOC_036673 ID=XLOC_036673|Name=XLOC_036673|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2406bp|location=Sequence derived from alignment at sc0000003_pilon:784552..786226- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCTACGGAGCCACCTTCAAGTGCTATACGAGTTTTCAACACCCA
GAGTATAGACAGGGATACTCGTCTCTTTCCGTTGACACTGAGGAAGACTA
GTGACTCATCTATGTTACTGGAAAATGGTGCAGGGAAGTCGACAGACTAT
TTTTATAGTTTGTATCAGAATGCAAAGAAAACTATACAAGAAAAAGAAGA
ACAAGTTGAAATTTCGAATGAGCTTTCATCTATACCATCCTTATCACCGA
AGCTGGTGAAGAAAGAAACAACAACAAATCTATCGCGCTCTACGTCTCTA
TCTTCAACAGAAACTGGCTCTTCAAGTCATCGATCCTTATCTCCTCCGAA
GTCTGATTCACCTCTCGTTGCAATGAATATCATTGGATCCGCAACTCCTA
GACCATCATCACCTCCAGAGCTATCGTCAATCAACCTCGATGACTATTCT
GAAAGCAGACTCAGTGGCGATCCCAAATTCTTGGATTTCATCAGATCCAC
ATCAACTCTTTCAGCCAGATCTTCACCAAGGATTGAACAACCAACACCTC
CAGATTCTCCCAGATCAGCACAAATATTCTCGTTCAATCCTCACAGTCCT
TCCAGACTTGCTGTACTTGATAGTCCACAACACCATACCACTGAACCATC
ACAGCGTCTCAGTAGATTCGATAGTCTACACCGGCCAATCACTTCAACAT
TTCATTCTAAACAAGAGTCTACAAACGTCGATAGTCTTCACCGTCCTCAA
GAATGTTTAACAGGAAATTGTAAATACCTCTTCCCGTCTGAACGATGCCA
CGTATGCAGGCCTGATGAATTCCTTTATCAGAGAGATGTTTTCTACGGAG
CCACCTTCAAGTGCTATACGAGTTTTCAACACCCAGAGTATAGACAGGGA
TACTCGTCTCTTTCCGTTGACACTGAGGAAGACTAGTGACTCATCTATGT
TACTGGAAAATGGTGCAGGGAAGTCGACAGACTATTTTTATAGTTTGTAT
CAGAATGCAAAGAAAACTATACAAGAAAAAGAAGAACAAGTTGAAATTTC
GAATGAGCTTTCATCTATACCATCCTTATCACCGAAGCTGGTGAAGAAAG
AAACAACAACAAATCTATCGCGCTCTACGTCTCTATCTTCAACAGAAACT
GGCTCTTCAAGTCATCGATCCTTATCTCCTCCGAAGTCTGATTCACCTCT
CGTTGCAATGAATATCATTGGATCCGCAACTCCTAGACCATCATCACCTC
CAGAGCTATCGTCAATCAACCTCGATGACTATTCTGAAAGCAGACTCAGT
GGCGATCCCAAATTCTTGGATTTCATCAGATCCACATCAACTCTTTCAGC
CAGATCTTCACCAAGGATTGAACAACCAACACCTCCAGATTCTCCCAGAT
CAGCACAAATATTCTCGTTCAATCCTCACAGTCCTTCCAGACTTGCTGTA
CTTGATAGTCCACAACACCATACCACTGAACCATCACAGCGTCTCAGTAG
ATTCGATAGTCTACACCGGCCAATCACTTCAACATTTCATTCTAAACAAG
AGTCTACAAACGTCGATAGTCTTCACCGTCCTCAAGAATGTTTAACAGGA
AATTGTAAATACCTCTTCCCGTCTGAACGATGCCACGTATGCAGGCCTGA
TGAATTCCTTTATCAGAGAGCTTTCTACAGCAGTGAGTTTCTACTCCGTC
AAAAAGAAAAATGGCGTCGGCCACGAACGGTTTACACTGAGAAGCAACTG
GTTTCTCTTGAAAAAGCGTACAAGAAGAACAAATATCTTCGCGGTGAAGA
AAGAAAGGCATTATGTAAAACGCTTAGCCTGGAGGAACGTCACATTAAAG
TGTGGTATCAGAATCGACGGGCTAAGGAGCGCGGACAAATTCGCCATGAT
AAATGGCTACAACGTTCCAAACGCCATCAACTCTTAATGGCTCAACAACA
AAAACAGAAGCTGAAACAGAAAGAAAAGCAAGAAAAAGTAAATGCTAATC
AAGAAACTGAAGCTGATCTAACTCAACAGGATAAATAACTTTCTACAGCA
GTGAGTTTCTACTCCGTCAAAAAGAAAAATGGCGTCGGCCACGAACGGTT
TACACTGAGAAGCAACTGGTTTCTCTTGAAAAAGCGTACAAGAAGAACAA
ATATCTTCGCGGTGAAGAAAGAAAGGCATTATGTAAAACGCTTAGCCTGG
AGGAACGTCACATTAAAGTGTGGTATCAGAATCGACGGGCTAAGGAGCGC
GGACAAATTCGCCATGATAAATGGCTACAACGTTCCAAACGCCATCAACT
CTTAATGGCTCAACAACAAAAACAGAAGCTGAAACAGAAAGAAAAGCAAG
AAAAAGTAAATGCTAATCAAGAAACTGAAGCTGATCTAACTCAACAGGAT
AAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000003_pilon | genome | sc0000003_pilon:784552..786226 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1168-1206:40 |
| Aaloc | 838-1164:367 |
| Aaloc | 1-834:1676 |
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