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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:160696..163809+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036651 ID=XLOC_036651|Name=XLOC_036651|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3114bp|location=Sequence derived from alignment at sc0000010_pilon:160696..163809+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCAACTACTGTTACCATTTTGTTATAGTATTTGAAAAGGCTTTACTAAG
CTACCGAATCATTTTGAGTCCAAAAGATATGTCCAGTCAAGAAGAAAATA
TTCCTCCTGTTACTGATGGTAAGTTGATGTTGTTTATaaacatattttga
tttggatttatttgattttttaacattttgatccttttgttttCACCTAA
AATGCATGTAGAACATCCTGAGACCtaaattttggtgttaaaattatcaa
aagtaaGTTTTAACGAGTGCTTATGTTTATTTTATACAATCAAGTTTGAG
AAATGTTTAAAATTGACTAATTTTACCTATAGGCACCGAGTTGACTTATG
ACTACTGTATTGTGACTGAGACTCAAAACCTAAAGACATAACAACGACGA
AAACCTAACAACGTTACGACCACCTTTTTTACAACGACAAAACACGTATC
TTAATGATTTAACTTTACGCAGATTAGGTACAGAAAGAAATACAGCAAAA
TATATTTGTTAGCAATGAATTGTGAGCCCAAAGGGATTGAAATTAATCTT
CTCTTTTTCCTGGGAAAAAGCCTTACTAGCCTTTAGAGCGATTGAATGTT
ATTGAAGAATGAGTGATTCAACTTAATGACCCATCCTGCTTTGATAGAAT
TTTACcttttcatttgaatttttccaaaagtatcaaaagtatCGATTTTT
CCTTTCTTCGTTCCTTTGAGCGAGGAATTAGTTTATGTTTAAAGTTTAGT
TTAATGTTAAGTTTTATTACTTTTCTTAGGTGACAGTCAAACAACACaat
cttcaaaaacaaagaggATCAACAATATCAACTACGGTGGAAAAAGACTG
AAGGTCAGTAAGTTTATTTGCAAGTCTGGGTCCACTAGTGTAAATCatta
aatctgaaaaataacTTTGGGACaatcttcactttttttaaCAAGCTCAA
CATACTTAACATACTTTGTTAATGGTCAAAAAATGAAGCCGCTCaagagt
gaaaataaaaaatgttgcCCTTTTTGCACCAGCCATTTTAAAACTGGCTC
TTATTCCTGCAGATTTACATAAAATGAGAGTTGTATAAAATAAGCAGGGA
CTATACATTTCGGTACTGGACCAGCGCTGAAAATGtatacttttttgttt
ttctatctACAAAATATACATTTTCACCTCAAACTAACTCGGAATCTGTC
TACAAATTATTTCGAACCACCCCTTAGCCTTAGTACCAGGTATTTTCCAA
CGTGTTCAGaaggatttttttataagcataataattttcaggaaaagctg
TTTCCACgtttttattttacatagaaatatcatgaaatccCTCAATATTT
AGAGTGTGAAGGTTTTAAGCTTTTGTGGTATGACTGATCTTTGTAAATAA
ACGAAAGGGTCATGCACACTTAAGAAAAGCAAAAATCTAATATTTTACCT
CCTACTGTAGGCATTATCATatcgctaccttaattcaaaaggggcctaag
ttcAGGTACCCCCAgttcatttttatgaaatttgaattttttagcttttc
tcgatctctagattatttgctttcttttGATGTACATACCAAGtagtttt
caaggttaaaaaggctcaaaacttcatactgaagctcttataaaaatgat
gtttatttaattcaaaagaggcctaagtccatcatatttttagaataaag
ggccaagtccaccaaaataagtttgttaagttttaaaaaggcctaagtcc
aattGAATTGTGAATGGGCCTTAAGTCCATGCAttgtaaaaagtttaatt
tagtTTTCCTTTATTTTACTGAGATTGTCTTTTCCCTCTATCTTGAACCT
AGATGTAACTGGCTTTATTTTGGAGTGTCACATGTGCTGGTTTCGAACTT
TAAAAGGCAGAATTTAACCCTCACACATTTTCcaaaattcatgtttaatt
caaaaaaggccaAAGTCCACGCTGCaagatttacaaaaatatctactttc
caaaagaatgcctttttgttgaaaaaacaaGTTCGAgctatggctttcag
aaaacatttacttCGAAGCTTatcatcaaaaatggtttcagaataaagga
aaaactttgattgcaattttctcaaaatgaccaaaattgacttaggcccc
ttttgaattaaggtagcgatTATATACCCCCTACTAAGTATTAAGTAGTG
CTTTATCCATCAGACCCTTTCAAAAGgaaagactaaaaatgttggaTCTC
ACTCTTTAGTAGGGGGGAAGggttattttgcaatttttgaaaatttcaac
ttttgtctgtttttgccccaaaaatgtcaaaaatgttcattttcctaGAC
ACAATAACTAAAATCACTGCAATATCACTTTATTATGACCTGCCccattt
ttatagctttttatACTGGTAGTAGTGGTGTGACACATGACTTTTTTCAG
GACACCCTAAGTTTAGCTTGTGTTTGATATTATGTTGTTTTAGTATTTTT
TGGTGAGTGATAAGATGTTTAACCTTTTTTCCAGAAATGTGTTGAATGTG
ATCAATTTGCATTGAGTAACCGCTCTGCAAAGTGCCCCAATGGACATCCT
TTTCGCATCAAGAGAAAGCCCGTAGAAGCACCTCCTGGGTCAACGTGCGT
GACTACAGTTGATCGAGATTTGAAGAAAAGTGTGAGTTTTATTTTCGTGG
CTTACTACTCGATAGATGCGAGGGGTCAGTTCATCTTCCTTTTCCAtcaa
tgattttttcttttttaatgaaaggAATATAGCTTTGCGTTGCACCAGAG
TGCTATGTTATTATGTTACCCTTGTTTAAAAAATGGCCTGTGTCGCaaga
aatcaaaattcaatattcaatattcaatataaatgaatgaatgaatatga
aaactgtatataataatttttttttcaataggtAAAAACCTTAAATGAGC
ATCACCATTGGCATATTGTGACGCTACGAGCAAAACGTCACAAAAATGGA
CTGGAGTTCCGATATGAAGGAACCGAGGGATTCGGAGAGAACTTCATAGA
GGACCCAACCATAAACTCTGCCATTAAAAGGGCATTTGAGCCTCGATTCA
AAAGAGGTATTTGA Coding sequence (CDS) from alignment at sc0000010_pilon:160696..163809+ >XLOC_036651 ID=XLOC_036651|Name=XLOC_036651|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000010_pilon:160696..163809+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCAACTACTGTTACCATTTTGTTATAGTATTTGAAAAGGCTTTACTAAG
CTACCGAATCATTTTGAGTCCAAAAGATATGTCCAGTCAAGAAGAAAATA
TTCCTCCTGTTACTGATGTTCAACTACTGTTACCATTTTGTTATAGTATT
TGAAAAGGCTTTACTAAGCTACCGAATCATTTTGAGTCCAAAAGATATGT
CCAGTCAAGAAGAAAATATTCCTCCTGTTACTGATGGTGACAGTCAAACA
ACACaatcttcaaaaacaaagaggATCAACAATATCAACTACGGTGGAAA
AAGACTGAAGGTGACAGTCAAACAACACaatcttcaaaaacaaagaggAT
CAACAATATCAACTACGGTGGAAAAAGACTGAAGAAATGTGTTGAATGTG
ATCAATTTGCATTGAGTAACCGCTCTGCAAAGTGCCCCAATGGACATCCT
TTTCGCATCAAGAGAAAGCCCGTAGAAGCACCTCCTGGGTCAACGTGCGT
GACTACAGTTGATCGAGATTTGAAGAAAAGTAAATGTGTTGAATGTGATC
AATTTGCATTGAGTAACCGCTCTGCAAAGTGCCCCAATGGACATCCTTTT
CGCATCAAGAGAAAGCCCGTAGAAGCACCTCCTGGGTCAACGTGCGTGAC
TACAGTTGATCGAGATTTGAAGAAAAGTgtAAAAACCTTAAATGAGCATC
ACCATTGGCATATTGTGACGCTACGAGCAAAACGTCACAAAAATGGACTG
GAGTTCCGATATGAAGGAACCGAGGGATTCGGAGAGAACTTCATAGAGGA
CCCAACCATAAACTCTGCCATTAAAAGGGCATTTGAGCCTCGATTCAAAA
GAGGTATTTGAgtAAAAACCTTAAATGAGCATCACCATTGGCATATTGTG
ACGCTACGAGCAAAACGTCACAAAAATGGACTGGAGTTCCGATATGAAGG
AACCGAGGGATTCGGAGAGAACTTCATAGAGGACCCAACCATAAACTCTG
CCATTAAAAGGGCATTTGAGCCTCGATTCAAAAGAGGTATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:160696..163809 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 340-522:2932 |
| Aaloc | 193-339:2535 |
| Aaloc | 121-192:782 |
| Aaloc | 1-117:1 |
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