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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:1117497..1121499+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036647 ID=XLOC_036647|Name=XLOC_036647|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4003bp|location=Sequence derived from alignment at sc0000100_pilon:1117497..1121499+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACTGGACCGAGTTTACAATGAAGATCAATTATATTTCATCGAAGACAA
TTGGTCGACCATCATCCATGATGATTACTTCACAGCACGAATGAAAGAAC
AACAAGCTGTCATTTGGGAAATGATCAAAACTGAAAGTAATTACATTTGC
AGAATGAAACTTATACTTATGGTGAGTCACTCATAAAAACTCTGTGTAAC
ATTATGAAACCCCACGTCATAAACACTCTTTCAGTAGGAAAAATTATCCA
AGCGACCATAAATTCCCGTCATCGACAAACTACTGTACACTGAATTCCCA
TCATCGCTCtactgttaaaaaaaataaaagttgctCTCATTCCAGTTTTG
CACTTTCTTTGGTGGTTTCAGTCTTGTATCATTATAGTGTATTGGCTAAG
ATGTATACTGAGCCCCGATCCCATCCGCGGTTTGTGTTATCATAAGGGAG
ACTTACTTCACTCAATAGTTTTACTTATTACGATTTTTCTCTTTCCATCC
ATCACGGTGGCCTAAAGTTTAATTCTTTTCAACGCACCTTGACGTTTCag
gtttttcaacaaatttttcgaATTGCACAACGAGAAGGCGAACTCACCAA
CATCAAACGAGAAGAAATCTTCGCCAACATCGATCAAGTCTTTCTGGCCA
ATGATGAGATATGGAAGAAATATTTCATTGAAATCGTCAAAAAAGCTCGT
ATCAAAAGAGGACCAATCAAACCCAGTGAATTATTGGCCCCTTTTCATAT
GGTAAATGTTAATTGTGTTTATCATTGAATCAGGTTCATGTCTTTATGAA
GTTCAGCAGAGCATACTAGAAGAAGCTTTTTATTGAAGTACTGAAGTACT
GACTAGGACTTCAATGTctgagaaaaacactggaaaatgctggtaaaata
atgaaattgttCCCCCTTCCCCCGATGGTGGCAAATGTTGTGTGCGAACG
TCCGTCTTACCGACCTTTCCACTTACCTTcaacattgccactgggggAGA
GAGTGGTTAGAGCTTAGATTCTACTCTTGTATATCTCCATTTTCTCGTCC
ATGGTTGTAGAAGGTTATTTGATCTAGCTGAGTTAACTTGctaacttttt
tctttcttaggtGGAAGAGCTTTATAAACCCTACgtagaattctttttga
agCAAGAAAGCTGTTTGAATCGAATTCGCGATTATTCAGATCCAAACAAA
GAATCATGTGATAAAATGTTCAGGGCGTATCTTAACGTGAGTGAACTTct
tgttttttacattttcattgTAATGTTTTTGCAAGAGGAGTGCGCCTTTT
TATGTGCCTATTTTATTGAATTGTTTGCCCGAATGTCCTTCACAAGAGCC
AGGTCATTAGATCGTTTTTGAATCCCAATTGCACTTGATTTTTTGGCACC
TTTGGAATCAAATGATCTAGTTTTTAATCATTAATACAAATTGATTTGTT
TCTTTTCCAGTTCTGCGAGAATCTTCCACAATGTAGACGATATGAATTAG
TATCTTTGATGACGGAACCAATGCAGAGGATCACGAGATATCCCCTTCTC
ATGCAGTCCATCAAGAAAGCTACTGATAACGTGAAAGAAAAGGAACAACT
AGAAATACTGGTAAATaattaatacactttttttataacaaccagTATAG
TTTGGCTGGGCTGTTCtcaatcttttgaaattttcaggcttaaatgctTT
TACGATGTCCTCAAcacgcttagtttctttacttaaaaacttaaaatggg
tttaaaatccgttaaaatcagtactttttcAAATGGTGATGAAAActaag
tcaattttccagtggggttgaaattgtaagatatttttaccaccgggacg
aaattttaaccaaattttcaatgaataggcggtcccaccgggtctgtcaC
ACAGGGGTTTTAGAgtaataattttaatattttacaaTTTGTTACAGATA
CAGAAAATGGGATCGTTTATTCGAAAAATCAACACACGAATTCGAAAGAT
CGACGAAACTAAAGCTCTGAATAAAGTTTTAGATGAGTTTGAAGATTATA
ACACGTGGTCAGCTGGAAATGAAGATGTCTTATgggtaaaatatttcttt
tcaaacttggaatattttttataattgtgGATCTGTTTTGACCAACACTT
AATAAACTGAGTAAAGTAAAATTGGGCGGGTCTGCTTAAATCGTACTTCA
CAGTGACGAAATTCGATTTCCTATACCCTTATTACTGCTTTTCATCTCCC
CTGAGTTCCTTCTCGTCaaaaaaaGTCTCCAGTTAAACTCTCAGGTGCTT
AAGGTTGGTCACTTTTGGACAATGTCAACTAATAATTCCTGTTTCCTTCA
CAGCCATGTGTTGACTTCTTGAGAGGAGACATCGAGCATCTACCTACACG
TGAACAAAGATGTTACCTAACaagagaaaaagtcaaaattctgGACAAGA
AAGGTAAAAGTGAGATGAACATCGAAATGATTTTATTCACTGACGTCATT
GTATTTTCAAGACGTCGCAGCAGCTCCAAGAAGCTGGTTGTCGCCAAACA
ATTACATTTCCTGGATAAAGTGCAGTTCCATAAATCGGAAGTGTCTGCCA
CTTCACTTGTGGTGATTTATTTGGACGAATATGGGATGCTAGCCAACTCC
ATGATGATTGAAATGACAGAGGAATCGAGAGATGTGTGGATAGAAGCAGT
CTCGAAAGCACAGGTGAGATGAGAAATCCTTCTGTAATCTCCGCTGCGAT
TGATGTTAGATGGACCTTCGTTGATGTCTTCATTAATTGGCCTTAACCAA
TTAAGTTCCACTGGCATCAAATATTTCAGTTCTATACTGGCAGTGGTGGC
TACAACATCAAAATAGAGTGGGCGAGAGTCGATTCGGctcattctttcaa
aagttaacCCTCGTATAAGATACTCTCTTTAGTCCAAATCTTTCTGctat
tcgaacaaataagataagataagatcgAGAGATATGGAGTCGCTTATGAA
TTGTGAAATCACAATCTTATCATTTGTCATTTATTTATTATCACAGGATC
GATACGAAAAGGCCAAATCAGGGACTGGATCGACATTAGAATTCTTCCAA
GATTCAAGAGGTATCAATGATGACGAAATACACGGTATTAAACCTCCCCG
AAAAACGTCCGAACTCATCAATTCTGTCGAAGTCACGCGTAGATCTTCAG
TCAGTGTAAATAATGCGAAAAACACCGAGAAATATACCGAGAAGAGTATA
GAGAAAAAGGATGAGAAAAACACTGCTCCAGAATTACCTCCAAAAACTCG
AAAAACATCTACAGCAAGCAATGGTCAAGAGAAATCACCGAAATCTCCGG
TAAAAAGTTATGATAACCGAGCCCAAGATTTGGAAGAAGACACGCCAGGA
CTTAATCGAAGAAGTGCTTCTTGGCTTTTGACAGATGAGAAACGTGTAAA
ATCTATACGATGTTTGCTGAGAGAGGATCTCTGGGGAGCCGGAAGGCCAA
AAGTCCGGTCTTCAAGTAGTTTCCGTAGTGATATATCAGACTCTGAATGT
GAAAATACAGGAGATTATCGAGATTCTCCAGACGTTTGCAGTCTTTCTTC
AGTTGATAGCGGTCCTCAAATGACTTCAGATAATCAATCGGACTTGAGTA
GAAACAATAGTCGTAAAAACTTACTAAAGCCAAATAACACAAAACTGAAC
TTGAATTCACCTACGGATAACAACGAAGCTCGGAAATCACCATGTCGGAA
AGTTAGTTCTTCGAGTACTGGGCTACCTGAAATAGCAGAACACATTTATG
CGGAAATCACTTTTATGTCACGTGACCAGGTTACAGATAAAAATCAAAGA
CGTTCACTAAAAAGTGACTCCAATAACAATTTAAAAACGCCTTcgccaaa
aacgaaagtgaaagtagatAAACCTTTCGAGGATGTTTTTACGGACAGCT
CAGGGTCCAGTCTAAATGGTGACTATGTGGATGACTACTTAGAAAATAAt
tga Coding sequence (CDS) from alignment at sc0000100_pilon:1117497..1121499+ >XLOC_036647 ID=XLOC_036647|Name=XLOC_036647|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4206bp|location=Sequence derived from alignment at sc0000100_pilon:1117497..1121499+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACTGGACCGAGTTTACAATGAAGATCAATTATATTTCATCGAAGACAA
TTGGTCGACCATCATCCATGATGATTACTTCACAGCACGAATGAAAGAAC
AACAAGCTGTCATTTGGGAAATGATCAAAACTGAAAGTAATTACATTTGC
AGAATGAAACTTATACTTATGGAACTGGACCGAGTTTACAATGAAGATCA
ATTATATTTCATCGAAGACAATTGGTCGACCATCATCCATGATGATTACT
TCACAGCACGAATGAAAGAACAACAAGCTGTCATTTGGGAAATGATCAAA
ACTGAAAGTAATTACATTTGCAGAATGAAACTTATACTTATGgtttttca
acaaatttttcgaATTGCACAACGAGAAGGCGAACTCACCAACATCAAAC
GAGAAGAAATCTTCGCCAACATCGATCAAGTCTTTCTGGCCAATGATGAG
ATATGGAAGAAATATTTCATTGAAATCGTCAAAAAAGCTCGTATCAAAAG
AGGACCAATCAAACCCAGTGAATTATTGGCCCCTTTTCATATGgtttttc
aacaaatttttcgaATTGCACAACGAGAAGGCGAACTCACCAACATCAAA
CGAGAAGAAATCTTCGCCAACATCGATCAAGTCTTTCTGGCCAATGATGA
GATATGGAAGAAATATTTCATTGAAATCGTCAAAAAAGCTCGTATCAAAA
GAGGACCAATCAAACCCAGTGAATTATTGGCCCCTTTTCATATGgtGGAA
GAGCTTTATAAACCCTACgtagaattctttttgaagCAAGAAAGCTGTTT
GAATCGAATTCGCGATTATTCAGATCCAAACAAAGAATCATGTGATAAAA
TGTTCAGGGCGTATCTTAACgtGGAAGAGCTTTATAAACCCTACgtagaa
ttctttttgaagCAAGAAAGCTGTTTGAATCGAATTCGCGATTATTCAGA
TCCAAACAAAGAATCATGTGATAAAATGTTCAGGGCGTATCTTAACTTCT
GCGAGAATCTTCCACAATGTAGACGATATGAATTAGTATCTTTGATGACG
GAACCAATGCAGAGGATCACGAGATATCCCCTTCTCATGCAGTCCATCAA
GAAAGCTACTGATAACGTGAAAGAAAAGGAACAACTAGAAATACTGTTCT
GCGAGAATCTTCCACAATGTAGACGATATGAATTAGTATCTTTGATGACG
GAACCAATGCAGAGGATCACGAGATATCCCCTTCTCATGCAGTCCATCAA
GAAAGCTACTGATAACGTGAAAGAAAAGGAACAACTAGAAATACTGATAC
AGAAAATGGGATCGTTTATTCGAAAAATCAACACACGAATTCGAAAGATC
GACGAAACTAAAGCTCTGAATAAAGTTTTAGATGAGTTTGAAGATTATAA
CACGTGGTCAGCTGGAAATGAAGATGTCTTATggATACAGAAAATGGGAT
CGTTTATTCGAAAAATCAACACACGAATTCGAAAGATCGACGAAACTAAA
GCTCTGAATAAAGTTTTAGATGAGTTTGAAGATTATAACACGTGGTCAGC
TGGAAATGAAGATGTCTTATggCCATGTGTTGACTTCTTGAGAGGAGACA
TCGAGCATCTACCTACACGTGAACAAAGATGTTACCTAACaagagaaaaa
gtcaaaattctgGACAAGAAAGGTAAAAGTGAGATGAACATCGAAATGAT
TTTATTCACTGACGTCATTGTATTTTCAAGACGTCGCAGCAGCTCCAAGA
AGCTGGTTGTCGCCAAACAATTACATTTCCTGGATAAAGTGCAGTTCCAT
AAATCGGAAGTGTCTGCCACTTCACTTGTGGTGATTTATTTGGACGAATA
TGGGATGCTAGCCAACTCCATGATGATTGAAATGACAGAGGAATCGAGAG
ATGTGTGGATAGAAGCAGTCTCGAAAGCACAGCCATGTGTTGACTTCTTG
AGAGGAGACATCGAGCATCTACCTACACGTGAACAAAGATGTTACCTAAC
aagagaaaaagtcaaaattctgGACAAGAAAGGTAAAAGTGAGATGAACA
TCGAAATGATTTTATTCACTGACGTCATTGTATTTTCAAGACGTCGCAGC
AGCTCCAAGAAGCTGGTTGTCGCCAAACAATTACATTTCCTGGATAAAGT
GCAGTTCCATAAATCGGAAGTGTCTGCCACTTCACTTGTGGTGATTTATT
TGGACGAATATGGGATGCTAGCCAACTCCATGATGATTGAAATGACAGAG
GAATCGAGAGATGTGTGGATAGAAGCAGTCTCGAAAGCACAGGATCGATA
CGAAAAGGCCAAATCAGGGACTGGATCGACATTAGAATTCTTCCAAGATT
CAAGAGGTATCAATGATGACGAAATACACGGTATTAAACCTCCCCGAAAA
ACGTCCGAACTCATCAATTCTGTCGAAGTCACGCGTAGATCTTCAGTCAG
TGTAAATAATGCGAAAAACACCGAGAAATATACCGAGAAGAGTATAGAGA
AAAAGGATGAGAAAAACACTGCTCCAGAATTACCTCCAAAAACTCGAAAA
ACATCTACAGCAAGCAATGGTCAAGAGAAATCACCGAAATCTCCGGTAAA
AAGTTATGATAACCGAGCCCAAGATTTGGAAGAAGACACGCCAGGACTTA
ATCGAAGAAGTGCTTCTTGGCTTTTGACAGATGAGAAACGTGTAAAATCT
ATACGATGTTTGCTGAGAGAGGATCTCTGGGGAGCCGGAAGGCCAAAAGT
CCGGTCTTCAAGTAGTTTCCGTAGTGATATATCAGACTCTGAATGTGAAA
ATACAGGAGATTATCGAGATTCTCCAGACGTTTGCAGTCTTTCTTCAGTT
GATAGCGGTCCTCAAATGACTTCAGATAATCAATCGGACTTGAGTAGAAA
CAATAGTCGTAAAAACTTACTAAAGCCAAATAACACAAAACTGAACTTGA
ATTCACCTACGGATAACAACGAAGCTCGGAAATCACCATGTCGGAAAGTT
AGTTCTTCGAGTACTGGGCTACCTGAAATAGCAGAACACATTTATGCGGA
AATCACTTTTATGTCACGTGACCAGGTTACAGATAAAAATCAAAGACGTT
CACTAAAAAGTGACTCCAATAACAATTTAAAAACGCCTTcgccaaaaacg
aaagtgaaagtagatAAACCTTTCGAGGATGTTTTTACGGACAGCTCAGG
GTCCAGTCTAAATGGTGACTATGTGGATGACTACTTAGAAAATAAttgaG
ATCGATACGAAAAGGCCAAATCAGGGACTGGATCGACATTAGAATTCTTC
CAAGATTCAAGAGGTATCAATGATGACGAAATACACGGTATTAAACCTCC
CCGAAAAACGTCCGAACTCATCAATTCTGTCGAAGTCACGCGTAGATCTT
CAGTCAGTGTAAATAATGCGAAAAACACCGAGAAATATACCGAGAAGAGT
ATAGAGAAAAAGGATGAGAAAAACACTGCTCCAGAATTACCTCCAAAAAC
TCGAAAAACATCTACAGCAAGCAATGGTCAAGAGAAATCACCGAAATCTC
CGGTAAAAAGTTATGATAACCGAGCCCAAGATTTGGAAGAAGACACGCCA
GGACTTAATCGAAGAAGTGCTTCTTGGCTTTTGACAGATGAGAAACGTGT
AAAATCTATACGATGTTTGCTGAGAGAGGATCTCTGGGGAGCCGGAAGGC
CAAAAGTCCGGTCTTCAAGTAGTTTCCGTAGTGATATATCAGACTCTGAA
TGTGAAAATACAGGAGATTATCGAGATTCTCCAGACGTTTGCAGTCTTTC
TTCAGTTGATAGCGGTCCTCAAATGACTTCAGATAATCAATCGGACTTGA
GTAGAAACAATAGTCGTAAAAACTTACTAAAGCCAAATAACACAAAACTG
AACTTGAATTCACCTACGGATAACAACGAAGCTCGGAAATCACCATGTCG
GAAAGTTAGTTCTTCGAGTACTGGGCTACCTGAAATAGCAGAACACATTT
ATGCGGAAATCACTTTTATGTCACGTGACCAGGTTACAGATAAAAATCAA
AGACGTTCACTAAAAAGTGACTCCAATAACAATTTAAAAACGCCTTcgcc
aaaaacgaaagtgaaagtagatAAACCTTTCGAGGATGTTTTTACGGACA
GCTCAGGGTCCAGTCTAAATGGTGACTATGTGGATGACTACTTAGAAAAT
AAttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:1117497..1121499 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1147-2103:3047 |
| Aaloc | 787-1146:2354 |
| Aaloc | 649-786:1948 |
| Aaloc | 499-648:1461 |
| Aaloc | 373-498:1111 |
| Aaloc | 172-372:551 |
| Aaloc | 1-171:1 |
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