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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000003_pilon:729959..732165+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036669 ID=XLOC_036669|Name=XLOC_036669|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2207bp|location=Sequence derived from alignment at sc0000003_pilon:729959..732165+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACAAGAGACTTCAATGACTAGACAAACCATTAACTTCGTGCAGCAAGC
AATCACCACAATGATTTCTACTGTCATGGAAACTGTCATGAATGGCACCA
GCGGCAAAATCATATGCAGCATCTTGCTCGAAGTCTCTGTTTACTACGTC
CTCTACGTTCCAATTATGATTAAATATAAACTATCCAAGAAGCTAACAAA
AATATCTGATGCACTCAGTCAACCTTTCACTGTTGTCTTAACTTTGAAGA
AAGCGGTCATCATCTGGATATTGGCAATATCGTTTTCCATTTTAATGTAT
ATGAATTATGATTATTGCTTCGAAATTATCGGGTAAGTTAAACTCCTCTA
ATAATCTTAAAATGTTATCCTCCTCCTCCCAATTTTAGTTTTGAGTAAGC
CCTCCTTTCAGATGTGTTCAAACCTATATAAGACAATGAAATTAGattct
attgaaaagaatttattattatattatcttttttatctattaaatagaac
ttattattttattattttttagacaattgtttgatttCTTCGGACAATTT
TGGGAACCTGAGTACAAGCCAACGACCCTGGAAAGTGCAGTGAGCTGGTT
TGGAATCGGTAGCCAAGTCTTCAAAGCTAAGCGAGAACCTATTTTCGTTA
AAGTTTGGATGGACTGGCTATCTACCAACTATCCTATAACCTCAAAAGTA
TTGGCTTTCAGCAGCGTGGTATTGTCACCTTTAGCCTATATTCGTATGCC
CATAATTGTCGCTGCCATCATTTTCCTGGTCCATATTATTGGTTCATTGA
CAACAGCTATACTAAGTACAATCCGAAATATCATTGGACAATCTTCATGG
AAATCTATTATTttaacgatgacgtcatcgctcGCAATGGTACTGTACAT
CAATTATGGTCATGCAACAATTTTAGGGTATGTCATTGCCAACAATGCTT
TCTGATACatgctaaatatttttacaagcaTTTTGGTAAATAAACATATA
TATAAGGGAATGAACGAACCAGAGGGAATAGCTAGCTCATTTGGTTAGAC
GTGCGCTTCCCCATACAAGGGGGTCCCCATATAAATTGTCAATCATCAAC
GTTCTCCTTGGAAGataatgaatgaaaaagtttcttCTCGATGGTCTCAA
GGAGTTTGATGCACATAAGTTATTAGTTACTAAATGATTGCTGAGTGCAG
GCCCGAATCAGTGATAACTTAACTGTATAGTTAGCGCAAGCTACAACTTG
GCCTTTGGTGTTTGCCGGTCatacaaacaaaaacataaaattatatCAAC
GTCCGTCAAACGTCTAGATGTGAGACGGTAGCTCGATAATTGAATTCACA
TTTCTATTTAGATATATTCCATTCCTACTACAAGGATCAAATGTAGTCAT
CAAACTTGGCATTAATTTGATTTCAAACATCATTGAAGTATACGTTAGCT
TCTTCATGGCAATTATCTTACCACCGCTGATCATTATGTCTATTGCTGAC
TTCCAAGCTGGAATCTTACTATCTAAAGTCCTCGGTATGATTTCAAGAAA
CGTGACAAAGAGAAATGCATTTTTGGTTTTGAGGGTTTCAGTGTTGGTTT
TCTGCTGTACAATCAGCCTTAATGCTAACGCTGCAGCCTTCATCTTCAGG
TAAGGGCTTTCTACCAATTTACTTTGCTTTCTTTGACAGATGATGGAAAA
GCGTATGAATCCCTACCCAAATCAGACAGGATTAATTAACTCaaacctct
actattcgaatctttcaaataattcgaacaaaaatattGGTCATCTCAGC
TAGAAAGTAGTATataatactctctgtaatttggATCCTTTTCtatttcg
aagaaaattcttggttccttcccagctggcacacaacgtcgtttcaacgt
tcatctaacgttatatggacgttgtgaacattagatggacgttgaaacaa
cgttgtgtgccagctgggttaaagatcgaattggagagagtcaactgtat
tttatTTGAAGTTATAAGCTGCTATTGGTTTTGGGAATCTCATCCAATTT
ATTTTCTCCTTATAGATATACACCGATCCTTGTGAATCACGTGATCAGTT
CAACCTCATACGTCATCTCGCTCTACGTCAGTCTCCTTTTCGCTGTCATT
CTACCGCTGTTCGTCATTTGGGCGCAAATCAAGTTGTCCAATAAAATCTC
TCAATAA Coding sequence (CDS) from alignment at sc0000003_pilon:729959..732165+ >XLOC_036669 ID=XLOC_036669|Name=XLOC_036669|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2334bp|location=Sequence derived from alignment at sc0000003_pilon:729959..732165+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACAAGAGACTTCAATGACTAGACAAACCATTAACTTCGTGCAGCAAGC
AATCACCACAATGATTTCTACTGTCATGGAAACTGTCATGAATGGCACCA
GCGGCAAAATCATATGCAGCATCTTGCTCGAAGTCTCTGTTTACTACGTC
CTCTACGTTCCAATTATGATTAAATATAAACTATCCAAGAAGCTAACAAA
AATATCTGATGCACTCAGTCAACCTTTCACTGTTGTCTTAACTTTGAAGA
AAGCGGTCATCATCTGGATATTGGCAATATCGTTTTCCATTTTAATGTAT
ATGAATTATGATTATTGCTTCGAAATTATCGGAAACAAGAGACTTCAATG
ACTAGACAAACCATTAACTTCGTGCAGCAAGCAATCACCACAATGATTTC
TACTGTCATGGAAACTGTCATGAATGGCACCAGCGGCAAAATCATATGCA
GCATCTTGCTCGAAGTCTCTGTTTACTACGTCCTCTACGTTCCAATTATG
ATTAAATATAAACTATCCAAGAAGCTAACAAAAATATCTGATGCACTCAG
TCAACCTTTCACTGTTGTCTTAACTTTGAAGAAAGCGGTCATCATCTGGA
TATTGGCAATATCGTTTTCCATTTTAATGTATATGAATTATGATTATTGC
TTCGAAATTATCGGacaattgtttgatttCTTCGGACAATTTTGGGAACC
TGAGTACAAGCCAACGACCCTGGAAAGTGCAGTGAGCTGGTTTGGAATCG
GTAGCCAAGTCTTCAAAGCTAAGCGAGAACCTATTTTCGTTAAAGTTTGG
ATGGACTGGCTATCTACCAACTATCCTATAACCTCAAAAGTATTGGCTTT
CAGCAGCGTGGTATTGTCACCTTTAGCCTATATTCGTATGCCCATAATTG
TCGCTGCCATCATTTTCCTGGTCCATATTATTGGTTCATTGACAACAGCT
ATACTAAGTACAATCCGAAATATCATTGGACAATCTTCATGGAAATCTAT
TATTttaacgatgacgtcatcgctcGCAATGGTACTGTACATCAATTATG
GTCATGCAACAATTTTAGGacaattgtttgatttCTTCGGACAATTTTGG
GAACCTGAGTACAAGCCAACGACCCTGGAAAGTGCAGTGAGCTGGTTTGG
AATCGGTAGCCAAGTCTTCAAAGCTAAGCGAGAACCTATTTTCGTTAAAG
TTTGGATGGACTGGCTATCTACCAACTATCCTATAACCTCAAAAGTATTG
GCTTTCAGCAGCGTGGTATTGTCACCTTTAGCCTATATTCGTATGCCCAT
AATTGTCGCTGCCATCATTTTCCTGGTCCATATTATTGGTTCATTGACAA
CAGCTATACTAAGTACAATCCGAAATATCATTGGACAATCTTCATGGAAA
TCTATTATTttaacgatgacgtcatcgctcGCAATGGTACTGTACATCAA
TTATGGTCATGCAACAATTTTAGGATATATTCCATTCCTACTACAAGGAT
CAAATGTAGTCATCAAACTTGGCATTAATTTGATTTCAAACATCATTGAA
GTATACGTTAGCTTCTTCATGGCAATTATCTTACCACCGCTGATCATTAT
GTCTATTGCTGACTTCCAAGCTGGAATCTTACTATCTAAAGTCCTCGGTA
TGATTTCAAGAAACGTGACAAAGAGAAATGCATTTTTGGTTTTGAGGGTT
TCAGTGTTGGTTTTCTGCTGTACAATCAGCCTTAATGCTAACGCTGCAGC
CTTCATCTTCAGATATATTCCATTCCTACTACAAGGATCAAATGTAGTCA
TCAAACTTGGCATTAATTTGATTTCAAACATCATTGAAGTATACGTTAGC
TTCTTCATGGCAATTATCTTACCACCGCTGATCATTATGTCTATTGCTGA
CTTCCAAGCTGGAATCTTACTATCTAAAGTCCTCGGTATGATTTCAAGAA
ACGTGACAAAGAGAAATGCATTTTTGGTTTTGAGGGTTTCAGTGTTGGTT
TTCTGCTGTACAATCAGCCTTAATGCTAACGCTGCAGCCTTCATCTTCAG
ATATACACCGATCCTTGTGAATCACGTGATCAGTTCAACCTCATACGTCA
TCTCGCTCTACGTCAGTCTCCTTTTCGCTGTCATTCTACCGCTGTTCGTC
ATTTGGGCGCAAATCAAGTTGTCCAATAAAATCTCTCAATAAATATACAC
CGATCCTTGTGAATCACGTGATCAGTTCAACCTCATACGTCATCTCGCTC
TACGTCAGTCTCCTTTTCGCTGTCATTCTACCGCTGTTCGTCATTTGGGC
GCAAATCAAGTTGTCCAATAAAATCTCTCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000003_pilon | genome | sc0000003_pilon:729959..732165 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1027-1167:2067 |
| Aaloc | 739-1023:1363 |
| Aaloc | 334-735:524 |
| Aaloc | 1-330:1 |
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